Busch Lab

ZMP

arvcfb

Ensembl ID:
ENSDARG00000061688
ZFIN ID:
ZDB-GENE-060526-60
Description:
armadillo repeat protein [Source:RefSeq peptide;Acc:NP_001122006]
Human Orthologue:
ARVCF
Human Description:
armadillo repeat gene deleted in velocardiofacial syndrome [Source:HGNC Symbol;Acc:728]
Mouse Orthologue:
Arvcf
Mouse Description:
armadillo repeat gene deleted in velo-cardio-facial syndrome Gene [Source:MGI Symbol;Acc:MGI:109620]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa33605 Nonsense Available for shipment Available now
sa13911 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa33605
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088222 Nonsense 624 918 8 15
ENSDART00000144035 None None 124 None 3
ENSDART00000146070 Nonsense 692 986 9 16

The following transcripts of ENSDARG00000061688 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 27933835)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 25689133
GRCz11 5 26289286
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGTGTGTATGTGTGCAGGTTTCGAGTTACTGTATCAGCCGGAGGTGGTT[C/T]GACTCTACCTGTCCCTGCTGACTGAGAGCCAGAACTACAACACGCTAGAA
Long Flanking Sequence:
CACTGCTGCTATCACCGTGTCCAAACTAACTGGGTATCCTCAAAATTACTTTGTTTTTTGCATTAGAGCCGACTGACCCTGAATCAGGGAAGGGGAGCTTCTTCTTTTGCATTTCCGACCTCAATTCATGTTTAAAAAAGACCTGCTGATTACGCTGACTGATATCAGAGCTGCTGCTATCAAGAAGCCAAGCGTCCATCAGACTATTGGATTTTTTTAGGCAGTTTGTCTATTGAGCTGCTCAATATATCTGTGAAAGTGGAGTGTCTTTGATTTTCTGTCTCTATTTCTTTGGGGTGATAATCACGCATTGTCCTACCCTGTTATTTTGTCCACTTTTCATTTCACCAGGTGCATCACAACACCGACAGCAGGAAACACAATCAATGTTTACCGCTCCCGAGCTAATCTGTGTGTTTGTGTCTGTGCTGGACTGTGTTTAGAGGTGTTTTGTGTGTATGTGTGCAGGTTTCGAGTTACTGTATCAGCCGGAGGTGGTT[C/T]GACTCTACCTGTCCCTGCTGACTGAGAGCCAGAACTACAACACGCTAGAAGCAGCAGCCGGTGCTCTGCAGAACCTCAGCGCTGGACAGTGGACAGTAAGTGTCTTCTCATTACAGTCCTGCACATATCCCAACTGAATCAGAAATCGATTCTTGATCCAATTCCAGGTCAGGGTTAGTTTTTATGACATTTATTTGCATTAATTCCCGATAGTGTTTTCTTTATCTTAAGCATATTTTATGATAAAATCTAAAACAATTGACACAAAACAGATGTCACTCATTTTATTTTCACTGTGCATGTCAATCTTTTGAGAACTACATTAACTTTAATCTAAATTTTTAATTTAATTAATTTTATTAATTAATTTAATTTATTAAATTTAAATTTATTTAATTTATTTATTAATTAATTAAATTTTTAAATAATAAATCTAATTAGAATAGAACTCTTAAGGCCCCTTCACACCGGGAAGCTTTCTGCTCACGTTTTCCGTCAAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13911
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000088222 Essential Splice Site 807 918 11 15
ENSDART00000144035 None None 124 None 3
ENSDART00000146070 Essential Splice Site 875 986 12 16

The following transcripts of ENSDARG00000061688 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 27925777)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 25681075
GRCz11 5 26281228
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGCTGAGGAACGCCCTVAYCAAGGATGGCTGGAATAAAACACACTTCCAG[G/A]TAGAGTCATAGTRAAAAATCTGGAAAAACTTTAATGTCTGGTGYACNNNN
Long Flanking Sequence:
AGTAAGCCATATGTTAAACAAACCTCCTCCATCCTCTCCACGCGTGACCTCATTTAAAGCTTCACATCATTTCTTACCGCTTCTGCCCGAGTCTGATTTTACCCTCAAAACTAAATATTGATTGTGAGAGATTAACTTTTTAAAGAGTACACGCGCGACCAGAGAGCGTTTCTCTATCTCTTTCTGACTCTGGAGATGCGGCTTTGAAGTCTCAGGCTCCTGGTAATTAAGTGAGGATCACAGGAAAAGCTAACGAAGTGAAAAGAGAGGAATCTGTGGCCACAGGGGTTGGAGATTGGAGCCGTGGTGACTGGATGACTTTGAATGTGAGAGTTATTCCAGCGGGCTCAAGATCCCTCCTAACTCTGTGTGTGTTTATGCGTTGCAGCCAGTCGGCAAGGGAGACCAAAGCTGCTTCCCATGTTCTGCAGACGGTTTGGAGCTATAAGGAGCTGAGGAACGCCCTCACCAAGGATGGCTGGAATAAAACACACTTCCAG[G/A]TAGAGTCATAGTAAAAAATCTGGAAAAACTTTAATGTCTGGTGTACTGACTAGTTGTATTACACGTTTCCAACATGCATTCTCCACATTCCACAAATATCCCAGTAGCAATAAATTCATAATGTTAAAAAAATGGTTAAAGGGAAACTGTAGTTAACCCAAAAAGGAACACTTACACACTTTTTACTCTTCCTCAAGTGATTAAAAAAATTATTTTGTTTGTTGAACACAAAAAAAAAACATACTAAGAAATCTGAAAACCTGTAACCATTGACTTTCATAGTAGGACAAACTAATGCTTTGCAGGTTTTCAGCTTTCTTCAAAATATCTTCTTTTGGGGTCAACAGCAAAAAGGACTCAAACGTGTGTGGAAAAGGTAAATTTTTGTGTTAACAATCCCTTTAAGTATTAAAAGACAAAATTTTATAAAGATATGCATGGGTAAGATTTTACTAAACAAAAAAAAGTTAAAACAAAAGTGGAGATTTCATTACAGTGGT
Associated Phenotype:
Not determined