ZMP
csgalnact2
Ensembl ID:
ZFIN ID:
Description:
chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:RefSeq peptide;Acc:NP_001119869]
Human Orthologue:
CSGALNACT2
Human Description:
chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:24292]
Mouse Orthologue:
Csgalnact2
Mouse Description:
chondroitin sulfate N-acetylgalactosaminyltransferase 2 Gene [Source:MGI Symbol;Acc:MGI:1926002]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa16668 | Nonsense | Available for shipment | Available now |
sa10705 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa16668
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087533 | Nonsense | 187 | 540 | 1 | 7 |
Genomic Location (Zv9):
Chromosome 13 (position 25804634)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 25450294 |
GRCz11 | 13 | 25580744 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTGAGGAAGGACCGGAGGGATGAGCTGGTKGAGGTGATCGAAGCTGGTT[T/A]GGATATTAKTAATAACCCTGAGGAAGACGATGGACAGGAKGACAACATTC
Long Flanking Sequence:
CCTGTTGGTGATACTGCTTCTCTTTGCTTATCTGCTGGAGTGCACACCGCCTGCAGACGTGAGCCAGGTGCTCCCAGGTCTGGCAGGAGATCCGTATGGAAAAGAGTATTACCAAGCCCTCTTACAGGAGCAGGAAGAGCGCCATCTCAGCCGAGCGGCCAGCCTGAAGAGGCAGATCGCACAGCTCAAACAAGAGCTCCAGGAGATGAGCGAGAAGCTGCGGGTGCTTCAAGAGAAGAAGGAGGGTCCCGGGCCGCAGAGTCTGAACGATGGCAGGGATCAAGAGCCAGGTGATCTCCTGGAGTATCTGCATTCACAGATCGACAAGGCCGAGGTGAACACTGGAGCCAGGCTGCCCAGTGAATATGCGCTGGTTCCCTTTGAGAGCTTCACCACCACTAAAGTGTACCAGCTGGAGATGGGTTTGACTCGCCATCCTGAGGAGAAACCTGTGAGGAAGGACCGGAGGGATGAGCTGGTGGAGGTGATCGAAGCTGGTT[T/A]GGATATTATTAATAACCCTGAGGAAGACGATGGACAGGAGGACAACATTCCTATGCAGAGGCAGACCTTCACTGAAAGCCAATTTTTTGAAGGTGAGAGCCGCACAGATGAAGTATGTGCTATCCCTGGTCAACAAATCTGTCTGTCTGTCTGTCTGTCTGTCTATCTATCTATCATATGAACAAAATAAAAAGTCTGCCGTTTCATAATTATGCTCTAGTGTTTATATCGTGGTGTCACTAAATACGTTCTCAAAGGTGCTGTTATTTAAAAAACATGCTAAGTCAACATGTTTATTTTTTTTAGCCCATCCAATGTTACTTTAGTCAATTATATTTCAGCATGACGGGTTGCTCTGGTGGAAAACAGTACATTTCACTCATTTATTTAAAATGGCTCTCAAAGCACAAGCCTCCAAAATGAGATGCAGATTCAGAGTTCTACATGACGTGGTTATTAATTAGCAAATAATATAATTTTTTTAATTTATTTATTTGACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10705
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087533 | Essential Splice Site | 416 | 540 | 5 | 7 |
Genomic Location (Zv9):
Chromosome 13 (position 25797195)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 25442855 |
GRCz11 | 13 | 25573305 |
KASP Assay ID:
2260-6450.1 (used for ordering genotyping assays)
KASP Sequence:
TATAGTTTATGGAAATCTGGAGTTTCCRCCACCCATTGAGAGTCAGCTGG[T/G]ATGTAATCATTATTTTTGTTGTTAGCTGAATTTGTAGCCTTSTAGTGATA
Long Flanking Sequence:
TTGCTTAATTTTATAAATTTCCATTGCAGTTTTCCTCCATGCATTTAGGGTAGGACTACCATTTTTTGGTAATGCTGTTTTTGACAGCCACCAACAAGATATTCATTAGATACTTGTCCCTTTTTCACCATTCCTCAGATATATGTCCAAAAAATGTAATTTTACAATCAAAGAGTATCACAGATTCAAAGATATTTTGTAAGGCATTGTATATATTTTTTCCAATATTTTGTAATAACCAGGCAGTCCCAGAAAATGTGATAGTGATTGGCCTTTTGATTTCCGCAGTTTCTCCAGCATATAGACGAATTTCCAGCATGATATAAAATGTACATTTCTAATAATGTATACCTTTTGTTTGTTTTAAAATGATACTAAAAGTTCCTTTTTTTTCTCTCTTGAAGGAAAGAGGGTTTTCTATCCGGTGGTTTTCAGTTTGTATAATCCAGCTATAGTTTATGGAAATCTGGAGTTTCCGCCACCCATTGAGAGTCAGCTGG[T/G]ATGTAATCATTATTTTTGTTGTTAGCTGAATTTGTAGCCTTCTAGTGATAGAAAAAAATGAAAAATATGTGTGTTGTTCATAGATTCATAAAAAAGATGCTGGGTTCTGGAGGGACTTTGGATTTGGCATGACTTGTCAGTATCGCTCTGATTTCCTCAATATTGGTAAGTCATTGTTGCTTTTGTAGATTGTAAGAAATCCTACTGTAATATAGTGCAATATAATATGCATTTTATTGAGTACTTGAATGCATTGGGATTAATTATTTTACATTTATTCTTTTCTAGTTCTTTATATTATTTGTAACATTTACATTACTACTAAAATAGATTTAGCAAATTGAGCAAAAGCAATGTTTAAAATAGATCAGGTATATTTATCTTGCCGGTTATTTTTTTACATTACATGAAAAATCTTTGTCAAACGCATCAGTTTATTGAAAATCCCCTACATAATATACAGTGGTCCCTCGCTATAACAGTTCACCTTTCGCAGTTTC
Associated Phenotype:
Not determined