ZMP
si:ch211-272f3.4
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate thyroid hormone receptor interactor 12 (TRIP12) [Source:UniProtK
Human Orthologue:
TRIP12
Human Description:
thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:12306]
Mouse Orthologue:
Trip12
Mouse Description:
thyroid hormone receptor interactor 12 Gene [Source:MGI Symbol;Acc:MGI:1309481]
Alleles
There are 11 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa23366 | Essential Splice Site | Available for shipment | Available now |
| sa9891 | Nonsense | Available for shipment | Available now |
| sa9786 | Nonsense | Available for shipment | Available now |
| sa10603 | Nonsense | Available for shipment | Available now |
| sa13854 | Nonsense | Available for shipment | Available now |
| sa8943 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa17600 | Essential Splice Site | Available for shipment | Available now |
| sa954 | Nonsense | F2 line generated | Not yet available |
| sa29080 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa23366
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087566 | Essential Splice Site | 719 | 2095 | 13 | 41 |
| ENSDART00000138552 | None | None | 32 | None | 3 |
| ENSDART00000145863 | Essential Splice Site | 677 | 2026 | 13 | 41 |
Genomic Location (Zv9):
Chromosome 18 (position 39614846)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 41284343 |
| GRCz11 | 18 | 41274535 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCACTTGTCTCTGTTTTGCTAGGCTGGTGGACAACTTTCAGCATGAAGAG[G/A]TGAGAAGTATTGCTAAGCACAAATAGCTAATTATGCAAACCTTAAGAGGG
Long Flanking Sequence:
TAGGGTAATTAGGAAAGTTATTGTATAATGATTGTTTGTTCTGTAGACTATTGAAAAAAAATAGCTTAAAGGGGCTAATAATTTTGTCCTTAAAATGCTGTTTAAAAAAATTTAAAACTGCTTTTATTCTAGTCAAAACAAAACATATTAGACTTTTTCCAGAAGAAAAAACATTATCAAACACTCTGTGGAAATTTCCTTGCTCTGTTTAACATCATCTGGGAAATATTTAAAAAAGAGATACATATTCAAAGGGGGGCTAATAATTCTGACTCCTACTTTATACAAGAGCAGATGACCATAAATACACATAAAATGACATCTAGTTGAAGCTCTCTTTTTTGACAGACCTTTGGTGTAAACAATAAAAACATCAGTTTCTGTCTTAAATGAACCAGCACTTACTTGCTATTATGTCTTTTGTTTTATAGGATAAAAAGTCTGTGGAAAGCACTTGTCTCTGTTTTGCTAGGCTGGTGGACAACTTTCAGCATGAAGAG[G/A]TGAGAAGTATTGCTAAGCACAAATAGCTAATTATGCAAACCTTAAGAGGGAAAAATGTGTGTTTTTCTGTTTTTAACAGCTGTTTTTATATTATTCAGTAAGATAAATCAGCTTGTGAGTCATCTCTAAATGTTTTCAGGAATATTAAAGTATTAGTTTGTCCCAATGTTGTTGTTTTATTTATTTTGGGGCTCATCTGTGGGAACTAAAATCTAAACTTCTGATTGTGAAAAAGTGTCTGTTGAATCATTCAATGTAATTTCAGAATTTTTACATTCTGGCTTACAGCATTCCGAGAGACAGCTGCAAAATTAAAACTGAATTGTGTGCGGATATATGGATATATATTTTGGTATAAGCATGTTCATAATGTACAGCATAGACAACATAATTTAAAAACCTATCTTGCTAATGGTGAATTATACCTTAACTAACCCACTTTTTTTTTTACTTCGTTCTATTTTATGGCCACTTGAATCAATACATATAAGCAAATTAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9891
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087566 | Nonsense | 722 | 2095 | 14 | 41 |
| ENSDART00000138552 | None | None | 32 | None | 3 |
| ENSDART00000145863 | Nonsense | 680 | 2026 | 14 | 41 |
Genomic Location (Zv9):
Chromosome 18 (position 39616927)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 41286424 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTGTGTGTGTGTGTCNNNNTGTCTGTCTGTCTGTCTGTCACAGAACCTGT[T/A]ACAGCAGGTGGCGTCACGGGACCTTCTGACCAACATTCAACAACTGCTAG
Long Flanking Sequence:
TAAACCACTTCTGATACCAAATGATCAACTAGAAGACAAGTTATTATTTAATTTAATAGTATTTATACAAGACTTTTGTCAGGTAGTGTAAAGTAGGGAAAACATATTGAAGCATTTTTAGAACCTATCATTCTTCAAAACATTACCTTTAGTTTTTAACAGATACAAGAAACACATTTACAAAAGTCAAGATAAGACTAAATAAATTGACAGTTTCAGTTTTTGGTGAACTCTCACTTTCAGTAGATTTTGCATTATGTAGATTTAGGATTATGATACAATAACTTGAAAAATATCTCTGATTTATTTCTAAATGCTATGTAAATCACTTAAAATTAATCACTGTGCTGTGTTTTGTTTGTTTGTTTGTTTGTTTGTGTGTTTGTGTGTTTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTTTGTCTGTCTGTCTGTCTGTCACAGAACCTGT[T/A]ACAGCAGGTGGCGTCACGGGACCTTCTGACCAACATTCAACAACTGCTAGTACTCACTCCACCTGTGCTCAGCTCTGGCATGTTCATCATGGTAGTGCGCATGTTTTCTCTCATGTGCTCCAACTGCCCATGTCTGGCTGTGCAGCTCATGAAGCAGAGTAAGTCACTCGCATACACACTCTAACCCTGCAGTTTACTATAACAAAAAGCACTATTAAAGAAAGCGTGTGGTTCTTAATTAAGGAGTAATTGACAAGAGGCCACTGACTTATTACGCCCGAGTACATTATTTTCTAGTTTTTCAACAGACCAGAGTCAATTATTCCACTTAAAGTATGGTTTAATACTTTAATAACACACCTAAAGCATTGCATTTTGAGATGTTTGTAAGTTTTTTTTTTTTTTGTTCTCTACTGTGTTTAGTACTAGTTTCTCATCCAAAGCTTGTTTATTTTCTATTATTGTTTTAGTTTATTTGTTATTATTATTTAAAAGAACTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9786
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087566 | Nonsense | 1101 | 2095 | 20 | 41 |
| ENSDART00000138552 | None | None | 32 | None | 3 |
| ENSDART00000145863 | Nonsense | 1032 | 2026 | 20 | 41 |
Genomic Location (Zv9):
Chromosome 18 (position 39623221)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 41292718 |
| GRCz11 | 18 | 41282910 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCTCTCCAAGTTTCCAGCACAGCATGGACGACKCGCTGGACCTCAGTCCA[C/T]AGGGGTATAAAACCACTCTGACATACACAGTTATCGATCTAGAGTTTAAA
Long Flanking Sequence:
TGCTTGTCTTTAGTTAATTCTCATTCTGTAATTATGTTCAAATGTTTCTCTTCTGCTTGTGTGTAGCCACATAGCTTCCATGCTGTCCAGTCAGGACCTGAAGATTGTAGTGGGCTCTCTGCAGATGGCTGAGATCCTCATGCAAAAGCTACCAGATGTGTTCAGTGTTTATTTCAGACGAGAAGGTACTGGATCTGATTTTTATGAGCTAACTGAATTGTTCTGCAATTAAAGTGCAAACATCATTTACATCATCTTTAATTGCACTAATTCACCAAATGTCGCTCTTGTTCTGTTCAGGTGTGATGCACCAGGTAAAGAACTTGGCTGAATCTGAAGTGTTCCTCACCAGCCCTCCGAAAGCGTGCACAAGTGGCACAGCAAGTCTTTGCACCACCACCATCACCACAGCAACCACTACAGCTGCCTCTAACGTCACACCTGACCTGGGCTCTCCAAGTTTCCAGCACAGCATGGACGACTCGCTGGACCTCAGTCCA[C/T]AGGGGTATAAAACCACTCTGACATACACAGTTATCGATCTAGAGTTTAAACGCATGACATGAGTCACCTGGTTTGCAAAGTTTTAAAAATAGATCCGTCTTCTATAGTAGGTTGAGTGATGTTCTGAAAAGAAAACGCCTCCCTAAAAGAGGACCAAGGCGCCCCAAGTACTCGCCACCCAGAGATGATGACAAAGTGGATAATCAGGGTATGTGTTAAAAAAGAATTAGTACTTGGAATCTTCATGTTTTGTATTCGTATCATTTTAAGGGTGCTTTCACACATGTAGATTGATTCTTTTGTTCCGAAACAGGGATTAAAATTGTTAGTGTTTATTTTTGTTTTTGGTGTGGTTCGCTTTTATGCGGCAAAGTTTCTAAATGGACCAAAACAGCTAAAACAAGTCACGTGCGAGTAAACTCTCCTCACATTGGTCAGAGTCCCACTTAGCTGTCATGCGTACTTATTTTAATTTATGACGATCAGCAATAAGACAATAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10603
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087566 | Nonsense | 1339 | 2095 | 25 | 41 |
| ENSDART00000138552 | None | None | 32 | None | 3 |
| ENSDART00000145863 | Nonsense | 1270 | 2026 | 25 | 41 |
Genomic Location (Zv9):
Chromosome 18 (position 39627799)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 41297296 |
| GRCz11 | 18 | 41287488 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CACTGCTTGCATTGGTGCACAAGATGAACAACTGCCTTAGTCAGATGGAA[C/T]AATTTCCTRTTAAAGTGCATGATTTCCCCAGTGGAAATGGCAACGGAAGC
Long Flanking Sequence:
AGAAGACTTTTTTATGAAAGGAACTCTTAAGGACATTTTTAACAAAGTGAAACCAGAAAAGATTTTAGAATTTTTATCATGTATTAACACAAAAAATCTTATTTAATATATGTTTTATTTTGTTTGTTGGTTTTTAAATTGTATATTTATTGTTGAAAGATTCCTGCCATGAAAATAGCCTTGGTTGCTGACATGGCATTAAATAAAAAAAAAACACATACATATAAATAAAATAAAAATAAATACACCTAGCAGCTCATAAGGGCTTGTAACAGTGGTTGGGTGTTACACTTTTCCTTTGTCACCGAATATATTTGACATGTTTATTGGGTCATTTTTTTTTAAATAGTAGTCATTGGTGTGATCAGTGTGACTCATTATTTATGCTATATGTGATTCAGATACCAGGGCAGGAACCTCCGGGACGTTTGGACCCAACAGAGAATGGCCCACTGCTTGCATTGGTGCACAAGATGAACAACTGCCTTAGTCAGATGGAA[C/T]AATTTCCTGTTAAAGTGCATGATTTCCCCAGTGGAAATGGCAACGGAAGCAGGTAATGACAACTGCACTTCACTCTTTAACCCTCCTGTTTTTATAAATGCATCAATTTATCTTTGACTGCCTCATTATGCAAACATTTTTTTCCATGTTATTTTTTCAACCTAGTTTCTTAACCTTTACCTCATATATACAGTATTTTTATATATGTTACTGCCTTCCAACTATGTGTCCGGGGTAGGAAATTACCCAGCTGTTCATAAGTTTGTTCTGAAACTAGGGGCTGGGTAACTACTAGCTAGTTTGTTACTAAATTTGTTCTTACTCTGGTTGAAGTTATTAGGTCGCAAAGTCTTGAGTAATTCAATATGTCTACGCGAATGATGTAATATCGGAAAAAAAAACCCATTAAAACATTAAACTGCTTTAAAATTCTGCAACTATTTTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13854
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087566 | Nonsense | 1372 | 2095 | 26 | 41 |
| ENSDART00000138552 | None | None | 32 | None | 3 |
| ENSDART00000145863 | Nonsense | 1303 | 2026 | 26 | 41 |
Genomic Location (Zv9):
Chromosome 18 (position 39629730)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 41299227 |
| GRCz11 | 18 | 41289419 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACAGGGGTTCGCAGGCCCTGAAGTTCTTCAACACCCATCAGCTGAAATGC[C/T]AGCTGCAGAGACACCCAGACTGCACCAATGTCAAGCAGTGGAAGGGCGGC
Long Flanking Sequence:
CAATGAGCCATGGTCGACACAAGCTTAAACAGACTCCGTCGTCGTCTTCATGAACAAAATCTGCCGTGTCCTGTTGTTTGTTTTACGAGTCAGTCTAAAAACGCCAGCGTTTTCACTTTCTCCAGAGAGCTCCCATGCACTTGCTGTACGTCTATATTCGTTAGTTATTTACACATATTGCTAAAGAGCACACTCAAGACTTACAATACAAATGTGTTTATCATGTCAAAAACAAGCACATTTTACTGGGTTGTAGTATCTCTGCCCCTCTGCGGTACTTGTTTTAGTCTATTGCTACTCAATAGACTCGTTAATCCAAATTTAAAAACAATAAACATCATATTTAGTCAATTTTTTTTAAACAATTGAACCTGCTTTTCATCATGATTATAATTAGAAGCTGGCATGGCATTTCTGAGGGGGAAAATCTAATTATATTCTATTGTGTTTACAGGGGTTCGCAGGCCCTGAAGTTCTTCAACACCCATCAGCTGAAATGC[C/T]AGCTGCAGAGACACCCAGACTGCACCAATGTCAAGCAGTGGAAGGGCGGCCCGGTCAAAATTGACCCACTGGCCCTGGTGCAGGCCATTGAGAGATACCTTGTGGTTAGAGGTAAACTCACAAGAATCTAAACATAATTTTCCAGCTCTGTGGTTTTAGAGATCTCAGATGAGATGGTTGTTTTGTGCTGTTTCTACAGGATATGGAAGGATCAGGGAAGAGGATGAAGACAGTGATGATGATGGTTCTGATGATGAGATTGATGAATCTTTGGTATGGAGGTTTTCGTTTCATAATCATCTTCGGGCAGTAATTATTATAGCTGGATACTGGTTCAGAAGTCCTGATTTGCAAGCGCTCAATTATTATTTTTTCTTTCAATTTTTAAACAAACCAGACCATAAAACACTTTTAAACCGTAGCATAAAACAAAAAGACCTATAATACAAATTCCAAAATCACCAGATACAGTCTTATTTACAATTATAAGAATTTATGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa8943
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087566 | Essential Splice Site | 1434 | 2095 | 28 | 41 |
| ENSDART00000138552 | None | None | 32 | None | 3 |
| ENSDART00000145863 | Essential Splice Site | 1365 | 2026 | 28 | 41 |
Genomic Location (Zv9):
Chromosome 18 (position 39632050)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 41301547 |
| GRCz11 | 18 | 41291739 |
KASP Assay ID:
2261-2526.1 (used for ordering genotyping assays)
KASP Sequence:
TGTTTTCTTCCTCAACATTAAAACTSTGGACCTCTAACCATTTTYCCAAA[G/A]GCTGCCCAGTTCCTGAATTCTGGGAGTGTACGACACAGGCTGCAGTTCTA
Long Flanking Sequence:
ACTCATGGTGCATTAACTAATGTTAACGAGCATGGACTTGGATGTTAATAATGCATTTGTAAATTCTCAATAATGATTAATAAATGCTGTACATGTGTTGTTCATGATAAGTTAATGTTAGTTAATGCATTAACTAATGAACCTTATTGTAAAGTGTTACCAAAATATTATAGTCTCTTTTTTATTATAAAAATGGTGAACTGTACACTGTTATTTGCCACTATTTACTTGCATTGAATATTCAGATAACCTGCTACATGATTTGTAAATAGCACATTTTTTGCGCAAATGTAACTAAATGTTAACTTTTAAAAAAATATGATTCATAGTTATAATACAGATGAAATTACTCTTCAGACTGGAAAAATGTTATAGCGTAGCATATACCTTACACTATTTGTAAAGTAGTTGACTAGCATTTCATTTTAAACTTCTCGGTAACCATCCCAGTGTTTTCTTCCTCAACATTAAAACTCTGGACCTCTAACCATTTTCCCAAA[G/A]GCTGCCCAGTTCCTGAATTCTGGGAGTGTACGACACAGGCTGCAGTTCTACATAGGGGAGCACCTGCTGCCGTACAACATGACTGTTTATCAGGCTGTCAGACAGTTTAGTTTGCAGGCCGAGGAAGAGAGAGAGAGCACAGATGATGAAGCGAACCCTCTGGGACGTGCTGGCATCTGGACCAAAACACACACTGTATGGTACGCAATTTACTAGCCTTTCACTCTTCAGAAGCGAAGAGCTTTTTCAGTGAATGCATCATTTCTGCAAGCTTTTTTGTACAGCTGCATGATCAATGGTTAAACAATAATAATCAAACACCCCATGTTATTAATTGTAAATAATTACAATTAGCATGGTTATTAGGGCTGCACAATATTTTGTTTCAGCATTGTTATCACAATGTGAGTGTCTGCAATAGTCACATTGGAATTATATTGGAATTATAGTTGATCAACAATTGAGAATACAAGAGAATTGTGGAGTCATTGCATATAACC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17600
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087566 | Essential Splice Site | 1500 | 2095 | 28 | 41 |
| ENSDART00000138552 | None | None | 32 | None | 3 |
| ENSDART00000145863 | Essential Splice Site | 1431 | 2026 | 28 | 41 |
Genomic Location (Zv9):
Chromosome 18 (position 39632252)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 41301749 |
| GRCz11 | 18 | 41291941 |
KASP Assay ID:
2261-2527.1 (used for ordering genotyping assays)
KASP Sequence:
CGAACCCTCTGGGACGTGCWGGCATCTGGACCAAAACACACACTGTATGG[T/A]ACGCAATTTACTAGCCTTTCACTCTTCAGAAGCGAAGAGCTWTTTCAGTG
Long Flanking Sequence:
GTACACTGTTATTTGCCACTATTTACTTGCATTGAATATTCAGATAACCTGCTACATGATTTGTAAATAGCACATTTTTTGCGCAAATGTAACTAAATGTTAACTTTTAAAAAAATATGATTCATAGTTATAATACAGATGAAATTACTCTTCAGACTGGAAAAATGTTATAGCGTAGCATATACCTTACACTATTTGTAAAGTAGTTGACTAGCATTTCATTTTAAACTTCTCGGTAACCATCCCAGTGTTTTCTTCCTCAACATTAAAACTCTGGACCTCTAACCATTTTCCCAAAGGCTGCCCAGTTCCTGAATTCTGGGAGTGTACGACACAGGCTGCAGTTCTACATAGGGGAGCACCTGCTGCCGTACAACATGACTGTTTATCAGGCTGTCAGACAGTTTAGTTTGCAGGCCGAGGAAGAGAGAGAGAGCACAGATGATGAAGCGAACCCTCTGGGACGTGCTGGCATCTGGACCAAAACACACACTGTATGG[T/A]ACGCAATTTACTAGCCTTTCACTCTTCAGAAGCGAAGAGCTTTTTCAGTGAATGCATCATTTCTGCAAGCTTTTTTGTACAGCTGCATGATCAATGGTTAAACAATAATAATCAAACACCCCATGTTATTAATTGTAAATAATTACAATTAGCATGGTTATTAGGGCTGCACAATATTTTGTTTCAGCATTGTTATCACAATGTGAGTGTCTGCAATAGTCACATTGGAATTATATTGGAATTATAGTTGATCAACAATTGAGAATACAAGAGAATTGTGGAGTCATTGCATATAACCATATCAGACTGAAACTTTATAATTTGCATGTGTTTTAACGGCATTTTAAGAAAGTGAAGCATTCGGGCACAATAACGTACAACATTTGCAACTTTTAATAAAGAACATTAGTGAATTATTAATACAATGAAGTCTGTACAGTGTTATTTTACAGGACATTATCTGAATGCTGTTTGACTCTTCGGAAAACCATAAAGCACTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa954
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087566 | Nonsense | 1535 | 2095 | 29 | 41 |
| ENSDART00000138552 | None | None | 32 | None | 3 |
| ENSDART00000145863 | Nonsense | 1466 | 2026 | 29 | 41 |
Genomic Location (Zv9):
Chromosome 18 (position 39634270)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 41303767 |
| GRCz11 | 18 | 41293959 |
KASP Assay ID:
554-0859.1 (used for ordering genotyping assays)
KASP Sequence:
AGAGGGGTCGAGCACAGACGGCACCCACTAAAACCTCCCCTCGAAATGCC[A/T]AGAAACAGGACGAACTGTGGCATGGTATGGAGATATCNNNNNNNATTTTTAACAAAG
Long Flanking Sequence:
AGTTTTGTGTTACATATAAACACTAATGTCTGAAATTTAACTGCATCTTGACACTATAAATAAAGGTTTAATTATTGCGTCAGTAGGTGGCAACATTGAGTTATTAAAAAAATGAATAGGTCCTTCAAGCGATTCTTCTAGAAACACTGATTCATCCAGCAATATAAAAGTATCTCATTCATTTAAAGTGAAATTTAAAAAAATAATTGTAATAGCATAATTGTACATCTGCGTCAAAATAAATTGCGAGAAACCTTTATTAAATTAGTTATTTTTAATTTTTGTTTTCAATTGTGAGAAAATTGTGATTTCTATTTTAATTTAATTCAGTTTATCAAGAATCATGTGGCTCTACCTTTTTGCATTTGCAGTGTATGTCAATATGTGTATCTTGCAGGTATAAGCCAGTCAGAGAAGATGAAGAGGGCTGTAAAGACGCTGTAGGAGGGAAGAGGGGTCGAGCACAGACGGCACCCACTAAAACCTCCCCTCGAAATGCC[A/T]AGAAACAGGACGAACTGTGGCATGGTATGGAGATATCATTTTTAACAAAGATCAAATGTGTTTTGTTGTTTCGTAATGAACTGCTTTCAATCTTTTTTGCGTGTGTGTTTTTTCAGAGGGTGTGTGTCCCAGTGTGGCAAACCCATTAGAGACATACCTCATTTGTGATCCTCCAGAGGGCATCACTTTTGATGACCCTTCAATGGAGGTGATTCTGCTGCTGAGGGTCCTGCACTCCATCAGTAGATACTGGTTCTACCTGTACGATGTAAGTAAACCATGCTAGAGGATACAATTTAACTGTGTGAATCTCATGCTTCACCCCAGAAAAAATGAAAGATGTTAAACTTTACTAAAGAAAAAATTAACTTTTAGAGGCAATTTTTTGAGCACATTTAAAAAAAAAAAAAAAGAAATAGATTATTTTCATGATAAATAAATACAGACTGGTACAATCTTGATGCTGGAAAATGTCTAGTGAAAGTATACAATTATATATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa29080
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087566 | Essential Splice Site | 1593 | 2095 | 30 | 41 |
| ENSDART00000138552 | None | None | 32 | None | 3 |
| ENSDART00000145863 | Essential Splice Site | 1524 | 2026 | 30 | 41 |
Genomic Location (Zv9):
Chromosome 18 (position 39634540)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 41304037 |
| GRCz11 | 18 | 41294229 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTGAGGGTCCTGCACTCCATCAGTAGATACTGGTTCTACCTGTACGATG[T/C]AAGTAAACCATGCTAGAGGATACAATTTAACTGTGTGAATCTCATGCTTC
Long Flanking Sequence:
ATTTTTAATTTTTGTTTTCAATTGTGAGAAAATTGTGATTTCTATTTTAATTTAATTCAGTTTATCAAGAATCATGTGGCTCTACCTTTTTGCATTTGCAGTGTATGTCAATATGTGTATCTTGCAGGTATAAGCCAGTCAGAGAAGATGAAGAGGGCTGTAAAGACGCTGTAGGAGGGAAGAGGGGTCGAGCACAGACGGCACCCACTAAAACCTCCCCTCGAAATGCCAAGAAACAGGACGAACTGTGGCATGGTATGGAGATATCATTTTTAACAAAGATCAAATGTGTTTTGTTGTTTCGTAATGAACTGCTTTCAATCTTTTTTGCGTGTGTGTTTTTTCAGAGGGTGTGTGTCCCAGTGTGGCAAACCCATTAGAGACATACCTCATTTGTGATCCTCCAGAGGGCATCACTTTTGATGACCCTTCAATGGAGGTGATTCTGCTGCTGAGGGTCCTGCACTCCATCAGTAGATACTGGTTCTACCTGTACGATG[T/C]AAGTAAACCATGCTAGAGGATACAATTTAACTGTGTGAATCTCATGCTTCACCCCAGAAAAAATGAAAGATGTTAAACTTTACTAAAGAAAAAATTAACTTTTAGAGGCAATTTTTTGAGCACATTTAAAAAAAAAAAAAAAGAAATAGATTATTTTCATGATAAATAAATACAGACTGGTACAATCTTGATGCTGGAAAATGTCTAGTGAAAGTATACAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACATTTTTAAAAAAATAATAAATATGTACACAGTTTTTTTAAATATAGTAATACAGGAAAAAGTGTTGAAACATTTATTAAAACCATTTATTTATTTTATTTTTTCCCAAATAAAACTATTATTTATCTTATTGTAAATAAACTTCTTATTGGAATAGATTCAGATATATTCATTAATGATGCAAAAATATGAAATGAGACTAAA
Associated Phenotype:
Not determined