ZMP
cdh18
Ensembl ID:
ZFIN ID:
Description:
cadherin 18, type 2 [Source:RefSeq peptide;Acc:NP_001070203]
Human Orthologue:
CDH18
Human Description:
cadherin 18, type 2 [Source:HGNC Symbol;Acc:1757]
Mouse Orthologue:
Cdh18
Mouse Description:
cadherin 18 Gene [Source:MGI Symbol;Acc:MGI:1344366]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa32933 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa32933
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000025562 | None | None | 790 | None | 11 |
| ENSDART00000099157 | Nonsense | 105 | 108 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 2 (position 28973121)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 29274756 |
| GRCz11 | 2 | 29258289 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAGGTGTGCTTAAACCATGCAGGCGAGCTGAGCTGCTGGGTCTCGTGTG[G/A]TTTGTTAAGTGAACTGTTCCTTGAAAGAGCACAGTTTTAACCAGAGACAA
Long Flanking Sequence:
AACACGTCTCGCTCTCGGCCCACGATGTGAGTGCTGCCCGCTGGGTCTCTGCGACAACAGGATTTTAAACCATGGCCATCTGCCAAGTCCTGCGAACTGGTTCGATTGGCATCTAGAGCCGCCCACCACAGGAGAGAGACCTCTGGGTGAGCGAGAGCAGGAGTTCAAACATTGCGACTCTTTAACATGAGAGCAGCCAGCAGCCCTGCCTGTCTGTCCCCTCTGCTGCTGTGCCTATGTGTGCTCCAGAGGAGCTATGGGACCCCTTCTCCACCCAGCCCCACATTCAGCCACAACCAGACCAAACTGCCCAACGGCGACAAGGACTCGCACCATCGCCCCAAGCGAGGTTGGATCTGGAATCAGTTTTTCGTTTTGGAAGAGCACATTGGGCCAGATGCCCAGTATGTGGGGAAGGTAAGAGCTTTTGTTGATTGTTTCGATCTGTGCTCAGGTGTGCTTAAACCATGCAGGCGAGCTGAGCTGCTGGGTCTCGTGTG[G/A]TTTGTTAAGTGAACTGTTCCTTGAAAGAGCACAGTTTTAACCAGAGACAATTGCTGCGCATCATGTTTTTGGATTGTAATTGAAATGCACCATGTCAGTGTGTTCCTGTAATGATATTTTCTTGGAAGCGAGTAAATAGTGCAGGTGACTAATCAGAAGCAAAATCCATGTTTCTCAGAACAGCATGTTTTTGTCAGAAAATTGATTTGGCTTGCAAATTGAACACTGACCTATGACATCCTTCCCCGTTAATAAGAACGTAATTTTTTGCCACTGTCGACTACAGCGAATGGAAGAGATCCAGATGTCTTTTCCCCCTCTGTTTAATCCATTGTCTTCATAGACAAGGTTTGAGACAGCTAACACATTGTTATGATAATCATTTGGAGCACCTTAAATTCTGCAACTCTGGACAAAATCCAGAGATCCCTCTGCGGCTTATAAACGTCAACAGTGGTACAATCAATTATTTTGCCCATTTCTTTCTGTGAAGACTGGCC
Associated Phenotype:
Not determined