ZMP
trpc1
Ensembl ID:
ZFIN ID:
Description:
short transient receptor potential channel 1 [Source:RefSeq peptide;Acc:NP_001185590]
Human Orthologue:
TRPC1
Human Description:
transient receptor potential cation channel, subfamily C, member 1 [Source:HGNC Symbol;Acc:12333]
Mouse Orthologue:
Trpc1
Mouse Description:
transient receptor potential cation channel, subfamily C, member 1 Gene [Source:MGI Symbol;Acc:MGI:1
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37817 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa37817
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000087034 | Nonsense | 292 | 766 | 6 | 12 |
| ENSDART00000139191 | Nonsense | 322 | 796 | 7 | 13 |
Genomic Location (Zv9):
Chromosome 24 (position 5934913)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 24 | 5822205 |
| GRCz11 | 24 | 5851534 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTTTTTGGTAATATGTTTTGTCATCTTCCCTCCTCCACAGTTTGTCGCC[C/T]AATCCAACTGTCAGCAGTTTCTGAATACGGTGTGGTTTGGCGAGATGGCG
Long Flanking Sequence:
GTTCTTCACTATGTATTTAAAATTTGAAAATGTATTTTACTGCAGTATTTTCCATGGAGTTTCAGCCTTCGCCTGCTGTTCCTGACGGTGCTTGTGTATACACAGTCTTTCATCTCGTTTTACACTTGAACAACTTAATGAACGCTAAAGTCTATTTAACGAACATTGATGCTGTTTAAGAAACCTTCTGAAATTGAAAATAGTCACATAAAGCGTTCACTGGAAGTTTATCAAAAGAGGAAAAACCCTAGCTGTGCATAAACGCTGTTGTGTAGCAAGTGCGTGTCAGAAGTTTAAATCTCTGCTCATCCCCAGTGAAAATCAATTGGATATGAATGTCGAAAAACGTCTTGATAAGCACTGCCAATAAGCTCTGATTATAAGCATGACTGAATATTGTCCTGGTGGCCACAAGCGACTTTCTTTTGTAAGAAAACACCCGATACATTTCTTTTTTGGTAATATGTTTTGTCATCTTCCCTCCTCCACAGTTTGTCGCC[C/T]AATCCAACTGTCAGCAGTTTCTGAATACGGTGTGGTTTGGCGAGATGGCGAGCTACCGCCGCAAACACACCTGCTTAAAGATCGTGTCTGTTTTGAGCGTGGCACTGCTGTGGCCCTTGCTGTCCATCTGTTACCTGCTGGGTCCCCGTTCTCGCGTCGGCCAGGTCATCCACACTCCTTTCATCAAGTTTATCATTCACAGTGCTTCTTACTTCACCTTCCTGCTGCTTCTGAACCTGTACTCGCTCATTTACAACGACAAGAAGAATATGGCTCCTGCGCTGCAATTCATAGACTACCTTCTCATTCTCTGGATCATAGGTGAGCATTGCCAGCATGTTTATCCACTCTTTGTAATATAGCAGCTATTTGCTTAAATAATTTAAGTTCATTTTTTCCTCATTATTATACACATAGCACCCCACATAACCAGAAAAACACAGAGTTGTTGACATTTTTGATTTATTAAAAAAGAGAAACTGAAATATGACACGGTCCTA
Associated Phenotype:
Not determined