ZMP

vps45

Ensembl ID:

ENSDARG00000061180

ZFIN ID:

ZDB-GENE-060503-526

Description:

Novel protein similar to vertebrate vacuolar protein sorting 45A (Yeast) (VPS45A) [Source:UniProtKB/

Human Orthologue:

VPS45

Human Description:

vacuolar protein sorting 45 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:14579]

Mouse Orthologue:

Vps45

Mouse Description:

vacuolar protein sorting 45 (yeast) Gene [Source:MGI Symbol;Acc:MGI:891965]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa14216	Nonsense	Available for shipment	Available now
sa45682	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa14216

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000086961	Nonsense	9	568	1	15

Genomic Location (Zv9):

Chromosome 19 (position 43937312)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	42847114
GRCz11	19	42416551

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GTAGAATATATATANNAAACGCCAAAATGAACGTGACTCTTGCTGTRAAA[C/T]AGTACATTTCCAAAATGATAGAGAGCAGCGGACCTGGGATGAAGGTGCTG

Long Flanking Sequence:

TTTTACTCTATTTAATTTTATCTATTTAATTTTTCTTTTAATATATATATATATTCATTTTAATCATGTATGTATTTTTTATTCAATAAAAATAATACATAATAGAAGCTAATAGTTAACAGCATCTGAAACGCTCTTTCGCCCTCACCAACATGGCGCCTCATTTACTCCGTTTTACGTAGCAGCCTTGAATTATGGGATATTTGTCATGTACTGCTACCAGATCAGTTACTACACAACACGACCATTCTAAACCCTCAAATCGTTTTAAATTCCAGCTGTTCCCAGATCAGAAGCAGACTGACGCCTCGCGTACACCGGAAGCACTAGTGGGTCTTCTCCCATTGTCAACAGTAAACTGTATACGTGAGTTTACTGATGAAAACTGCTTTATTCACCCTTTAAACAACATTGAAACCATCTGATAAATCGACTTATTCTCAGTAACACGTAGAATATATATATAAAACGCCAAAATGAACGTGACTCTTGCTGTGAAA[C/T]AGTACATTTCCAAAATGATAGAGAGCAGCGGACCTGGGATGAAGGTGCTGCTGATGGACAAGGAGACGGTGAGTCAATTTAGGATATGCCACTGTGTTTTAAAGGCTTTAAAGATCAATAATAAAAGCGCACATATGTATGAACCACAGATAAACTAGTACTTTGTATAGTATAAATAGCGTTTGCTGACCTGTCATGTGTCAAACAACTGAACTTTAACTCTGAAGTAAATGGCAGTCAGCAGGCTAACGTTACATTGAGGTAAAGTTTATATTCGGACTTTCGCGTCCAATAAAATAGTGAAGCAGAATTTAAAAAGGTTAGGGTTAATACAGGTTGATTATAACGACGTACTGTTATGGACAATGATATGTAATCTCAAGGGGCGACACGGTGACTCAGTGGTTGCTGGGTCAGATGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCCGTGTTGGTGTGGGTTTCCTCCGGGTGCTCTGGTTTCCCCACAGTCCAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa45682

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000086961	Essential Splice Site	312	568	9	15

Genomic Location (Zv9):

Chromosome 19 (position 43926189)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	42835991
GRCz11	19	42405428

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GAAAAAACCCAAGGACCAACAGAAGTTAGAGTCTATATCTGACATGAAGG[T/C]GAGTGGAGCACTGCTGAACTTAAATTAATACTCTTCACTGTAGCACATCT

Long Flanking Sequence:

TTATTGTACTTCTTGCTACAAAATTGTATTCTACTTCCACACTGTTTGTCTTTTCTGCTTTGTTTTGTATGTATATTCAAACAAAAAATATTCGAGCCTTTTTTGTATTGTTGATTGAAATTGTATAACATATATATACGCTCAATAAAAAAAAAAAAAAAAAAAAAAATAAATAAATAAATAAATAAAAAACTAAAATCAAATACTAGACGATTCTTAAATCATTGCCTCCATTAAATATTTATTTCAATTATTTATTTTTCTCTCTTCAAGTATTATGCTAAGAATATAACTTATTTTAGAAAACTAAAGAATGAGAAAAATACTAACTTCATTTTTCTTCTTTAGTGATTTTGTGTTTATGTGTTGTTTTTCTCTCAATAAGAACTTATACCTGAATTTTGGTGAGATTGGAACAAACATCAAGAACCTGATGGAGGATTTCCAGAAGAAAAAACCCAAGGACCAACAGAAGTTAGAGTCTATATCTGACATGAAGG[T/C]GAGTGGAGCACTGCTGAACTTAAATTAATACTCTTCACTGTAGCACATCTTAAAGAGACAGTTCACCCTAAAATGAAAATTTACTCACTATTTGCTCACCATCAAGTGGTTCCAAACCTTTAATGGTTACTTCTTAAACACAAATTAAGATAGTTTATAGAATATTAAAAAACAGGTAACAATTGACTTCCATATATTAGTAGTTTGATATACAGATGTCAGTGCTGTTCACTGTAGCATATCTTAAAGGGACAGTTCACCCTAAAATGAAAATGTACTCACTATTTACTCAGCACCAAGTGGTTCCAAACCTTCAATAGTTTTTTTTCTTTTGTTTAACACAAATGAAGATATTTTGAACAATGTTAGAAACTGGTAACATTGACTTCCATATAGTATTTGTTTTATGTACAGATATCATTGTTTACCGGCTTCTAACATTCTTCGAAATATCTTCAAAAGGATTTTCAGCCTAAAAAAGGATTTGTTGGATTTTCAAA

Associated Phenotype:

Not determined