ZMP
si:ch211-212m21.5
Ensembl ID:
ZFIN ID:
Description:
Collectin-12 [Source:UniProtKB/Swiss-Prot;Acc:A5PMY6]
Human Orthologue:
COLEC12
Human Description:
collectin sub-family member 12 [Source:HGNC Symbol;Acc:16016]
Mouse Orthologue:
Colec12
Mouse Description:
collectin sub-family member 12 Gene [Source:MGI Symbol;Acc:MGI:2152907]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa39850 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa39850
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000086863 | Nonsense | 195 | 720 | 5 | 10 |
| ENSDART00000130070 | Nonsense | 195 | 740 | 5 | 10 |
Genomic Location (Zv9):
Chromosome 2 (position 31143579)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 31444639 |
| GRCz11 | 2 | 31427857 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAACAGAAACGGCGAGACTCCAGTCAGATCTCCATGTACAGACAAGTGAA[C/T]AGGGCCAAAACAGCCACAGCATCAGCACTCTAAACTTTACCCAGACCCAG
Long Flanking Sequence:
AAGTTTATTAATGACACAAAAATGTACCATTTTTATTTATATTATTATTATTATTATGAGACCTCATCGCTTTTTATATTAACTATATGTTTTCTATTGAAAGCCTGTCAAGCGATGACTTTTTAAAATTAATGACAATGTACAGCCATTTATATTACTCACTGTAGTTGTACATTTAATGTGCAGATGATCAAACGGGAGAGAAGTCAGAAAATGCTACCAGTGAACTTCACTCATTCAAGTTGGAATTTCAGACATTGCAGAAGCAGCTCAGCGACGTTATTGTGAAGACTTCCAACAACAGAGCTGTTCTCAAAGAGCTACAGCTAGCTGGTGAGGACATGCAGAGTGGACATCTCTCGCTGCGAGACCTGCTGGAGAGCAATGCCAATGTCATCAGCAAAGTAAACCACACTTTGAACACATACAACAGTCTGATTGATGGATTAAAAACAGAAACGGCGAGACTCCAGTCAGATCTCCATGTACAGACAAGTGAA[C/T]AGGGCCAAAACAGCCACAGCATCAGCACTCTAAACTTTACCCAGACCCAGCAGAGGAACCTCATCAGCTCCCTCCAGAGATCAGTGGAGGACACTGGCCAGGCTGTGCAGAAGCTTAAGAATGACTATCAGAGCCTCCAGCAGGTGGCTAGGCAAACCAAAGCAGATGCTGATTGGCTGAGAGAGAAGGTGCAGAACCTTCAGGCTTTAGCGGCTAATAATTCTCTGCTGACTCGCTCTAACAGTGACTCTCTAGAGGACGTAACCTCTCAGTTAACCACACTGTCAGAGCAGGTCCAGAACACTTCGACCATCACTGACAGCCATGATCAGAGCCTGCGTGAGCTCATGGACCAGCAGCGAGATCATGATAATGCCACCTCCATTAGATTTGATGCATTAGAGGCACGTCTTGACAGCAATGAGGGGGAAATGGACCGCATAACAGGGAATGTTAGCTTTACCACGCAGCTGCTCAGAGCGATCAGTACAGACTTGAAT
Associated Phenotype:
Not determined