Busch Lab

ZMP

jarid2a

Ensembl ID:
ENSDARG00000060925
ZFIN ID:
ZDB-GENE-061218-1
Human Orthologue:
JARID2
Human Description:
jumonji, AT rich interactive domain 2 [Source:HGNC Symbol;Acc:6196]
Mouse Orthologue:
Jarid2
Mouse Description:
jumonji, AT rich interactive domain 2 Gene [Source:MGI Symbol;Acc:MGI:104813]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa16122 Essential Splice Site Available for shipment Available now
sa22844 Nonsense Available for shipment Available now
sa16781 Nonsense Available for shipment Available now
sa30687 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa16122
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000086333 Essential Splice Site 105 1171 3 18
Genomic Location (Zv9):
Chromosome 16 (position 27685084)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 25530771
GRCz11 16 25445803
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCAAAGAGCGCAACCATGAGTTCTCTATGGACGGGCCTGCCAGGAAGAAG[T/C]GAGTTTACTTAGACCTGCACTTTATTGTGGTTTTGTGTCATTCTGTGTTA
Long Flanking Sequence:
AATCAGTAAGGGGATAGATGAACTATTTATTTTCTATTTATCTATTTTATTTTTGCCCAATTTAACACTGAAATCTTAGATAAACGTAACAGGACACTATACACACTTTGATTTTGCTCTTTATTTCCTGTCAGTTCATTCTGAGTGTCCACTCATGTTTGTTCACCACAGTGCTTACACTTAGTGATTTGAAAAATCCTCTTCTCCATTTCAGAGACATTTTAAAGTGTTTCTGCTCCCTTTGGATTAGTTTATTTCTTGCGAACAGATCGGCTTAAGAACAGCATGGAGGAATTTGTTTGCTTTTCTGTTCATGTTTGCCTGTTTATATCTGAACCACATCTCCTTCCCCAGGCTCCTTTGCTAATGGTCATCTGAATGGATCGGGCACTAAAGCTGGCCTGTTTGTGGGAAGCTGTAAGTCAGAACGGACCCAGCATGCAGTGCAGAGCAAAGAGCGCAACCATGAGTTCTCTATGGACGGGCCTGCCAGGAAGAAG[T/C]GAGTTTACTTAGACCTGCACTTTATTGTGGTTTTGTGTCATTCTGTGTTAGTGCATGGTTAAAAAGAGCTTTAATGGATGAATAAATCATCATTCATGAACTAAGTGGGAAAATAGCAGTGAATGGACTGAAATGCTATCCCTTTATGTATCTTTCAGTGGTAAAAGATATAATGTTTCTTTCTAGGTTGAATCAGTGATTGTTCATCAGCAAAATGTAACTGGTTTTTGAGCTAATCAATGATGGATATCCTGCTTGGTTGATTCTTGTTTGAACATCAAGTGCTTGGAAGAAGCATCAAAGCACAACATATGCTCTTGGCCAATTAAAAATGACTTGCACAGTCAGGCTTTTTGCTTAGCTTTTATATATCAGACCCAAGTGCTTCCCTCCGCAGGTCTTCTGTATGATTAGATTAGCATCTCTTTTCCCACCAAATGATTCAGATCATTGTGCTTCTGTCCTTTTCCTTTTTATGGACTTTGAGTCAATAAACTGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22844
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000086333 Nonsense 374 1171 7 18
Genomic Location (Zv9):
Chromosome 16 (position 27716698)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 25562385
GRCz11 16 25477417
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACGGCTCAGTGGGACAGACACTTTCCCCCCGAGACGAAACGGACTTCGG[C/T]AGTCAAAGAGGCAGCTGGAGTTAGCCGGAGCAGAGGTCGAGGTGAAGAGG
Long Flanking Sequence:
TAGTCCAAAAAAATGAAAGAAAATGAGGGAATCAGTAGGGAATTGGTCTTTGGGTTTTAACAGCAGCACTCCATAACAGCCCTGAATTAGATAAAAGTAAAAAATGACACACAACAGCTTGAAGTATGTGTTTTATATACATGTTTACTGTTGTGTGTGTGAGTGAACTAAAAAGAAGCTTTTCTGTCATCCCTTAGGCCTCCAAAATGAACGGGACATCGGGAGCCTCCGCCGTCAGTTCTCGAAAGACGAGAGAACTGCGAACTCCCCCGACCAAAGCTGTGAAATACCCCAAGGGCCACGTGACGTACACCAAAGCCAGACTGCTCAAAGAGGCCAAGCTCAGCCTGAGCACACACACACACACACACTCTCAGACCTCCAACTCAGGAAAAGCCCAAACCAGCCACGCCAAGATGCAAAAACAGGTGCTATCACCAGCAACCGCTGGACGGCTCAGTGGGACAGACACTTTCCCCCCGAGACGAAACGGACTTCGG[C/T]AGTCAAAGAGGCAGCTGGAGTTAGCCGGAGCAGAGGTCGAGGTGAAGAGGGTCAAGGTGCACGTGGTTCCTTTGGAGACCCGCAGTAGGAAAGCAGCTCAGGAGACGCAGGCCAGACCGCAACCGGCGGGATCACAGCGGCCCAAACGGGCATCGGCCGGGAAGCTCATGTTCACTAAACAGATGCACTGCAAAGCCAGCGTTCTGGCCAAGAACAGCCCCACTACCTCAACACGAGACATTCTGAGACCAGCCAACTCCCCCAAACTATCAGAGACCCCCAGAACAAGCAATGCTCTAAAACAAGGCCATCCTTCAAATATGACTGAGCCCTTCTCATCTGAGCCCAAGGAGCGAGGCCGGCGCAGTGCCGAGATCACGGAGCTGCCCGTCTTTTATCCCAACACACATGAGTTTCATGACCCGTTGACTTTTATGGAGTTGGCACGGGGGCAGGCCGAGGCGTTTGGGTTGTTCCGGGTTGTTCCGCCAGCAGGCTGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16781
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000086333 Nonsense 840 1171 11 18
Genomic Location (Zv9):
Chromosome 16 (position 27732001)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 25577688
GRCz11 16 25492720
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGGCATGGATGGAATCTTAATGTCCTTTCCAATAACTCAGGATCCATCT[T/A]ACGTCATCTTGGTGCTGTGCCAGGTAACATTTCAACCATTTCCTGAGAGC
Long Flanking Sequence:
ACGTCAAATTATTATTTGTTGATCCTAAAACTTGGATAGGCGACAAGACTTTTGTCTGGTAGTATAATTAAACTAAATTACACCACAATAAAATACAATTATTATTCATTTAAATGTGTTTAAAACAACTCCTTCTCCACACCTGTTTGAGTTTCTTTCTTCTGTCGAACACACAGGAAGTATACTTAGGAATGCTGGGATAAAAACAGCTGTTGGCTTTTATTGTAATTTTTGTTTCCACTTTGTCTACTTTGTTTTCCCTCAGCATTCATCAGAATATCTTGTTCAACAGAAGAGTGAAATTCACAAAAGTTTAGTTTGATTAAAATAGAGAGAAAATTAGCATTTTGGGTAAACTATCCTATAAGATCTATTGTAAAGTGTTCATTAATTAAATTCATTGTGCATAAAACATTGTTTGCTTTCCCCTGATTTGTTTGTCTCGTTCTCAAGGCATGGATGGAATCTTAATGTCCTTTCCAATAACTCAGGATCCATCT[T/A]ACGTCATCTTGGTGCTGTGCCAGGTAACATTTCAACCATTTCCTGAGAGCTTTACATTCCACGCATGCAATAAAACACCTTGACGATCAAGTGTTAAATCATCATCCTGAAATGAATGTGTGCGTGTGTGTTTGTCTGAAGGGGTGACCATCCCCTGGCTGAACATAGGCATGGTCTTTTCTACCTCATGCTGGTGTCGGGACCAGAACAGCCTTCCGTATATTGATTATCTACACACTGGTGCTGACTGCATTTGGTGAGTCTTTATTTACAGCTGCCAGAAATGAGATGAAGGTGGGTGGAGCAGAATGTTTGGGCATGTTTGATGGTGACTGTGCTTCTTGTCTTCAGGTACTGTATTCCAGCTGAAGAGAAATCCAAACTTGATAAAGTAGTTCACACACTGCTACAGGCTAACGGCACTCCAGGGCTGGAGATGCTGGAGAGGAACATTATGGTGAGAGATCAACATTGTTTACTTTCTCTCTCAATGGGGCAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30687
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000086333 Essential Splice Site 1024 1171 15 18
Genomic Location (Zv9):
Chromosome 16 (position 27735118)
Other Location(s):
Assembly Chromosome Position
GRCz10 16 25580805
GRCz11 16 25495837
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAACAAGCAGCTCATGACTGCCGTCTCCAGTCTCTTCAGAGATCTCAGG[T/C]TTGTGGAAATCTGCTCTCACTGGACTCTTATTGTCACAACAACCACATCC
Long Flanking Sequence:
TATATGTTGTAAACAGGGGCATAATAGATCCACTTTAAGTCGTTCATCTTTCAGTAATCTGTAAAGAGAATGTTTTGAGCTGATGTTCCTGTGTCCTCCTCAGATTTCTCCAGAGGTGCTCCGTCGTAAAGGGGTGAAAGTGTACCGGACAGTGCAACACAGTGGCCAGTTCATGGTTTGTTTCCCAGGGACGTTTGTGGCTAAAGTGTGTTGTGGCTACAGCGTCTCAGAGACCATGCACTTTGCCAACCTCCAGTGGATGAAACTGGGCTATGAGGCAGCTAAGGTGACTGACACTTTACCTCTCATTCAGCTGCTTTCAGAAGTGAGCTTTAGCCAGTCTTTCACACTCGGGTGCCGCGTTTGCTTTGCAGGATCTGAAACGGCGTCGTATTGAGGAGCCTTTTTCAACAGAGAAACTGCTCTACCAGATCACCACATGTGAGCGGGACAACAAGCAGCTCATGACTGCCGTCTCCAGTCTCTTCAGAGATCTCAGG[T/C]TTGTGGAAATCTGCTCTCACTGGACTCTTATTGTCACAACAACCACATCCATCTTGGAATTTGACACAAAAAAAGACTTATAATTAATTATTATTAGTAGTAGTGTATAAATATTGATCATAAAGTACTGGGCAATTACCAACCGAGATAACAAGCTTTTCCTCTATCTTATCTATACACTAAAAAAAGCTGGATTCCGCACTGTTCCTTTATGTTGTCCCAAAACAAATGGATAACGTTAACCTAATTGTTTTTACAAATTGAAGTGGACTGAACATAAAACAATAAAGTTGTCCCCCCAAAAACTCATAAATTGTGTCGATCCAGCTTATTTTAATTAAGTAGTTTAAACAAGCAGCAACAATCATTCTTTGAATGTACCGTTATTCTCCAGTATGGGATAGCTAGCATCTGCACTAATATTTGCGTAAAGCAATCTGATTGGCTGACACTTCTGTTGTGCTTAAAGTTGAACATTTTTCAGCATCTGCCAAAGCAAC
Associated Phenotype:
Not determined