ZMP

si:ch211-197n10.4

Ensembl ID:

ENSDARG00000060893

ZFIN ID:

ZDB-GENE-060503-488

Description:

collagen alpha-2(VIII) chain [Source:RefSeq peptide;Acc:NP_001076370]

Human Orthologue:

COL8A2

Human Description:

collagen, type VIII, alpha 2 [Source:HGNC Symbol;Acc:2216]

Mouse Orthologue:

Col8a2

Mouse Description:

collagen, type VIII, alpha 2 Gene [Source:MGI Symbol;Acc:MGI:88464]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa23570	Nonsense	Available for shipment	Available now
sa23569	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa23570

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000086290	Nonsense	48	686	1	2
ENSDART00000136811	Nonsense	48	686	2	3

Genomic Location (Zv9):

Chromosome 19 (position 37053557)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	35918077
GRCz11	19	35505197

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ATGATGAAGGGGCCTGTTGGGCCTCCCTTCAGAGAAGGCAAGGGCCAGTA[T/A]CTCGGTGAGTGTTCAATTTAACATCCATATTTATATCTATGTAGTTTTGC

Long Flanking Sequence:

GCCACTTTTCCAAATGATCAGCTAGAAGTCAAGTTATTGTTTGTTGCTCCTACACCTGGCATTGATTACAAGACTTTTGTCGATAGTGCACAGTAAGAAACATTCATGTATCATTATGCTGGATTACAGACAAAGTTATGATTATTGTGAAACCAAAAGCAAAATAATCCAGAATTCCTTTACTGAGGTTTAGAAATAACTCAGGGTTAACTATTTCTATTGTGAAAAGCCTTATCATGACTTTAATGAATACAAACAAAAAGGTAAAAGGCTGCAGTAAAAAAGAAAACTAACAATGAATTGATGATCTTTCTCTCTTTGCAGTTTGTAATCTTGTGACCCCAGAGGCCATTGACAATGCTGACGGTGCTCTGTGTCCTGCTAACCCTGGGGAATCATGCCCTTGGTGGAGGTTACGCTCCTATGCCTCAGATGAAGTACGTGCAGCCCATGATGAAGGGGCCTGTTGGGCCTCCCTTCAGAGAAGGCAAGGGCCAGTA[T/A]CTCGGTGAGTGTTCAATTTAACATCCATATTTATATCTATGTAGTTTTGCCATCAAACAATCCATTGAGTCATTTAAATATGCTTGCTTCATAAAAATTTTTCAACAAAAGCTGTCAGGATCAAAATTGTTCCAAGACTCAGGAAGACTCATTTTCAAAGAAATTATGTTCTTGCAGCAAGGGAACAATACAGAAGAAACACAAGAGGTTACATTGTGGTCCATCGAGCCCAGTTTTTATACAGACAAACAAACAGATGATAAAGCATTGTCTTTAATCATTGCTCTAGTCTAAACAGTTTGTTGGGTAGAATCCTGTTCATCACATACTCAACTCTTTGTCAGCACAATATTCCAGCAACTTGCACATTCCAACCGTTCAACTGATTGAAAACCACAGTTAAAAATCACTGTTTTTCCAATACTCTGAATTCAGACATACTGCTTGGCTTGCATACTGTTTGGTCACACTTTATTTTGATGGTCCATTTGTTGAATTTA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa23569

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000086290	Nonsense	345	686	2	2
ENSDART00000136811	Nonsense	345	686	3	3

Genomic Location (Zv9):

Chromosome 19 (position 37046248)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	19	35910768
GRCz11	19	35497888

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GTCTACCAGGAGATTTAGGGCCAACTGGACAGTCTGGGCTTCCAGGTCCA[C/T]AAGGTTTAATGGGTCTTCCAGGAAAACCTGGGATGCCAGGTCTTAAAGGA

Long Flanking Sequence:

GTGGTGTTCCAGGTGAACCAGGACTTAAAGGGGAAAATGGCAATGGACACACAGGTCTAACAGGTCCCAGGGGACCCACTGGCCTTCAAGGACCTCCAGGAGCTCCTGGTGTCCCTGGATTGGGTAAACCAGGGATTAATGGCCTGCCTGGGCCATTGGGGCCAAAGGGTGATAAAGGAGCACCAGGAGATCAAGGACCCTCTGGACAAGTTGGTCCTCCGGGACAACAAGGGCCACCAGGAGCACCTGGTTTGGGAAAACCTGGACTTGATGGTATTCCAGGAAACTTGGGCCCAATAGGCCCAAAGGGGGAAGCTGGCCCCAGAGGAACTCCTGGATTTCCAGGACCCCCTGGCTATGGAAAACCAGGACTTGTAGGGCAGAAAGGAGACAGAGGTCCTACTGGATTACAAGGAGTCCCTGGGGATAAAGGAGAACCTGGACTGGAAGGTCTACCAGGAGATTTAGGGCCAACTGGACAGTCTGGGCTTCCAGGTCCA[C/T]AAGGTTTAATGGGTCTTCCAGGAAAACCTGGGATGCCAGGTCTTAAAGGAGAGAATGGACCACAAGGACCTTCAGGTTTGCCAGGACTTAGAGGAGATCAGGGCCCGAGTGGGCTGGCAGGAAAGCCTGGCCTCCCAGGAGATAAAGGTCTACCTGGTCTTAACGGAGCCACTGGCAAACCTGGACCTAAAGGTGAACCAGGTCACATCGGTCTGCCAGGCAATCCTGGTTTAATTGGAGCACCAGGGCCAAAAGGTGAGAACGGGTTTTCAGGAACCCCTGGACCACGTGGCAATTCAGGGATTCCTGGACTCCCAGGCCCTACTGGTCATATGGGACCTCAAGGCATTCCAGGATTGAAAGGCGAACAAGGACCACCAGGGCCACAAGGAATTGGAAAGCCTGGAGACAAGGGGATGCCTGGTCCACAGGGACCTCCAGGAAAACAAGGCAATCCTGGACTCAGCGGTGTACAGGGCCCCCCGGGTCCACCTGGACCT

Associated Phenotype:

Not determined