Busch Lab

ZMP

si:dkeyp-55c8.1

Ensembl ID:
ENSDARG00000060637
ZFIN IDs:
ZDB-GENE-070911-2, ZDB-GENE-070912-654
Description:
calsyntenin-2 [Source:RefSeq peptide;Acc:NP_001153311]
Human Orthologue:
CLSTN2
Human Description:
calsyntenin 2 [Source:HGNC Symbol;Acc:17448]
Mouse Orthologue:
Clstn2
Mouse Description:
calsyntenin 2 Gene [Source:MGI Symbol;Acc:MGI:1929897]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa25875 Nonsense Mutation detected in F1 DNA Not yet available
sa19831 Nonsense Available for shipment Available now
sa45114 Nonsense Mutation detected in F1 DNA Not yet available
sa19832 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa25875
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085675 Nonsense 179 937 4 17
Genomic Location (Zv9):
Chromosome 2 (position 39098281)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 39428446
GRCz11 2 39394085
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTATGACAGCATCCTGCAGGTGGAGGCCTGGGATCAGGACTGCTCTCCA[C/T]AGTACAGCCAGATCTGCAACTATGAGATTGTCACACAGGATACACCCTTC
Long Flanking Sequence:
AAATTCACTTTAAACACTAATTTGAGACATTATTTATTTAATTTGAGCAATTTAAGTGCAGTTAAAAGAGACTGGTCAATTTTGACAAGGAACACTAAAGTAAGAGGTGGGAGATGAACATGACAGGAGGATGACAGGAGGTTTAAAGAACTATTTTTTTATCATTAACATAAATATTTACAGTCAGACTAACCACTTGGGGTCTCAACACAGTGACTGCTTTCTGTTTTCATTAATTTCCCTTGAATGTAACCTATTAACTCAGAGGTGTTCAGAGGTGTTTTAGCAGTGCGACTTGAGTCTATTAACACCTCTGTGTTCTATAATTAACATCTCTTCTGATTGGTTGGTGTTGCAGGGCGGTGGTTCATATCCAGGTGGATGATGTAAACGAGTTCTCCCCAGTGTTCAGAGAGCCGTTGTATCGCGCCACTGTAACTGAAGGGAAGATCTATGACAGCATCCTGCAGGTGGAGGCCTGGGATCAGGACTGCTCTCCA[C/T]AGTACAGCCAGATCTGCAACTATGAGATTGTCACACAGGATACACCCTTCGCCATTGATCGAAATGGTAAGTTCTAGTGTAAAAGATGTGTAAAAAGTTCAATAAATGTAATAAATCAAGATTTCAATTTGTCAGAAGAGCAAAACGTTTGAAAACAGTACACTAATTGAAGCATTTAACTACAATTTTAAAGAGACAGATGGTGTAAATCTCACTAAATTTATTAATTGAGTTTTTATTAGTTAATCTGATGTAGTCAAAGAGAAATGTACAGTTTTCTTTAAGTTTGGGATCAGTGATAATATGGTTATGTAAAAGTGTGCATTAAACTGATCAAATATGACAGTAAAGACTTTTACGCTGGGAAAAATATATTGATTAACAGTTTCCGTATTTTGTGATTCACGTTTTTTATTTATTTATGATTGTGAATTAAATTATGGGATGTTGATCTCTGAAAATTCAACTCTACAGTTAAAGAAAGTGAGTTTTGTTGATTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19831
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085675 Nonsense 245 937 5 17
Genomic Location (Zv9):
Chromosome 2 (position 39115301)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 39445466
GRCz11 2 39411105
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGAGGGCGATGGAGAGCGTTCCAGTTCACATTGACGTCAAACCAGTGTG[C/A]AAGCCAGGCTGGCAAGGTCAGTGGATACTTAATCTGTTGACTTATGCTTT
Long Flanking Sequence:
TGCCATGAATGCAGATAACCATTACAAAGCCTTGTGAAATACAAAATACAGAGATTAGATGTAATTATTTTTATTCTAATTAGCAGCATTGCAAACGGTCTGGCAGATATAATCCATAATTGCTGAAACAGGGACACTAACGCTGTTGAAATTACATTTGTGATTGAAAACATTTGGCCAGAGTCATTGTATGGGAGCTTAATTATTGTTTAAAAGCATATGTTGTTGTGGTTGTATCTCAGGCTGGCAGCTGCAACGATTACAGATTGCTCTTTTAAGTTTTGCTTTCCATTTTCCACTTAGTGTGTTTAAATTTATTTTGCAAATGTTCTCACGTTTTGTGGCCTTGTTTTATTCATCTCTGCAGGCAACATAAGAAACACAGAGCGACTGAGCTTCGACAAACAACAGCACTATAAAATCATGGTGACGGCCTACGATTGTGGCCAGAAGAGGGCGATGGAGAGCGTTCCAGTTCACATTGACGTCAAACCAGTGTG[C/A]AAGCCAGGCTGGCAAGGTCAGTGGATACTTAATCTGTTGACTTATGCTTTTCACCATTCAAATTAGCTTCATATTCTGTAGTTTTCTAAGCAGCATCTTTTGCTAATATCACACTGTAGCGTTCATCCATTGCAATTATCTTTTTTTGTTGCTTAAGGGTTTTTTTTATTTTTTTGTGTGTGTGTGTGCTCTCTTTGACATTGCTTCTTGTGATTCACACTATTGTTCTGTGATTCTATTGGGGGAAAAGCGAGAAATTTCATTTAGCAGTTGTCATGTCATGTAGCAGTTGACCGACTATCATTGAGATGAATGGAAATGCTAACAAATCGGTTTCTCCAGATACTATTGACTTTTTTCTGGGGTTTCAAGGCTGCGTCTTTTTCAAAAGAAGTCTTTTGTCTTTTTTTCACAAATGTCTCAGATACCCTTCGGCAATGGTTTTCAACATGTTGAAGGTCACTGAGGGTTTTTTGGAGGTCAACTGTTTGTATTCATAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45114
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085675 Nonsense 353 937 7 17
Genomic Location (Zv9):
Chromosome 2 (position 39138409)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 39468574
GRCz11 2 39434213
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGACAGACAGTGGCCGAGACAGTGACCTCATCTTCCGATTTGATGGACGA[C/T]AGGCAGCCAACATCCCAGATTGGGTTGTGCCACAGAACCTGACAGATCAG
Long Flanking Sequence:
GAAAGTTTATTAAAAACAAGAAATATTTTTGCGGATTTAATTAGGACATATGCTTTTCAAGCACAAACTCAAACTCTCTTTCCCCACGTGAGCACCCTAGCTTATCGAGTGTTGCTAGGCCGCGACTCTGACAGCAGTGAGTTTCATAATGAGACGTTTGCTTTCAGAAATGACATTTCAGTCAGGCTTGAATGTGGGTCCTGGAACCAAATGTTATTTGCTTTTCATCTCTAATTTGATTTGAAGTGTGCTGTATGCACAGTATATTTGAATGCCAGGGCAACTAACATGATTTTAACTCTTTATGACAGACAGCTTGTAATTTTTCATCACTGCCTCTTGAAGTAACCTGAACTAACCTCAGTGCTTTTATCTCTGCAGGAGCAGCCTCGGGCAGCACAGACCTTCTCCCGGCTCCTAGCACATCCACCAATTGGACGGCATCCCTGCTGACAGACAGTGGCCGAGACAGTGACCTCATCTTCCGATTTGATGGACGA[C/T]AGGCAGCCAACATCCCAGATTGGGTTGTGCCACAGAACCTGACAGATCAGTTCACCATAGCAACATGGATGAAGCATGGGCCGAGTCCTGGACTGAGAGCTGAGAAGGAGACGTTGCTCTGTAATTCAGATAAAACTGGTGAGTTATGAAGACTGAATAGGACTTTAAGAGGGCCATGGCCTTTGATTAAGTGGTGGATAAGTGCACATTCTTCTTTTCTCGTTAGGTTTAGGTCTTTTTTAAGTTTTGAAAAGAGTTTTTTTTTTCACTGTAACAAAGTATTACATTTAAAAACAGTCTTAAAAGTCCAAATATACTCATTAAGGGATGATGCTTGAAGATATTTTTTGATAAAAAAAACAGTGGCCATATACAGTATTACCATGTAGGCGCGTAACTGAGGCCAGCCAGCGAAATGCTGTACAGGTAAACCTCACTCCGCTCAACCCAAAATGGTGCTGTAGCGACAGACACTAGAGGCCATGGTCTTTAGCCTCTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19832
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085675 Essential Splice Site 399 937 8 17
Genomic Location (Zv9):
Chromosome 2 (position 39147346)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 39477511
GRCz11 2 39443150
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTAGTATTTGACGCATGTACAATAATGCTTCTCTGTGTTTTCTTTTCGC[A/T]GAGATGAACAGACATCATTATTCTCTGTATGTCCACAACTGCCGTCTGGT
Long Flanking Sequence:
TATTCAAAGTAAAATCTAATTTATTAAACAGTTTCACATGATCTGTCAGAAATCATTCTCTTACCAAATTCACAAGAACATTTTGATTAACAATAGAATGTTCTTTTTCTGACTATTTAAAAGTGTTAACTGTGGATTTTGGCCAGTTTAATAGGTTCCTGCTGAAATAAAAGCCTTAGTCACTATAAAATTACAGCTTTCAAACTTCACATTTTAAGAAATGCCTAGATTTTGCCTAAATTAGTCAGTCCATTCCAAGCTTAAAAATGACTTCATTTGGTTTTTCTGCAGAGCAGTACTTGTTAAATTCCTTCTGTGTCCATACGTTCCTTCTATAATCTATAAATGGAAATCTTAAATCAACATCTACCTCTTACTTTGCCAACCATTCAGAGTGATTTGTAGAAAATCCTTTTAGCAGTTCTAAAAATAATCTATGTCACCTATAAAATTAGTATTTGACGCATGTACAATAATGCTTCTCTGTGTTTTCTTTTCGC[A/T]GAGATGAACAGACATCATTATTCTCTGTATGTCCACAACTGCCGTCTGGTGTTTCTTCTGAGGCGCGACTTCATTCAGCTGGACTCCTTCAGACCGGCCGAATTTCACTGGAGACTGGAACAGGTGAGCCACACATTCATGTCAACTTCACATGCAGCCCTTGGATAAACAGGACGGGAAAAATGCCACACGGATCGGGCTCCATTTATAGTAATCACTTGTGAAGTGAAGTTCGCTCTGTATAATTTTCAATTACCTGTTTCTGAATTATTCATTATCCGTGTGACTGATCTTTCTGTTGCGATGAGTGATCTGTCACTGGTGAAATGATTATTATCAGAAGGACAAATTGGAAAGCCGACGCAAAAGACAGCGCTCACGTTTTCTCTCCCAGCGCTTATTTGCTTCATAATCAGCCTAGTTTTTGTTTGGAAACACCTTGATTTTCTCATATTTTCAGCATTTCCCTTGGCTAACGGAGAGTGCGGACTAATCTCTTG
Associated Phenotype:
Not determined