Busch Lab

ZMP

usp16

Ensembl ID:
ENSDARG00000060633
ZFIN ID:
ZDB-GENE-030131-4153
Description:
Ubiquitin carboxyl-terminal hydrolase 16 [Source:UniProtKB/Swiss-Prot;Acc:A8HAL1]
Human Orthologue:
USP16
Human Description:
ubiquitin specific peptidase 16 [Source:HGNC Symbol;Acc:12614]
Mouse Orthologue:
Usp16
Mouse Description:
ubiquitin specific peptidase 16 Gene [Source:MGI Symbol;Acc:MGI:1921362]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa17060 Nonsense Available for shipment Available now
sa16288 Nonsense Available for shipment Available now
sa2796 Nonsense F2 line generated Not yet available
sa42615 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa17060
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085645 Nonsense 48 815 3 17
ENSDART00000134075 Nonsense 48 113 3 4

The following transcripts of ENSDARG00000060633 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 39833620)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 41350327
GRCz11 15 41307723
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGMACAGCGTACTGAAGAAAGCCTGWCTGAATRAGCACTGGAGCTCCTG[T/A]CAAGACTGTGAGCAGGACAAGMCTGAAGAAAAGCAGATCTTAGAGGATCA
Long Flanking Sequence:
AGATTATGGTAGAGACCTTTTTCTTTTTTCCTATAATTACAGACATGTGCAGGAACCACCAAAGTTAATTACAGCAGGCTAGACCACACAGAACATCAAAGGTACACTTTCAAATTTGAGTTTATAAAAAAAAAAAAAAAAAAGCGCCTCTTTTTTTTTTAGGTGTTTATTATAACACAGACGACATATACAGTTATTTTAAACACTTTCAATAGTGTTTTATGAAAATTCATAGGGTTTTCTGTATCATATGTGTCAAAAGAAGATTATTCAGCAAAAATCATTCCATTTGCTGAAGCACAGAGAAAGTTGTGGCAACATTAAGATTCAAATCCCCATAGAGGGGATGAAAACATCCCCGACAGCACACAAGGGTTAACATCAAACCCCACTAATGATTCTCCTGCTGCTTTATCAGGGCCCTCCTGCACTCACATTCGTAAAGGAACAGAGAACAGCGTACTGAAGAAAGCCTGTCTGAATGAGCACTGGAGCTCCTG[T/A]CAAGACTGTGAGCAGGACAAGCCTGAAGAAAAGCAGATCTTAGAGGATCAGACTGACGGAGAGAGTCCAGCTGTGTGGATGTGTCTGAAATGTGGACACAGAGTAAGTGATCATTAGCTCACTATTGACCAGTGTTTTTGTGCAGTTAGTCACAAAATAACTTGTTACTGTAATGAAGGTTCTTATCCACTGAAAAATTAAAGTATGGGATTTCTTTTCATGTTTAGGGAATTACAGTTGGGGGGGGATTCAGTTCAATTGGGACGCTTTGATTAATGGCAAAATGTGTCCTGAATTTCCTCCACTGTTCAGAGAATTTCTGTATAGACAATTTCAATGTAGTAATGTTATTGGCCCTTGAACATTTCCTGCTTGTTCTTATAACATATTATAACTGTAACAAGAGGCAATTATACTTTCATGTTAAAACATCTATCATGCGTTGGGAGACTCGATTATTTATCAATATGTGGACTTTTTTGGATTCTCGAAAGCTATAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16288
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085645 Nonsense 195 815 6 17
ENSDART00000134075 None None 113 None 4

The following transcripts of ENSDARG00000060633 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 39829669)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 41346376
GRCz11 15 41303772
KASP Assay ID:
2260-8936.1 (used for ordering genotyping assays)
KASP Sequence:
AGGGGAAGCAGAAGAGCAGYTYGAAACAAGAGGACAGTYCTAAMAGCCAK[C/T]AATCAGCCGCCGCTGGAAGCTCAGYTGTGGTGTCTGTCAGGGGTCTCAGT
Long Flanking Sequence:
ACGTGTTCAATACTTATTTTACCGACTGTATCTATAAAAACTGTCAACGGCCGTATTATTGTAGTTAAATATTATTTAAATTATGCTAAAATTACCTAAAAACCTGGACTATATAGATCTGAATAAAACTGTAAAGTTTGATCTTAGTGCTGCTTGAGGGATTTCTGTCTTATTTTGAATAAAGATATGTATCATAAATGAAGTCTAGAGATGCAAAATAGATGAAGAAGGATAATAAAAAATAAATAAATGTGGATTTTGGATGTTTTCTTCCTAGTAGTCTGAAGTAGGCATGCTTTTGGAAGTAAAATGGATCTAAGTGAATGAATTCTAACAATGGTTTTGCCTCAAACATGATTTATTTTCATTATAATTCTACAGAAAGTTGGAAAGAAGACATCTCTGTGATGAATTCTGCAGAGCAAACGCAGGATGAAGAGAAAGGGAAGAAGGGGAAGCAGAAGAGCAGCTCGAAACAAGAGGACAGTCCTAAAAGCCAT[C/T]AATCAGCCGCCGCTGGAAGCTCAGCTGTGGTGTCTGTCAGGGGTCTCAGTAATCTGGGAAACACGTGTTTCTTCAATGCAGTCGTGCAGGTACAGAGTCAGAGTGGGAGACGCTACACATGACAAACACAAACTCTTTTACTGTGAGTAAACAAGCTCTTTTCTTTTGTCTCCCTCTCAGAGTTTATCACAGACACAGTATTTGAGGGAGCTGCTGAAGCAGATTGCAGAGGAGAAGAGCAGCTTCTCCATCACTCCAGCACTGTCATCTGAGCTGGTACTGAAGCTCACACTCATCATGTTCCTCATTTTACACATAAAGCTTCATCTGACTGGACGTTTTCACATCATGTTTTCAGGATCCTCTTCAGATCCAGCTGGAAAGGCCTGGATCGCTCACTCTGGCTATGTGTCAGCTAATGAATGAAATCCAAGAGACCAAGAAAGGTGTTGTGACTCCTAAAGAGCTCTTCACACAAGTGTGTAAAAAGTAAGTAGTTG
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa2828
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085645 Nonsense 268 815 8 17
ENSDART00000134075 None None 113 None 4

The following transcripts of ENSDARG00000060633 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 39829276)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 41345983
GRCz11 15 41303379
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CACATCRTGTTTTCAGGATCCTCTTCAGATCCAGCTGGAAAGGCCTGGAT[C/A]GCTCACTCTGGCTATGTGTCAGCTAATGAATGAAATCCAAGAGACCAAGA
Long Flanking Sequence:
AAGACATCTCTGTGATGAATTCTGCAGAGCAAACGCAGGATGAAGAGAAAGGGAAGAAGGGGAAGCAGAAGAGCAGCTCGAAACAAGAGGACAGTCCTAAAAGCCATCAATCAGCCGCCGCTGGAAGCTCAGCTGTGGTGTCTGTCAGGGGTCTCAGTAATCTGGGAAACACGTGTTTCTTCAATGCAGTCGTGCAGGTACAGAGTCAGAGTGGGAGACGCTACACATGACAAACACAAACTCTTTTACTGTGAGTAAACAAGCTCTTTTCTTTTGTCTCCCTCTCAGAGTTTATCACAGACACAGTATTTGAGGGAGCTGCTGAAGCAGATTGCAGAGGAGAAGAGCAGCTTCTCCATCACTCCAGCACTGTCATCTGAGCTGGTACTGAAGCTCACACTCATCATGTTCCTCATTTTACACATAAAGCTTCATCTGACTGGACGTTTTCACATCATGTTTTCAGGATCCTCTTCAGATCCAGCTGGAAAGGCCTGGAT[C/A]GCTCACTCTGGCTATGTGTCAGCTAATGAATGAAATCCAAGAGACCAAGAAAGGTGTTGTGACTCCTAAAGAGCTCTTCACACAAGTGTGTAAAAAGTAAGTAGTTGCTTAAAAATGCTCTCAGCACAGACACTTCATATAATCAGTGTATGGACGATTGATTAATTGTCCATTATAGTTTAAATCTATATGGTCTGAACAAGGTGACACGATGGGGGTAGCACAATCGCCTTACAGCAAGAAGGTCGCTGGTTTGAGCCTCAGCTGGGTCAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCTGTGTTGGCGTGGGTTTCCTCCAGGTGCTCTGGTTTCACCCACATTTTAAAAACTTATGCTATAGGTGAATTGGGTGAACTAAATTGGCAGTAGTGTATGTGTGTGTTTGAATGCAAGAGTGTATGGGTGTGTCCCTGTAGTGTGTTGCGGCTGGAAGGGCATTCGCTGCTTAAAAAAGCCAGAAAAGACTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa2796
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085645 Nonsense 452 815 12 17
ENSDART00000134075 None None 113 None 4

The following transcripts of ENSDARG00000060633 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 39825776)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 41342483
GRCz11 15 41299879
KASP Assay ID:
554-2747.1 (used for ordering genotyping assays)
KASP Sequence:
ATGGGAATGAAGACATGCCTACAGGAACAGGAAGCAAATATCAGCAGAAG[A/T]AAGCCAAAAAACAGGCCAAGAAACAAGCCAAGGTAAAACACACACACACA
Long Flanking Sequence:
TCAGAGACTTATTTTATGACCAATTATAAACATATTGAACAACATATTAACATAGTACTTGGCTATAAACATACACCAACATAAACATAAAGAAAGAGGAATTAAATTAAGAATTAAATTCAGAGAAGAAAAAAATAAAAAAATTAAGTTATTATTGATAGATAATTGGGGTAAACTTTCAATTAGGATATAGTAGCCACTGAGCATTTAATGTAAGATAGAAAAGTCTGCCAGACCTCATAAAACGTGAGCTTCATATGTGTGCTGTAACCCTCAGACACTTTGAGGAAATGTTCATAGTTGCTGGTATGTGTGCATGTGTGTGTTCTTTAGCAGTGAACTGATCTGAGTGCCTCTTTTAGGCCTACAGGAAGAAGAATCAGAAGAAAGCAGTCCAGCATCGACACAGTGTCAGTGATGATGGAGACCAAGACACAAGTTCTCTAGCCAATGGGAATGAAGACATGCCTACAGGAACAGGAAGCAAATATCAGCAGAAG[A/T]AAGCCAAAAAACAGGCCAAGAAACAAGCCAAGGTAAAACACACACACACACACACACACACACACACACATATATACGTATATATATGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTTTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATGTATGTATATGTATATGTGTATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATGTATGTATGTATATGTGTGTGTATGTATATATATATATATATATATATATATATATATATATATGTGTGTATATATATATATATATATATATATGTATATGTGTGTATTATTTATTTACATATGTATGTGTGTTCACAGAATCAGAGACGGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa42615
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085645 Essential Splice Site 726 815 16 17
ENSDART00000134075 None None 113 None 4

The following transcripts of ENSDARG00000060633 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 15 (position 39820576)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 41337283
GRCz11 15 41294679
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCATGAAATTGTGTATTGTGTACTTCTTTAAAGCTCTCTTTGTGTTTCA[G/T]GGTGTAAAAGAGGGCGAGACGCAGGTGCTGTACAGTCTCTATGGCATAGT
Long Flanking Sequence:
ACTATTTATTCAATACACTTTAAATGATTGCAAAAATAGCTAATAATCAATATAGCATTTCTTTAGGGAAATGTCATATTGCAAGGAATATTGCTATCACAATATACTAATCAACCATATTGCATATTAATTAACGTTATGCCTTCTTTTATGAATACGTTTTTGCAAATATTTTATTTATTTTTAATAAATAAAAGGGGGCAGGGTGGGGTACTATGTGTTTTAAAGATATGTAAGTGTATGTGTGCTGAGTGGTATGAAGTCATTTTGTGCATTTCATTAAGGAACACTCACCAACACAATCATCCCAATCAACATAACATAATGAATTCTTTCTAAATAGAGTCATCTTGTGAAATTAGATTCATATATTGCTACATATATTGCAAATAAGAAAAAATTGCAGTGTCAGTTTTTTTCCAATATGATGCACCTTCATAGACAAAGGAAACCATGAAATTGTGTATTGTGTACTTCTTTAAAGCTCTCTTTGTGTTTCA[G/T]GGTGTAAAAGAGGGCGAGACGCAGGTGCTGTACAGTCTCTATGGCATAGTGGAACACAGTGGCACCATGCGCTCTGGACACTACACTGCCTATGTTAAATCACGACCCTCCACACACAATTGTGTACAAAACGGGACTGCTGCTGCATGTGAGTATCAGTGCTAAAACAAAGATTTTGATGACCTTTATGAATTTACATAAGCATGTGTTATAGTCTTATTGAAGTGCCTTGAAATGCACAAGATGTTCCGTGTGTTAATTTAATTTCCTCTGAAACAGGAAGTCAGAGCAGGCATATTGAGTGGTCACTTAGAAAAATCGCAATTAGTAAAACTGTGATGATGTGTTTAACTGTCATCAGGATCCTAAAGCCAAAGATTTTTAATATTTAGTTTAAATATTTTAAAAAGATTTTCAAGAATACACATTTACAAAACCCCACAGCCCTGCCAAAAATAGAACATACAATAGTTTACTAGCTGTCAATTACTTCGGTCTGA
Associated Phenotype:
Not determined