ZMP

dpcd

Ensembl ID:

ENSDARG00000060501

ZFIN ID:

ZDB-GENE-060825-166

Description:

Protein DPCD [Source:UniProtKB/Swiss-Prot;Acc:Q0P448]

Human Orthologue:

DPCD

Human Description:

deleted in primary ciliary dyskinesia homolog (mouse) [Source:HGNC Symbol;Acc:24542]

Mouse Orthologue:

Dpcd

Mouse Description:

deleted in primary ciliary dyskinesia Gene [Source:MGI Symbol;Acc:MGI:1924407]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa13585	Essential Splice Site	Available for shipment	Available now
sa38273	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa13585

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000085309	Essential Splice Site	49	200	2	6
ENSDART00000142296	Essential Splice Site	49	139	2	5

Genomic Location (Zv9):

Chromosome 1 (position 31111035)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	30924495
GRCz11	1	31657063

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GGCAATGAGATGGCTGAGGAGTATGACCTAAAAACAGATGAGCTTGTCAG[T/A]AAGTGTTTTCWGTCTTGGCTTCATCCGAGCAAATAAAAAAANGAATTCWTT

Long Flanking Sequence:

GTTGTCTTTTATTTTACTTTAGGATATTTTTTCTTCTGTGTGTGTATTTGAGCCGGTATGCTTTTAATAGTATTATACGAGTTTTTATAAATCTTTTAATTTTGCTACCGACTAACGTTAGCAGCACACGAAAACTTGCATACGAAAACAATAGACCAGGGATTTATTATAGCTTTGCTGTATTGTGATTGTATGGTGTATAATAACTACTGTAAAAATACCACGTGTTAGCTATGGTTTGTGTAACGTTAGCGTTGTTTACGTGTTTTTGTTGTTGCTGTTTACTTTATAGTAAAACCATGGTAATTTTACCAAGAGGAATATCTCAAGCTTTGCGTATATTATTTTAAGTCTTTAACATTGTGAGATGTATGGTAAAGTGTAAGATGTGTCTTTTCATGTGTCTTTCTCTTTCTAGGGAAAAGGAAAGTTCATTATCAGTTTGAGGATGGCAATGAGATGGCTGAGGAGTATGACCTAAAAACAGATGAGCTTGTCAG[T/A]AAGTGTTTTCTGTCTTGGCTTCATCCGAGCAAATAAAAAAAGAATTCATTTGAATATTCTTCTGTCATCATTTAATCTTTTGTTAGTGCGAAAGTGGCGACATAAAACCACCTTTGGAGGACAGGGGCAGTGGACTTTGGAAGTTGGTGAAACAAACCCAACTGGGGCTACATCTGATTTAATAAAAGAGAACAGTTCAAATGTGAGCGCTCATTTTTAGTTATTTTAATACTTAATTGATGATGATTTACAAAAAATAATAACAATGTTTATTGCAAGACAACCTAATTATCTTGTTTTTATGCCCACAGCCACTATTTATGCGCCGGGACACAAAGACAAGTTTCCAGTGGAGGATCCGTAACATTTCTTACCCTTTAGAAGTCTACAGTGTGACAGCTGAGCCAATGGAAAGATGTTGTGTCATTCGGACCTCGAACAAAAAGTAAGTTAATATTAATAAGAGGTTTTAAATGATCATTTATATTTTTAATCACCAT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa38273

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000085309	Nonsense	129	200	4	6
ENSDART00000142296	Nonsense	129	139	4	5

Genomic Location (Zv9):

Chromosome 1 (position 31110599)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	30924059
GRCz11	1	31656627

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CTACAGTGTGACAGCTGAGCCAATGGAAAGATGTTGTGTCATTCGGACCT[C/A]GAACAAAAAGTAAGTTAATATTAATAAGAGGTTTTAAATGATCATTTATA

Long Flanking Sequence:

ATCAGTTTGAGGATGGCAATGAGATGGCTGAGGAGTATGACCTAAAAACAGATGAGCTTGTCAGTAAGTGTTTTCTGTCTTGGCTTCATCCGAGCAAATAAAAAAAGAATTCATTTGAATATTCTTCTGTCATCATTTAATCTTTTGTTAGTGCGAAAGTGGCGACATAAAACCACCTTTGGAGGACAGGGGCAGTGGACTTTGGAAGTTGGTGAAACAAACCCAACTGGGGCTACATCTGATTTAATAAAAGAGAACAGTTCAAATGTGAGCGCTCATTTTTAGTTATTTTAATACTTAATTGATGATGATTTACAAAAAATAATAACAATGTTTATTGCAAGACAACCTAATTATCTTGTTTTTATGCCCACAGCCACTATTTATGCGCCGGGACACAAAGACAAGTTTCCAGTGGAGGATCCGTAACATTTCTTACCCTTTAGAAGTCTACAGTGTGACAGCTGAGCCAATGGAAAGATGTTGTGTCATTCGGACCT[C/A]GAACAAAAAGTAAGTTAATATTAATAAGAGGTTTTAAATGATCATTTATATTTTTAATCACCATAGAGCATATTATTACTGAAGTCATTTCATAATTTTCATTTTACAGAAACACTTGTTCATTTCTAAATTGTCTCAACCTTTATCGTAAAAAAAAAAAAACAGTCAAAGAATCATTTAATTAATGTGAATTATGAGGTAAGTGGATTGTTACATCCCTATTTAGGATTTATTCACACTTGACACATTTGGTTCAGTTAAAGTAAATATGGCAAATTTTTTTCAATAAGTGTGCATTGTGCCATACAAACCTTGAAATGAATTAACCAGGACTGGTGAAAATATCAAATATATTTCTCAGATCACTTCTAAACAAACCAAAGAAATCCCAACACAACAAAATTAGCATATGATGTGACCATAAACAGGACAGAATGTCACAAGTATTTAACAGATAAAAGCAAAGATTGGAATGTTGGACACTTCATCCACTCAGTGGT

Associated Phenotype:

Not determined