Busch Lab

ZMP

ubr1

Ensembl ID:
ENSDARG00000060480
ZFIN ID:
ZDB-GENE-091110-2
Description:
LOC568531 protein [Source:UniProtKB/TrEMBL;Acc:A2RV49]
Human Orthologue:
UBR1
Human Description:
ubiquitin protein ligase E3 component n-recognin 1 [Source:HGNC Symbol;Acc:16808]
Mouse Orthologue:
Ubr1
Mouse Description:
ubiquitin protein ligase E3 component n-recognin 1 Gene [Source:MGI Symbol;Acc:MGI:1277977]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa23151 Nonsense Available for shipment Available now
sa23152 Nonsense Mutation detected in F1 DNA Not yet available
sa23153 Nonsense Available for shipment Available now
sa23154 Essential Splice Site Available for shipment Available now

Mutation Details

This allele has been removed from public view.

Allele Name:
sa28908
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085223 Essential Splice Site 253 870 6 25
Genomic Location (Zv9):
Chromosome 17 (position 39982207)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 39867104
GRCz11 17 39814689
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTGTGACCAGAATCAGGCTCAAGTTTATACTGCACTTATTGACAAGGAA[G/A]TAAGTATCCCGACCATCTGCTTTCTACACTACCTGACAAAAGTCTTGCCA
Long Flanking Sequence:
GAGCGCAAATGCATTTGCTATTTAAACAACATGGTGCAAAACAGCAAAACGACACTTGCGTCAAGCTGAAACTAGCAAATAACATTTGCGCCGTGTCTTGCGCCGCATTGCACGGGGTGTATGATAGGGCCTAAAGTCAGCTTTATCGTCAATTCTGCCACATGTATAGAAATACAGAGAATTGAAATTGTTACTCTCAGACCCTGGGTGCAAACAAATAACAAAATCACTACAAGAGGAATGTAAATGTACATTAATATACACAAATTCAAAATTACATCATAACAGAAGACAGTTTTGTGAGGTGCTGTCTCGAAATGACTTTGAAAAAGGTTAAAGATTAATGTTGTTTTGTGTTCAGAGTGAAGGAAGACAGCTACTTCTGTATCCTCTACAACGATGAGCATCACTCATATGACCACGTCATCTACACACTTCAGCGAGCCATCGCCTGTGACCAGAATCAGGCTCAAGTTTATACTGCACTTATTGACAAGGAA[G/A]TAAGTATCCCGACCATCTGCTTTCTACACTACCTGACAAAAGTCTTGCCATTGATCGCAGTTGTAAGAGCAACAAATAATAACTTGACTTCTAGTTGATCATTTGGAAAAGTGGCAGAAGGTAGATTTTTCTGATGAATCATCTGTTGAACTGCATCTCAATCATCACAACTACTGCAGAAGACCCATTGGAACCTGCATGAACCCAAGATTCTCACAAAAATCAGCCAAGTTTGGTGAAGGAAAAATCATGGTTTGGGGTTACATTAAGTGTGTGGGGCGTAGGAGAGATCTGCAGAGTAGATGGCAACATCAACAGCCTGAGGTATCAAGACATTTGTGCTGCCTATTACATTACAAACCACAGGAGAGGGAAAATTTTTCCGCAGGATAGCGCTCCTTCTCATACTTCAGCCACCACATCAAAGTTCCTGAAAGCAAAGAATGTCAAGGTACTACAGGATTAGGCAGCCCAGTCACCAGACATAAACATTATGAAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23151
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085223 Nonsense 266 870 7 25
Genomic Location (Zv9):
Chromosome 17 (position 39983291)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 39868188
GRCz11 17 39815773
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCTTATGGCAGGGGCGAAGAGCAGTGAAAAGAGGGACTCTCAGAACCTG[T/A]CAACAAGCCAAGGACAATATCAGGGTAATCATAACTCACTTACATTTTAA
Long Flanking Sequence:
TTCAAATGACTTTATTTATAAATTAATTGAGTCATTGCAGAGATGTATGGATGCAGTCCTCAAGCTCATGGGAATTATGCGCAATATTAATTATTTTTCCACTGCACCATAATGACTTTATATTCTATACTGTACATTATTATTTGTTAAGTGACATGACTTTTGTCTCAGCAAAGTCAGACCTTACTGTCTTAATTCAATCATTCAAAATCAAGGCATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTAAATAAGCGTTGAGGCCTTTGTATTTCATATAAGACACTTCTACTAAATGATCAACTAGAAGTCAAGCTAATATTTGTTGTTTCTAAAACTTTTATAGGTGACAAGGCTTTAGTCAGGTAACGTATGTGTCGCATGGTTAACCAAGAGACTTTTTTATATTAGTGCTGTGATTCTTATGGCAGGGGCGAAGAGCAGTGAAAAGAGGGACTCTCAGAACCTG[T/A]CAACAAGCCAAGGACAATATCAGGGTAATCATAACTCACTTACATTTTAACATTAAATGCTAACATTTTGTATATGTTTCATGTGAATGTAATGTACTGATCATTTACAGCGTAACTCAGAGCACATTATCCAGAAACCCCTGCGTGTGGAGGTTCTTCACACTGCGGTTATGGCTCATCAGACTTTCGCTCTCAGACTCGGTGCATGGTTTCAGAAGATCATTGGCTATTCAGGTAGACTATTGGAAGCACTGACGGCACTTAACATTTTTTTCATAATTTTCAGGATATTTAAGATATGACCAAAAAGTATGATTAAAAATGAGCCCCGCTGATTCTTACAGTGCAAATGATAGTGATTCACTCATTATTAAATCGTTCATAAATGGGTCTTATTGTAAGTTGTTAGAATTGTATTCTAAATATAGGTCACAAAAATGTGATCTGTTTTTTTCAATTAGTAATACAAATGTTTATAATAGTTGCTGATGTTTGCCTCG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23152
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085223 Nonsense 482 870 13 25
Genomic Location (Zv9):
Chromosome 17 (position 39990883)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 39875680
GRCz11 17 39823265
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCCAGGTACATTCTAATCAGCAAGCCGTCTATTTGGACCGAGGCATTA[C/T]GAGTGAAGTTCCTCGAAGGTTTTCGCGTCTTTCTTCACTTTCTCGGCTGT
Long Flanking Sequence:
ACTATGCTTTTGTCTGTTGTAATTATGCGCACTCTAGTGGCGAATATTACATTCTGTGCTTTAAATACCAGGCAGAATTGCTGATGCTAATGGCTCATTAGTTCTTATCAGATCACTGAAAGTGTATGGTAAAACTATGTGGGAACAGGTCCATATATTCTGACAGAAACATCATTTAGCATTTCATTTGATTACATTTTTTCTTCCAGGCGAGGCAGTTGATTGAGGAGGGCACAGTCATCAAGGTCATTATAGACACTGTAATGGACATGATGAGGGAACATCTGGACAACAACCACCGCTTCCACTTCCAGGGCCACAACCCTGACAAGTTCTTCCGGGTTCAAGTTATCTTCCATGATCTCAGGTCTATATAAATACTGTTTAAATTCTGGACAGTGGTTCATTTTTGACATTTGACTCGATGCAGATTTGTGTCATCCTGCATTTTTTCCAGGTACATTCTAATCAGCAAGCCGTCTATTTGGACCGAGGCATTA[C/T]GAGTGAAGTTCCTCGAAGGTTTTCGCGTCTTTCTTCACTTTCTCGGCTGTATGCAGGTAATGCTTTCTCCCATCAAAAGCCTTTTAATTCACTTGGATCTGTAGCTCAATGTCTCTTGGTTGTTTTTCAGGGGATGGAAGAGGTGAAGAGGCAGTTTGGTCAGCATGTGGAGGTGGAGCCCGAGTGGGAGGCTGGATTTACACTCCAGATGCAGCTACGCCACATTCTCGCTATGTTTCAGGACTGGTGCTCTTCTGACGTAAGTCACAGCTAATCGAAGATCTAGCTTTCTGCAGTGCTTTTTCAGGGAGACACACAAGCATGACAGATTGGTGATAAGGCAATATTAATGAAAGAATATGATTATATAATATAACATACAGTGAGAGGTATTAAAAGTAAATCAAATAAATCATTCATTCATTAATATTCTTTTCGGCTTAGTCCCTTTATTAATCTGGAGTTGCCACAGCAGAATGAACCGCCAACTGATGAAAAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23153
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085223 Nonsense 807 870 23 25
Genomic Location (Zv9):
Chromosome 17 (position 40005011)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 39889808
GRCz11 17 39837854
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTTTTTGTTGTTGTTTTAGGAAACCAGGAGTGTCAGGTCATGGCTTGTA[T/G]AATGTGAAGAAGGAATGTCTGAAAGAGTTTAACCCCTTTTTCTATCATTA
Long Flanking Sequence:
ATGAGGTGCCATGAACGTTTAGTGGCCAGGTAGAGAGAATGTAAGAGCTTTTATACCAAATTTAACTCACCTGCTATCTGTGGATACCCGAGACAGTGTAACACTAATAAGTTACATGACACAGGCGAAGAAAAATCAGTAATTGTGCTCAATTTTTACATTTTCACTTTGGGGTGTACTTACTTTTGTTGCCAGGGGTTCAGCTATTATTGGCTGCATTTGTAGTTATTTTGAGAGGACAATAAATTTACACTGCTATACACACTTTACACTGACTACTTTTCATTGTGTCAAAGTGTCATTTCTGTAGTGTTGTCCTATGAAAATATTTGCGGAAATGGGAAGGGTGTGCTCACTTTTGTGACATACTAATATATATATATATATATATATATATATATATATATATATATACACACACATTATAAAATACTAAGCAAACATGTTGACATTTTTTGTTGTTGTTTTAGGAAACCAGGAGTGTCAGGTCATGGCTTGTA[T/G]AATGTGAAGAAGGAATGTCTGAAAGAGTTTAACCCCTTTTTCTATCATTACTCCAGACCACAGCATAGTAAGGTACACAATGCGCCTGTTATCTCATGAACTATATTAGCTTATTAGTGTTGAAATGACTATAAATATTTTCATTTTAGGCAGAAGAAGCTCAGAAGGAGAGAAGGTCTCAAGAGAGCAGTGAAAAAGGTATGTCATGCAAATTAACAACAATTTATATTCACTGATAGATGTGTGTAACATGATTATTGATCTCTCTCATTATCCATTCTCAGGTACAGCGATTGGTGATCAGCCAAACAACAAATCAGCCAAACAAAACAGTCAAACAAAACAGTCAAACAAAACAAATCAGCCAAACAAAACAAAACAAAAAAATTAAATCAGACAAACAAAACAAATCAAACAAACAAACAAACAAACAAAAAACAACCAATCAAAACAAAAAACAGCCAAACAAAACATAAAACAAAACAGCCCAACAAACATAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23154
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085223 Essential Splice Site 831 870 23 25
Genomic Location (Zv9):
Chromosome 17 (position 40005085)
Other Location(s):
Assembly Chromosome Position
GRCz10 17 39889882
GRCz11 17 39837928
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAGTTTAACCCCTTTTTCTATCATTACTCCAGACCACAGCATAGTAAGG[T/C]ACACAATGCGCCTGTTATCTCATGAACTATATTAGCTTATTAGTGTTGAA
Long Flanking Sequence:
TATCTGTGGATACCCGAGACAGTGTAACACTAATAAGTTACATGACACAGGCGAAGAAAAATCAGTAATTGTGCTCAATTTTTACATTTTCACTTTGGGGTGTACTTACTTTTGTTGCCAGGGGTTCAGCTATTATTGGCTGCATTTGTAGTTATTTTGAGAGGACAATAAATTTACACTGCTATACACACTTTACACTGACTACTTTTCATTGTGTCAAAGTGTCATTTCTGTAGTGTTGTCCTATGAAAATATTTGCGGAAATGGGAAGGGTGTGCTCACTTTTGTGACATACTAATATATATATATATATATATATATATATATATATATATATATACACACACATTATAAAATACTAAGCAAACATGTTGACATTTTTTGTTGTTGTTTTAGGAAACCAGGAGTGTCAGGTCATGGCTTGTATAATGTGAAGAAGGAATGTCTGAAAGAGTTTAACCCCTTTTTCTATCATTACTCCAGACCACAGCATAGTAAGG[T/C]ACACAATGCGCCTGTTATCTCATGAACTATATTAGCTTATTAGTGTTGAAATGACTATAAATATTTTCATTTTAGGCAGAAGAAGCTCAGAAGGAGAGAAGGTCTCAAGAGAGCAGTGAAAAAGGTATGTCATGCAAATTAACAACAATTTATATTCACTGATAGATGTGTGTAACATGATTATTGATCTCTCTCATTATCCATTCTCAGGTACAGCGATTGGTGATCAGCCAAACAACAAATCAGCCAAACAAAACAGTCAAACAAAACAGTCAAACAAAACAAATCAGCCAAACAAAACAAAACAAAAAAATTAAATCAGACAAACAAAACAAATCAAACAAACAAACAAACAAACAAAAAACAACCAATCAAAACAAAAAACAGCCAAACAAAACATAAAACAAAACAGCCCAACAAACATAAGAGCCAAATAAAACAAAACAGCAAACAAAACAAAACAGCCTAACAAAACTAAACAAAACAGCCTAACAAAAATA
Associated Phenotype:
Not determined