ZMP
ubr1
Ensembl ID:
ZFIN ID:
Description:
LOC568531 protein [Source:UniProtKB/TrEMBL;Acc:A2RV49]
Human Orthologue:
UBR1
Human Description:
ubiquitin protein ligase E3 component n-recognin 1 [Source:HGNC Symbol;Acc:16808]
Mouse Orthologue:
Ubr1
Mouse Description:
ubiquitin protein ligase E3 component n-recognin 1 Gene [Source:MGI Symbol;Acc:MGI:1277977]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa23151 | Nonsense | Available for shipment | Available now |
sa23152 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa23153 | Nonsense | Available for shipment | Available now |
sa23154 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa23151
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085223 | Nonsense | 266 | 870 | 7 | 25 |
Genomic Location (Zv9):
Chromosome 17 (position 39983291)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 39868188 |
GRCz11 | 17 | 39815773 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCTTATGGCAGGGGCGAAGAGCAGTGAAAAGAGGGACTCTCAGAACCTG[T/A]CAACAAGCCAAGGACAATATCAGGGTAATCATAACTCACTTACATTTTAA
Long Flanking Sequence:
TTCAAATGACTTTATTTATAAATTAATTGAGTCATTGCAGAGATGTATGGATGCAGTCCTCAAGCTCATGGGAATTATGCGCAATATTAATTATTTTTCCACTGCACCATAATGACTTTATATTCTATACTGTACATTATTATTTGTTAAGTGACATGACTTTTGTCTCAGCAAAGTCAGACCTTACTGTCTTAATTCAATCATTCAAAATCAAGGCATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTAAATAAGCGTTGAGGCCTTTGTATTTCATATAAGACACTTCTACTAAATGATCAACTAGAAGTCAAGCTAATATTTGTTGTTTCTAAAACTTTTATAGGTGACAAGGCTTTAGTCAGGTAACGTATGTGTCGCATGGTTAACCAAGAGACTTTTTTATATTAGTGCTGTGATTCTTATGGCAGGGGCGAAGAGCAGTGAAAAGAGGGACTCTCAGAACCTG[T/A]CAACAAGCCAAGGACAATATCAGGGTAATCATAACTCACTTACATTTTAACATTAAATGCTAACATTTTGTATATGTTTCATGTGAATGTAATGTACTGATCATTTACAGCGTAACTCAGAGCACATTATCCAGAAACCCCTGCGTGTGGAGGTTCTTCACACTGCGGTTATGGCTCATCAGACTTTCGCTCTCAGACTCGGTGCATGGTTTCAGAAGATCATTGGCTATTCAGGTAGACTATTGGAAGCACTGACGGCACTTAACATTTTTTTCATAATTTTCAGGATATTTAAGATATGACCAAAAAGTATGATTAAAAATGAGCCCCGCTGATTCTTACAGTGCAAATGATAGTGATTCACTCATTATTAAATCGTTCATAAATGGGTCTTATTGTAAGTTGTTAGAATTGTATTCTAAATATAGGTCACAAAAATGTGATCTGTTTTTTTCAATTAGTAATACAAATGTTTATAATAGTTGCTGATGTTTGCCTCG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23152
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085223 | Nonsense | 482 | 870 | 13 | 25 |
Genomic Location (Zv9):
Chromosome 17 (position 39990883)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 39875680 |
GRCz11 | 17 | 39823265 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCCAGGTACATTCTAATCAGCAAGCCGTCTATTTGGACCGAGGCATTA[C/T]GAGTGAAGTTCCTCGAAGGTTTTCGCGTCTTTCTTCACTTTCTCGGCTGT
Long Flanking Sequence:
ACTATGCTTTTGTCTGTTGTAATTATGCGCACTCTAGTGGCGAATATTACATTCTGTGCTTTAAATACCAGGCAGAATTGCTGATGCTAATGGCTCATTAGTTCTTATCAGATCACTGAAAGTGTATGGTAAAACTATGTGGGAACAGGTCCATATATTCTGACAGAAACATCATTTAGCATTTCATTTGATTACATTTTTTCTTCCAGGCGAGGCAGTTGATTGAGGAGGGCACAGTCATCAAGGTCATTATAGACACTGTAATGGACATGATGAGGGAACATCTGGACAACAACCACCGCTTCCACTTCCAGGGCCACAACCCTGACAAGTTCTTCCGGGTTCAAGTTATCTTCCATGATCTCAGGTCTATATAAATACTGTTTAAATTCTGGACAGTGGTTCATTTTTGACATTTGACTCGATGCAGATTTGTGTCATCCTGCATTTTTTCCAGGTACATTCTAATCAGCAAGCCGTCTATTTGGACCGAGGCATTA[C/T]GAGTGAAGTTCCTCGAAGGTTTTCGCGTCTTTCTTCACTTTCTCGGCTGTATGCAGGTAATGCTTTCTCCCATCAAAAGCCTTTTAATTCACTTGGATCTGTAGCTCAATGTCTCTTGGTTGTTTTTCAGGGGATGGAAGAGGTGAAGAGGCAGTTTGGTCAGCATGTGGAGGTGGAGCCCGAGTGGGAGGCTGGATTTACACTCCAGATGCAGCTACGCCACATTCTCGCTATGTTTCAGGACTGGTGCTCTTCTGACGTAAGTCACAGCTAATCGAAGATCTAGCTTTCTGCAGTGCTTTTTCAGGGAGACACACAAGCATGACAGATTGGTGATAAGGCAATATTAATGAAAGAATATGATTATATAATATAACATACAGTGAGAGGTATTAAAAGTAAATCAAATAAATCATTCATTCATTAATATTCTTTTCGGCTTAGTCCCTTTATTAATCTGGAGTTGCCACAGCAGAATGAACCGCCAACTGATGAAAAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23153
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085223 | Nonsense | 807 | 870 | 23 | 25 |
Genomic Location (Zv9):
Chromosome 17 (position 40005011)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 39889808 |
GRCz11 | 17 | 39837854 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTTTTTGTTGTTGTTTTAGGAAACCAGGAGTGTCAGGTCATGGCTTGTA[T/G]AATGTGAAGAAGGAATGTCTGAAAGAGTTTAACCCCTTTTTCTATCATTA
Long Flanking Sequence:
ATGAGGTGCCATGAACGTTTAGTGGCCAGGTAGAGAGAATGTAAGAGCTTTTATACCAAATTTAACTCACCTGCTATCTGTGGATACCCGAGACAGTGTAACACTAATAAGTTACATGACACAGGCGAAGAAAAATCAGTAATTGTGCTCAATTTTTACATTTTCACTTTGGGGTGTACTTACTTTTGTTGCCAGGGGTTCAGCTATTATTGGCTGCATTTGTAGTTATTTTGAGAGGACAATAAATTTACACTGCTATACACACTTTACACTGACTACTTTTCATTGTGTCAAAGTGTCATTTCTGTAGTGTTGTCCTATGAAAATATTTGCGGAAATGGGAAGGGTGTGCTCACTTTTGTGACATACTAATATATATATATATATATATATATATATATATATATATATATACACACACATTATAAAATACTAAGCAAACATGTTGACATTTTTTGTTGTTGTTTTAGGAAACCAGGAGTGTCAGGTCATGGCTTGTA[T/G]AATGTGAAGAAGGAATGTCTGAAAGAGTTTAACCCCTTTTTCTATCATTACTCCAGACCACAGCATAGTAAGGTACACAATGCGCCTGTTATCTCATGAACTATATTAGCTTATTAGTGTTGAAATGACTATAAATATTTTCATTTTAGGCAGAAGAAGCTCAGAAGGAGAGAAGGTCTCAAGAGAGCAGTGAAAAAGGTATGTCATGCAAATTAACAACAATTTATATTCACTGATAGATGTGTGTAACATGATTATTGATCTCTCTCATTATCCATTCTCAGGTACAGCGATTGGTGATCAGCCAAACAACAAATCAGCCAAACAAAACAGTCAAACAAAACAGTCAAACAAAACAAATCAGCCAAACAAAACAAAACAAAAAAATTAAATCAGACAAACAAAACAAATCAAACAAACAAACAAACAAACAAAAAACAACCAATCAAAACAAAAAACAGCCAAACAAAACATAAAACAAAACAGCCCAACAAACATAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23154
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000085223 | Essential Splice Site | 831 | 870 | 23 | 25 |
Genomic Location (Zv9):
Chromosome 17 (position 40005085)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 17 | 39889882 |
GRCz11 | 17 | 39837928 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAGTTTAACCCCTTTTTCTATCATTACTCCAGACCACAGCATAGTAAGG[T/C]ACACAATGCGCCTGTTATCTCATGAACTATATTAGCTTATTAGTGTTGAA
Long Flanking Sequence:
TATCTGTGGATACCCGAGACAGTGTAACACTAATAAGTTACATGACACAGGCGAAGAAAAATCAGTAATTGTGCTCAATTTTTACATTTTCACTTTGGGGTGTACTTACTTTTGTTGCCAGGGGTTCAGCTATTATTGGCTGCATTTGTAGTTATTTTGAGAGGACAATAAATTTACACTGCTATACACACTTTACACTGACTACTTTTCATTGTGTCAAAGTGTCATTTCTGTAGTGTTGTCCTATGAAAATATTTGCGGAAATGGGAAGGGTGTGCTCACTTTTGTGACATACTAATATATATATATATATATATATATATATATATATATATATATACACACACATTATAAAATACTAAGCAAACATGTTGACATTTTTTGTTGTTGTTTTAGGAAACCAGGAGTGTCAGGTCATGGCTTGTATAATGTGAAGAAGGAATGTCTGAAAGAGTTTAACCCCTTTTTCTATCATTACTCCAGACCACAGCATAGTAAGG[T/C]ACACAATGCGCCTGTTATCTCATGAACTATATTAGCTTATTAGTGTTGAAATGACTATAAATATTTTCATTTTAGGCAGAAGAAGCTCAGAAGGAGAGAAGGTCTCAAGAGAGCAGTGAAAAAGGTATGTCATGCAAATTAACAACAATTTATATTCACTGATAGATGTGTGTAACATGATTATTGATCTCTCTCATTATCCATTCTCAGGTACAGCGATTGGTGATCAGCCAAACAACAAATCAGCCAAACAAAACAGTCAAACAAAACAGTCAAACAAAACAAATCAGCCAAACAAAACAAAACAAAAAAATTAAATCAGACAAACAAAACAAATCAAACAAACAAACAAACAAACAAAAAACAACCAATCAAAACAAAAAACAGCCAAACAAAACATAAAACAAAACAGCCCAACAAACATAAGAGCCAAATAAAACAAAACAGCAAACAAAACAAAACAGCCTAACAAAACTAAACAAAACAGCCTAACAAAAATA
Associated Phenotype:
Not determined