ZMP
vps8
Ensembl ID:
ZFIN ID:
Description:
vacuolar protein sorting-associated protein 8 homolog [Source:RefSeq peptide;Acc:NP_001074085]
Human Orthologue:
VPS8
Human Description:
vacuolar protein sorting 8 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29122]
Mouse Orthologue:
Vps8
Mouse Description:
vacuolar protein sorting 8 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:2146407]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa19514 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
This allele has been removed from public view.
Allele Name:
sa25599
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041419 | Essential Splice Site | 24 | 456 | 1 | 15 |
| ENSDART00000101779 | Essential Splice Site | 24 | 455 | 1 | 15 |
| ENSDART00000131092 | None | None | 1263 | None | 43 |
| ENSDART00000134311 | None | None | 146 | None | 6 |
| ENSDART00000143639 | Essential Splice Site | 24 | 1412 | 1 | 45 |
| ENSDART00000146783 | None | None | 235 | None | 9 |
Genomic Location (Zv9):
Chromosome 1 (position 29071206)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 29279821 |
| GRCz11 | 1 | 30083752 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGTCTTGTTTCTGCGTCGTCACAGCTCAATTTAATGGAAATAGAGGCGG[T/A]ACGTCTGAGATTGACTAACGTTAACGTTAAGATGATTCAGTGTCTATGAT
Long Flanking Sequence:
GCCCTCCAAGCTTCTGAAAGATAAATTGAGGTATAAAGAACCACATTGAGTTTCCATATTTCAGACAATTTCTTAACCAATTAAGTTTAAATGTATTGTTAATATCAAAAAAATCTATCATCTCTAAGCCACCTTCTACTCTTTTACCTGATATAACGTCCTTTTTTAATTTATGTGGTTTATTTTTCCATATAAAATCTAAGAAGGATTTGTTAATATTTTTGGAAATGTCATCACTAACATGCATAGAAAGAGCAGGAGACACGACTTTTTATAAACAGGAAGTTGAATGATTACGTATGCCGTGAAGTCCCGCCTTTTCCGACAACAACTAGGATGTAGTCTGTTGCTGTAGTGCATTTTGACTACAGCTGATAAAGGTATAACTTGATGATATTTTATCCGAGAGCTGATCTTTGACAGTACAATGGCTGAGTCTCCAGACTGTCGGAGTCTTGTTTCTGCGTCGTCACAGCTCAATTTAATGGAAATAGAGGCGG[T/A]ACGTCTGAGATTGACTAACGTTAACGTTAAGATGATTCAGTGTCTATGATTGTGTTAATTTTTGTTATAATTGGTTTGCTTATTTACAGGTTATTAGATAGGTGCGCTTCATTTATGCTTCTTTCTTTTACGTTTGTCACTAAGGTCGTGATTGTTTTGTGCATAACCGTTATATGTTTTTGTAATGTATTATTGTTATTATATTGTATGTATGGTAAGAATCCTCTGCACTTCTTTATAGCTCTGTACTTTGATACATGTGCGTTTTAATATTAAACATGCATTTACATTGTAGATTGACGATAAAGAGTTTGACATCCCTCAAGTGGACACACCTCCGACCCTAGAAAGCATCCTTAATGAGGTCAGTATCAGACTGTCTGTTTTTTTTTTTTTTATTGTTCCCTATCAGCACCCTCAAGATATTAGATGTGCAAATTCACCAGTCGAAGGTTAGAACGCACCTTTATGCTCTTTTCAACGTTTCATAATGTAGAGAC
Associated Phenotype:
Not determined
Mutation Details
This allele has been removed from public view.
Allele Name:
sa25600
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041419 | Nonsense | 200 | 456 | 8 | 15 |
| ENSDART00000101779 | Nonsense | 200 | 455 | 8 | 15 |
| ENSDART00000131092 | Nonsense | 176 | 1263 | 7 | 43 |
| ENSDART00000134311 | None | None | 146 | None | 6 |
| ENSDART00000143639 | Nonsense | 200 | 1412 | 8 | 45 |
| ENSDART00000146783 | None | None | 235 | None | 9 |
Genomic Location (Zv9):
Chromosome 1 (position 29076854)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 29285469 |
| GRCz11 | 1 | 30089400 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTTATGGGAAGTCTCTGTTTGTTCTTAATACAGATCACCATGTGGGATT[T/A]GGCCAATGGGAAGCTGCTGCGCACCATTACTGATGCCCATCCACCTGGCA
Long Flanking Sequence:
TGAAATGACCTCAGAGCATGCTTAACCAATTAAAATACACTAGAATGACATGAACTGAGAAGTTTGTGATGGCTGTTTGCACGCTTTTTGTTTGTGTTTTGCTTGCGGTTGCATTTGGATCTATTATTAAAAAACAAAATCACGAAGCACTGTTTGTGTTACTTGTTGAATTATATGCCTGATAAAACATAATTCTTCTGTAGCCTCTAGTTTTTGCCTAATCTTTATCTTTTGAATTTAGATCAGAACCAGGCTCTGCGTCTGTGTCTGGGCACTACAGCGACAGGAGCAGAATATGGTGCTGTGTCGGCTCTCAGCATTAATCACGACTGCACACGACTGCTGTGTGGCTTTGCCAAAGGACAAGTACGCGGCACCAATCTATAAACTGACAAACAACATAAATTACAAATTAGCAATGATGTCGTCAGTCCAAATGTTCAGGTGCATATTTATGGGAAGTCTCTGTTTGTTCTTAATACAGATCACCATGTGGGATT[T/A]GGCCAATGGGAAGCTGCTGCGCACCATTACTGATGCCCATCCACCTGGCACTGCCATACTACATGTGAAAGTACTGCACTGCATGTTTTGTATGTGCTATATATGTTTTGTTGTTCAATCAAATTGAATAAAGCTTTTTTAATTCTCTTTTTGCAGTTCACTGACCACCCAGCGCTGGCTGTGTGTAATGACAGTGGCGGATCAGTTTTTGAGCTGTCATTCAGGTGAGACATGCTTTAAAAGCTTAAGATATGAACAAACTAAAGCATATTTGTGCAGTGGAAAGGGAATTTGGTTTGTCAAATCAGTATTGTAATGAAAGGAACTGGTGGGCAGGGGGCAGTAGAGCTTCATCTATTCTTACAGCACCCCAATGGCTGATTGTAATACAAATGTATTTTACCCATTTTCCCTTTAAACAAACTTGAAAAACTCAGTTAATGAGGTAACGCGGGTAATTTAGTTTTATAGTTTATTTGTACTTTAATGCATGCAAATTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa19514
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000041419 | None | None | 456 | None | 15 |
| ENSDART00000101779 | None | None | 455 | None | 15 |
| ENSDART00000131092 | Essential Splice Site | 1040 | 1263 | 35 | 43 |
| ENSDART00000134311 | None | None | 146 | None | 6 |
| ENSDART00000143639 | Essential Splice Site | 1064 | 1412 | 36 | 45 |
| ENSDART00000146783 | None | None | 235 | None | 9 |
Genomic Location (Zv9):
Chromosome 1 (position 29192525)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 29401140 |
| GRCz11 | 1 | 30205071 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTGGAGAGGAAAGGAGATGTACAGGGAGCTTTTCAAGTCCTGCTGCAGG[T/C]TTGAGTTTATCACATCACACATGCCTGCAGACAAAAAGAGAGAAAAAAAC
Long Flanking Sequence:
GCATGTGTACAGCATCTCTAAAGTCCTGCTAGCTCACCTTATTGCTGTTTCACTGCTCTTTGTATATACGTCTCCCTTTCTAGACCTGTCTGCTTGTTACTGTCAGTCTGTATTGCCTTTTTCCCCCCCTCTATGCCTTCTCTCACTTGCACTGTTTTTGTATTCATGGATTCAAGTATATTCATGGATGCCAGTTTGTGTTTTTCTGCTTTCCGCATAACCATTCAGTTTCAGAATGCGTTTGAATGTTTCATTATGGAAATGTTTTCTCCGAAACGAACAGTCTCACCTAAACGCACTTTTTCTGTTCATCCAGTGGGCGGCTTGGAGTGGATCATTTGTCTTGGTAATCTTGACAATTTGACTGCAACACAATTGACAGTCTTATCTTTGTCTTGTCTAATCACAGATCACAGAGAAACACAAGCTGCATGAGGCCACAGCCTACCTGCTGGAGAGGAAAGGAGATGTACAGGGAGCTTTTCAAGTCCTGCTGCAGG[T/C]TTGAGTTTATCACATCACACATGCCTGCAGACAAAAAGAGAGAAAAAAACACGGAAAAAGACATGGGTCCATATTAGCTTGAAATAAATGGTTGTTATCAGCTTTATACACCATTGTGATTCAAATACAATATATAAGACATAAAATACCTAACAAATAAAACCAGTTGTTAGTTTTAGACAACTATGTTGATTCATAATCTTTTTGATCTAACGTGGCTCCTCTTGTCCATATGTTTGCTTTAAAATATTTTTTAAACAACTTTCAAAAACCATCTTAGACATGAGCGTGTGTAGATGTTTAAGTGGATAGTTAAAACCAAACCAAAATTGAAAATTATGTCTGTTAAAATCTTTAATTAGTTTCTTAATTCTGCTAAAAATTAAAAAAAGGAAATTGTGAAAAACTTTGCAATCTTTGCAGTTCGGCGAAACAGGAAGTTGTTATACCTCAAGCCTGCATTGTCCGATCTGCCTTAAAATTCAGAGTCCTGTCCTGAA
Associated Phenotype:
Not determined