ZMP

si:ch73-107c13.2

Ensembl ID:

ENSDARG00000060260

ZFIN ID:

ZDB-GENE-081104-242

Description:

Novel protein similar to vertebrate farnesyl-diphosphate farnesyltransferase 1 (FDFT1) [Source:UniPr

Human Orthologue:

FDFT1

Human Description:

farnesyl-diphosphate farnesyltransferase 1 [Source:HGNC Symbol;Acc:3629]

Mouse Orthologue:

Fdft1

Mouse Description:

farnesyl diphosphate farnesyl transferase 1 Gene [Source:MGI Symbol;Acc:MGI:102706]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa6657	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa37183	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa6657

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000084724	Essential Splice Site	127	418	3	8
ENSDART00000133280	Essential Splice Site	156	179	2	3

Genomic Location (Zv9):

Chromosome 20 (position 53557855)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	53118247
GRCz11	20	52923664

KASP Assay ID:

554-5382.1 (used for ordering genotyping assays)

KASP Sequence:

CAGCCAGAGCAGAGAGAAGGACCGGCGCGTGCTGGAGGATTTCCCCACMG[T/A]CAGTACAACATCAACAACACACTCGAAACACTGCAGAACTTTTATTTCTT

Long Flanking Sequence:

TACGGATGATCTGAGTGCAGGAATACAGGCATGACCTTGAGGAACGCAAGACTATATTATTTGCTTGAAAATGCTAATTGATATTGCAGCTAAAAATGAGATAAAAACATTTCACAAATAAAAACAAATCATAGATTCACCCGTCTGAGGTGATGTCCTAAATAGATCCATTTATTTGTTATTTCAATGTAGACTGAAGAATATTCTAAGCAGGCGTAGCTGCGTACTCCACACAATAGCCTTCATACCCAATGCATGTTATGCAAATTGTATATATAATGAAAGTGCATTTAAATGTGTGAGTGTGTGTGTCAGGCATGCGGTGTGTATCTTCTACCTGGTTCTGCGAGCGCTGGATACGGTGGAGGATGATATGAGCATCCCGCTGGAGCAGAAGCTGCCGCTGCTGCAGGACTTCCACACGTTCCTCTACCAGCCCGAGTGGAGCTTCAGCCAGAGCAGAGAGAAGGACCGGCGCGTGCTGGAGGATTTCCCCACCG[T/A]CAGTACAACATCAACAACACACTCGAAACACTGCAGAACTTTTATTTCTTACTACTAAATATACAGTTATTAAAAAAAAAAAAACGATGCATGTAGTTTTGGGGCGACGCAGTGGCGCAGTGGGTAGTGCTGTCGCCTACATGTGGTACAGGTGAATTGGGTAGGCTAAATTGTCCATAGTGTATAAGTGTGTATAGATTTTTCCCAGTGATGGGTTGCAGCTGGATAGGCATCCTCTGTGTAAAACATATGCTGGATAAGTTGGCGGTTCATTCCGCTGTGGCGACCCCGGATTAATAAAGGGACTAAGCCGACAAGAAAATGAATGAACGAATGCATGTAGAATTATATACATTTATGCAACAGTGCAATATTTTGCCATAGTCAGCAACAAGCAGAGGACTCTCTACAGTTTGACAAATATTGCAGCTATTGGGCAACGTAATGTACTTTTAAGGCTTTTTTAGTTGAGAATGTCATTGTTTAGATTAGAGATCTGC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa37183

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000084724	Nonsense	191	418	5	8
ENSDART00000133280	None	None	179	None	3

Genomic Location (Zv9):

Chromosome 20 (position 53551633)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	53112025
GRCz11	20	52917442

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ATGTGGCGGGGCTGGTGGGCATCGGGCTCTCCCGGCTGTTCTCCGCATCC[C/T]AGCTGGAGGAGCCGGAGGTGGGCCGGGACACAGAGCTGGCCAACTCTATG

Long Flanking Sequence:

AGGTGTCCTAATAGTGTTTTTAGCAGTGTGGGACACATATACCACTGTCAACAGCTCAAACACATGTGTTTTGGTGTTTCGTGACGCTTTAATGCAACCTAACAGACTCCTCCTCCCCACCAAAACTGTTTGTTGTCATGGCACTGACAAAGAGGCGTGGTTAAGTATGTTAGCCACGCCCAATACATAATCTGACAATTGAACTGAACACTAACAGGAAGTGCATTTTCAGATTGCAATTAATGATTACAAGGACAAGCTATTTATTTTTCTTAATGACATGCACAGATGAATTGTTCAGCACAAAACTGGCAATGTGAGCTGACCAAATCAATATGGTTAGATTTGATGTCATGTGTACTTTAAATGTGGCTTTGGAAAAGGTGGAATGCTATCTCTTTAATTATTTGTGTTTGACGTGTCTGCATGTGTCTCCGCAGTACTGTCATTATGTGGCGGGGCTGGTGGGCATCGGGCTCTCCCGGCTGTTCTCCGCATCC[C/T]AGCTGGAGGAGCCGGAGGTGGGCCGGGACACAGAGCTGGCCAACTCTATGGGTCTGTTCCTGCAGAAGACCAACATCATCAGAGATTATCTGGAGGACCAGCAGCAGGGGAGAGCGTTCTGGCCAGAGGAGGTACACACACACACACACACATCAACATATACACTGCGGATGAGCTGAAATGACACCCGAATCCACGGCGTCATATTAATCATCCACCTGCCAGCGCATATAGTTTTATCTGATAAATGTATCCGCACCCGATCGTCACTTTAATAATTTAATTCTTAGTTTTAGGCATGATGATTATGGAAGCATACGAGTAGCATAATTCAATTCAAAATGTAATATGCAAAATGGCAATGCAATATGTTAAATGGCAATGTATTTCTGTATTTGAATTTGCATTTTCCAAGACATATGAGCAATGTTTGGTGCAGAATGAAAATGTAAATTAAATTACATTGTTTGCATTTCTCATTTCAAACACTGTTTTAATAT

Associated Phenotype:

Not determined