Busch Lab

ZMP

lrrn1

Ensembl ID:
ENSDARG00000060115
ZFIN ID:
ZDB-GENE-071126-1
Description:
leucine rich repeat neuronal 1 [Source:RefSeq peptide;Acc:NP_001124166]
Human Orthologue:
LRRN1
Human Description:
leucine rich repeat neuronal 1 [Source:HGNC Symbol;Acc:20980]
Mouse Orthologue:
Lrrn1
Mouse Description:
leucine rich repeat protein 1, neuronal Gene [Source:MGI Symbol;Acc:MGI:106038]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa18488 Nonsense Available for shipment Available now
hu3586 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa18488
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084389 Nonsense 134 717 2 2
Genomic Location (Zv9):
Chromosome 6 (position 43010376)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 43081540
GRCz11 6 43079076
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCAACATGTCACAACTCACGACTCTTCACCTGGAGGAGAACCAAATAGTT[G/T]AGATGCCTGACTTCAGTTTGCAGGAWCTYACCAATCTWCAGGAGCTGTAC
Long Flanking Sequence:
TATTCTGCAACACATCTATTGAATAAGAATTTCACCTCCCCATCTCTTTGGCGCTACAAGTATTCTAGCTCTGATCTGAGGGATAAACACTTACATTCAGAATGGCTAGAGGGACTTTCTTTTTGGTAGTGGAGGGGCAGATTTGTTTCATCCTGCTTCTGGCTGTACTTGGTCTCTCTTCGGTTCACAGTACAGAATGTCCGCAGCTTTGTGTGTGCGAGATCCGGCCTTGGTTCACACCCCAGTCCACCTACAGAGAAGCAACTACTGTTGATTGCAATGACCTTCATCTTACACGGATTCCCGGTAACCTGTCAGCCGACACACAGGTGTTGCTTCTGCAGAGTAACTACATTGCCAGAACTAGCGAGGAACTGGAGCAGTTACTGAATCTTACAGAACTCGATCTGTCCCAGAACAATTTCAGCAACATCCGTGACATCGGCCTGACCAACATGTCACAACTCACGACTCTTCACCTGGAGGAGAACCAAATAGTT[G/T]AGATGCCTGACTTCAGTTTGCAGGATCTTACCAATCTACAGGAGCTGTACATTAATCACAATCAGATCAGCTCCATTGCACCCAATGCCTTCGCCGGATTGCGTAACCTTCTGAGACTCCATTTGAACTCCAACAGACTCAAGGCCATCGACAGTCGTTGGTTTGAATCAACCCCCAACCTGGAGATCCTTATGATTGGGGAAAATCCTGTGGTCGGCATTCTTGATTTAAACTTCAAACCTCTTACCAACTTGAGAAGCCTTGTCCTGGCAGGAATGGAGCTCACTGACATCCCAGGCAATGCATTTGTTGGACTGGACAACCTGGAGAGTCTCTCCTTCTATGACAATAAACTAGTTCGGGTTCCCCAGACTGCTCTGCAGAAGCTACCAAACTTGAAATTTCTGGATTTGAACAAGAACCCAATACATAAAATTCAAGAGGGGGACTTTAAGAACATGCTCAGGCTGAAAGAACTTGGCATTAACAACATGGGAGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
hu3586
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000084389 Nonsense 407 717 2 2
Genomic Location (Zv9):
Chromosome 6 (position 43009557)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 43080721
GRCz11 6 43078257
KASP Assay ID:
554-0130.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCGATTCATGGAGCCTCTTTCTATGTTCTGCACCATGCCGATTGAAGTT[A/T]GAGGTCAGCGCGTGAGAGATGTGTTTTCTCGTGAACCTTCAGGCCAGTGT
Long Flanking Sequence:
ACAACCTGGAGAGTCTCTCCTTCTATGACAATAAACTAGTTCGGGTTCCCCAGACTGCTCTGCAGAAGCTACCAAACTTGAAATTTCTGGATTTGAACAAGAACCCAATACATAAAATTCAAGAGGGGGACTTTAAGAACATGCTCAGGCTGAAAGAACTTGGCATTAACAACATGGGAGAACTTGTGTCCATTGATCGCTTTGCATTGGATAACCTCCCTGAGTTGACCAAACTGGAAGCCACCAACAATCCCAAGTTTTCCTACGTGAGCCGTTTAGCGTTCCGTGATTTGCCGGCACTAGAGAGCCTAATGCTCAATAATAATGCCCTAAACTCCCTCTACCAGGCAACGGCTGATTCTCTGCCCAACCTGAGAGAGATCAGCATCCACAGCAACCCACTCCGCTGCGACTGTGTAATCCAGTGGATGAGTTCCAACAAGACAACCATTCGATTCATGGAGCCTCTTTCTATGTTCTGCACCATGCCGATTGAAGTT[A/T]GAGGTCAGCGCGTGAGAGATGTGTTTTCTCGTGAACCTTCAGGCCAGTGTCTCCCAATGATCTCCCATGACACTTTCCCCAATCACCTCAACCTGGACATCGGGATGACGGTAGATCTTGACTGTCGTGCAATGGCTGAACCCGAACCGGAAATATACTGGGTGACACCATCTGGTAACAAAGTCATGATGGATACAGTGTCTGATAAGTACCAACTTAATAGTGCAGGAACTCTGCGTATATCCTACATTCAGGTGGACGACTCTGGGCACTACACCTGTGTAGCACAAAATACAGAAGGAGCGGACACTCGGGTGACCGCCATTCGAGTTAACGGGACTCTTCTGGATAGCACGCAGCTTATGAAGATCTACGTTAAACACACCGAGTCCCATTCCATTCTAGTGTCCTGGAAAGTGAACTCCAACGTCATGACGTCCAATCTGAAGTGGTCATCGGCTACTATGAAAATCGACAACCCTCACATTACCTATACTGCT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
whole organism
ZFA:0001094
quality
PATO:0000001
normal
PATO:0000461