ZMP
lrrn1
Ensembl ID:
ZFIN ID:
Description:
leucine rich repeat neuronal 1 [Source:RefSeq peptide;Acc:NP_001124166]
Human Orthologue:
LRRN1
Human Description:
leucine rich repeat neuronal 1 [Source:HGNC Symbol;Acc:20980]
Mouse Orthologue:
Lrrn1
Mouse Description:
leucine rich repeat protein 1, neuronal Gene [Source:MGI Symbol;Acc:MGI:106038]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa18488 | Nonsense | Available for shipment | Available now |
hu3586 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa18488
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000084389 | Nonsense | 134 | 717 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 6 (position 43010376)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 43081540 |
GRCz11 | 6 | 43079076 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCAACATGTCACAACTCACGACTCTTCACCTGGAGGAGAACCAAATAGTT[G/T]AGATGCCTGACTTCAGTTTGCAGGAWCTYACCAATCTWCAGGAGCTGTAC
Long Flanking Sequence:
TATTCTGCAACACATCTATTGAATAAGAATTTCACCTCCCCATCTCTTTGGCGCTACAAGTATTCTAGCTCTGATCTGAGGGATAAACACTTACATTCAGAATGGCTAGAGGGACTTTCTTTTTGGTAGTGGAGGGGCAGATTTGTTTCATCCTGCTTCTGGCTGTACTTGGTCTCTCTTCGGTTCACAGTACAGAATGTCCGCAGCTTTGTGTGTGCGAGATCCGGCCTTGGTTCACACCCCAGTCCACCTACAGAGAAGCAACTACTGTTGATTGCAATGACCTTCATCTTACACGGATTCCCGGTAACCTGTCAGCCGACACACAGGTGTTGCTTCTGCAGAGTAACTACATTGCCAGAACTAGCGAGGAACTGGAGCAGTTACTGAATCTTACAGAACTCGATCTGTCCCAGAACAATTTCAGCAACATCCGTGACATCGGCCTGACCAACATGTCACAACTCACGACTCTTCACCTGGAGGAGAACCAAATAGTT[G/T]AGATGCCTGACTTCAGTTTGCAGGATCTTACCAATCTACAGGAGCTGTACATTAATCACAATCAGATCAGCTCCATTGCACCCAATGCCTTCGCCGGATTGCGTAACCTTCTGAGACTCCATTTGAACTCCAACAGACTCAAGGCCATCGACAGTCGTTGGTTTGAATCAACCCCCAACCTGGAGATCCTTATGATTGGGGAAAATCCTGTGGTCGGCATTCTTGATTTAAACTTCAAACCTCTTACCAACTTGAGAAGCCTTGTCCTGGCAGGAATGGAGCTCACTGACATCCCAGGCAATGCATTTGTTGGACTGGACAACCTGGAGAGTCTCTCCTTCTATGACAATAAACTAGTTCGGGTTCCCCAGACTGCTCTGCAGAAGCTACCAAACTTGAAATTTCTGGATTTGAACAAGAACCCAATACATAAAATTCAAGAGGGGGACTTTAAGAACATGCTCAGGCTGAAAGAACTTGGCATTAACAACATGGGAGAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
hu3586
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000084389 | Nonsense | 407 | 717 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 6 (position 43009557)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 43080721 |
GRCz11 | 6 | 43078257 |
KASP Assay ID:
554-0130.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCGATTCATGGAGCCTCTTTCTATGTTCTGCACCATGCCGATTGAAGTT[A/T]GAGGTCAGCGCGTGAGAGATGTGTTTTCTCGTGAACCTTCAGGCCAGTGT
Long Flanking Sequence:
ACAACCTGGAGAGTCTCTCCTTCTATGACAATAAACTAGTTCGGGTTCCCCAGACTGCTCTGCAGAAGCTACCAAACTTGAAATTTCTGGATTTGAACAAGAACCCAATACATAAAATTCAAGAGGGGGACTTTAAGAACATGCTCAGGCTGAAAGAACTTGGCATTAACAACATGGGAGAACTTGTGTCCATTGATCGCTTTGCATTGGATAACCTCCCTGAGTTGACCAAACTGGAAGCCACCAACAATCCCAAGTTTTCCTACGTGAGCCGTTTAGCGTTCCGTGATTTGCCGGCACTAGAGAGCCTAATGCTCAATAATAATGCCCTAAACTCCCTCTACCAGGCAACGGCTGATTCTCTGCCCAACCTGAGAGAGATCAGCATCCACAGCAACCCACTCCGCTGCGACTGTGTAATCCAGTGGATGAGTTCCAACAAGACAACCATTCGATTCATGGAGCCTCTTTCTATGTTCTGCACCATGCCGATTGAAGTT[A/T]GAGGTCAGCGCGTGAGAGATGTGTTTTCTCGTGAACCTTCAGGCCAGTGTCTCCCAATGATCTCCCATGACACTTTCCCCAATCACCTCAACCTGGACATCGGGATGACGGTAGATCTTGACTGTCGTGCAATGGCTGAACCCGAACCGGAAATATACTGGGTGACACCATCTGGTAACAAAGTCATGATGGATACAGTGTCTGATAAGTACCAACTTAATAGTGCAGGAACTCTGCGTATATCCTACATTCAGGTGGACGACTCTGGGCACTACACCTGTGTAGCACAAAATACAGAAGGAGCGGACACTCGGGTGACCGCCATTCGAGTTAACGGGACTCTTCTGGATAGCACGCAGCTTATGAAGATCTACGTTAAACACACCGAGTCCCATTCCATTCTAGTGTCCTGGAAAGTGAACTCCAACGTCATGACGTCCAATCTGAAGTGGTCATCGGCTACTATGAAAATCGACAACCCTCACATTACCTATACTGCT
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |