Busch Lab

ZMP

zgc:162584

Ensembl ID:
ENSDARG00000059902
ZFIN ID:
ZDB-GENE-050809-9
Description:
vacuolar protein sorting 16 [Source:RefSeq peptide;Acc:NP_001091659]
Human Orthologue:
VPS16
Human Description:
vacuolar protein sorting 16 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:14584]
Mouse Orthologue:
Vps16
Mouse Description:
vacuolar protein sorting 16 (yeast) Gene [Source:MGI Symbol;Acc:MGI:2136772]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa20635 Nonsense Available for shipment Available now
sa14249 Nonsense Available for shipment Available now
sa20634 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa20635
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000083820 Nonsense 298 835 9 22
Genomic Location (Zv9):
Chromosome 6 (position 8680126)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 8880096
GRCz11 6 9115635
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGGACGGGCTTCTCCTGGTGGTCGGAGAGTGTAAAGAAACAATTCAGTA[T/A]CAACTGGATGATGATTCAATCCTGGTCCCGGAGCTAGATGGGGTTCGGAT
Long Flanking Sequence:
AATCGTTTCTAGAGTTGAACACAAAGGAGGACATTTTGAAGAAAGCTGAAGACCTGTAGCCGTTGACTTCCATAGTAGGGAAAAAACGAATACTACAAAAGTCGATGGTTACAGATTTCTTCAAAATATCTTCTTTTGTGTTCAACAGAAGAAACATTTAAACAAGTTAAAGGTGAGTAAATCATAACAGAATGTTCATTTTGAGTGGACTATTCCTTTAAACCTTCATTACTTTGTTGATAATTCTGCGTCTGTTAATGTTTTCTTGATGTAGGAGAAACTCAGTGAGGTCGAAACCAAAATCAAAACACCCCCCAGACAGATGGCATGGTAGGAAACCATTTTACCCTTTTTATGCATATTTTTCACTCACGATTTGTATTTCATTACTTTACTTTTTCTTGTAGGTGTCGCAGGCCCAAGAGTCAGGAGCCTTCGGCAGTGGTCATGTGGGACGGGCTTCTCCTGGTGGTCGGAGAGTGTAAAGAAACAATTCAGTA[T/A]CAACTGGATGATGATTCAATCCTGGTCCCGGAGCTAGATGGGGTTCGGATCATCAGTGGAACACACCATGAGCTTTTGCAAGAGGTCCCAGGTTAGAAAATGCATTGGGAAAAATGTCCACTGCTATTTAAAAGTGTTGGGTCTATAAGAGTGTTTTTAAAAGACTTACTTAAAGGGATAGTTTACCCAAAAATGTAAATTGTCTCCCCTCTAGTTGTTGCATACATTTACGAGTTTCTTTTTCTCTGTTGAACACAACTGAACATATTTAAAAGAAAGCTGGAAAGTGGTCACCTTTAACTTCCATTGTAGGACAATCAAATACTATGGAAGTCAATGGTTACAGGCCTTGGTTCGCTTGGTTCAAAATATCTTTTTTGTGTTTAACAGAAGAAAGAAACTCATAAAGGTGAACAAGTAAAGGGTGAGTAAATGATGACAAAATTTTCATATTTGCGTGAACTTTCCCTTTAATTTCTGTAATTGCAGTGTTTAATCAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14249
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000083820 Nonsense 353 835 10 22
Genomic Location (Zv9):
Chromosome 6 (position 8679308)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 8880914
GRCz11 6 9116453
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTGCCTCAATGGCTCCTGGAGCTTTACTGCTGGAGGCACATAAAGAATA[T/G]GAGGTGAGACAYATTTACTATTYAGGACAAACATTTYTTTAACCTTAGCA
Long Flanking Sequence:
TCAAATACTATGGAAGTCAATGGTTACAGGCCTTGGTTCGCTTGGTTCAAAATATCTTTTTTGTGTTTAACAGAAGAAAGAAACTCATAAAGGTGAACAAGTAAAGGGTGAGTAAATGATGACAAAATTTTCATATTTGCGTGAACTTTCCCTTTAATTTCTGTAATTGCAGTGTTTAATCACATGATCTCTTCAGAAGGCATTCTAGCATGCTGATTTACTACTGAATTTCTTATTATTATCAGCGCTTATTACAATTATAGTGAATATTAACATTTGAATGTTTCACTGGGACTGGGAATAGTTTAATACATGCTGCCTGAGTTAAAGTATGTATTCTAAAGCTTTTGACCCCAAATGTACGAATGAATCGAATGGTTTTGGTCTCCATGTTTTACAAATGCACAAGTGTTATGATTTTCTGCAGGTGCTTGTGAGGAGATATTTAAAATTGCCTCAATGGCTCCTGGAGCTTTACTGCTGGAGGCACATAAAGAATA[T/G]GAGGTGAGACACATTTACTATTCAGGACAAACATTTCTTTAACCTTAGCACAGTATCCAAAAAGCATACAACTATAATAATGATAACTATAATTTGATAATTAGGAGTATTTTAAAAGTTGCACACTTTTATAAAAATGTGCAAAGTGTCTTTAGTTTTTACTTATTGAAATATTTCCCCCCAAAAATTAAATCCTGCCATCATTTAATCATTATTCACTTGTTCTCCAGGCTTTTGTTAAATACGAAGGAAGAATGTTGTGGGGAAAAACAGCCATTGTATATTATGTTTTGTTTCTATTATCAATTTCAATGGCTGTTTTTTCCCCCAACATTCTTCAAAGCATCTTCTTTTAAACAAAGAAAGAAATTCAGTTTAGAACCATTTGAGTTAGAGTAAATTTTAATTTTTTGGTGGGAACTATATCTTTAAAGTTTTCTGAAAGGGACAGGTAACCCCAAATTGTTCATTTGCGTTGGTGATTCATAAATAGCTAATAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20634
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000083820 Nonsense 453 835 12 22
Genomic Location (Zv9):
Chromosome 6 (position 8676309)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 8883913
GRCz11 6 9119452
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCTGACCCACACTCAGTTCAAGCAGATGACCGTACAGGTGCTCATCGAC[A/T]GGTGAATAGGCTGTTTGAGGGGGCAAGGATTTCACTTTATTGGAATAATA
Long Flanking Sequence:
TCAGAAGGCAGACGAGTATCTGAGAGAGATTAAAGAGCAGAGTCTGCTGAGCGAAGCGGTACAACAGTGTGTGGAAGCCGCCGGGCATGAACATGAACCCGAGACACAGAAAACACTCTTGAGGGTGAGACACACATCTATCAGTAATTCAATTTAATTTTAGTTTATTTGTATAGAGCTTTTCACTATAATTATTGTTTCAAAGAAGCTTTACAAAAGGTGCACATTACTTACCTTGGATCTCATTAAGTGGCGCTGCACATAAAAAGAGAAGACACATTTCATTTACAGTAAGGAATGAATTTAACTTATCTCCTTGTGTCTTGCTCTCTCTGCAGGCGGCTTCGTTTGGGAAGTGTTTCTTGAGTAATTTTCCTCCGGAGCAGTTCGTCAGTATGTGCCGAGACCTGCGAGTGTTGAATGCTGTTCGAGATTATACCATAGGCATTCCTCTGACCCACACTCAGTTCAAGCAGATGACCGTACAGGTGCTCATCGAC[A/T]GGTGAATAGGCTGTTTGAGGGGGCAAGGATTTCACTTTATTGGAATAATATCGATTATTCAAATGAATATATGACTTTTACCTCTGTTTTATTAGATTGGTTTATCGTAAACTCTATCCACTGGCTATTGAGGTTTGCAGATATCTGAAGACTCCGGAATATCAGGGAGTAAGTCGTGTGCTCAAACACTGGGCCTGCTTCAAGGTATGTGAATGTGTGTTTGTGTGTGTCAGGGTCAGAATTGAAATTTTTCTTGTTTGTTTGTTGTTGTTGTTGTTTTTTTTTGTAATGGCCACGTTTTTTCCAATGTATTTTTTGTAATTATGAATTTTATGATAATTATTTAAATTGTAACTGTGTTGTCTTTTATGTCAAATATAGTTAATCGTCGTACTAAAATTCACATTTCAAAACAGGAAAAGTTTAGGCTGCAATAATATGTCAAAAAATGTCTTTTGTTTCTGGTAATATTATAATAGTGGCTATTAATGTTTATAAAT
Associated Phenotype:
Not determined