ZMP
zgc:162584
Ensembl ID:
ZFIN ID:
Description:
vacuolar protein sorting 16 [Source:RefSeq peptide;Acc:NP_001091659]
Human Orthologue:
VPS16
Human Description:
vacuolar protein sorting 16 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:14584]
Mouse Orthologue:
Vps16
Mouse Description:
vacuolar protein sorting 16 (yeast) Gene [Source:MGI Symbol;Acc:MGI:2136772]
Alleles
There are 6 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa20635 | Nonsense | Available for shipment | Available now |
sa14249 | Nonsense | Available for shipment | Available now |
sa20634 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa20635
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000083820 | Nonsense | 298 | 835 | 9 | 22 |
Genomic Location (Zv9):
Chromosome 6 (position 8680126)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 8880096 |
GRCz11 | 6 | 9115635 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGGACGGGCTTCTCCTGGTGGTCGGAGAGTGTAAAGAAACAATTCAGTA[T/A]CAACTGGATGATGATTCAATCCTGGTCCCGGAGCTAGATGGGGTTCGGAT
Long Flanking Sequence:
AATCGTTTCTAGAGTTGAACACAAAGGAGGACATTTTGAAGAAAGCTGAAGACCTGTAGCCGTTGACTTCCATAGTAGGGAAAAAACGAATACTACAAAAGTCGATGGTTACAGATTTCTTCAAAATATCTTCTTTTGTGTTCAACAGAAGAAACATTTAAACAAGTTAAAGGTGAGTAAATCATAACAGAATGTTCATTTTGAGTGGACTATTCCTTTAAACCTTCATTACTTTGTTGATAATTCTGCGTCTGTTAATGTTTTCTTGATGTAGGAGAAACTCAGTGAGGTCGAAACCAAAATCAAAACACCCCCCAGACAGATGGCATGGTAGGAAACCATTTTACCCTTTTTATGCATATTTTTCACTCACGATTTGTATTTCATTACTTTACTTTTTCTTGTAGGTGTCGCAGGCCCAAGAGTCAGGAGCCTTCGGCAGTGGTCATGTGGGACGGGCTTCTCCTGGTGGTCGGAGAGTGTAAAGAAACAATTCAGTA[T/A]CAACTGGATGATGATTCAATCCTGGTCCCGGAGCTAGATGGGGTTCGGATCATCAGTGGAACACACCATGAGCTTTTGCAAGAGGTCCCAGGTTAGAAAATGCATTGGGAAAAATGTCCACTGCTATTTAAAAGTGTTGGGTCTATAAGAGTGTTTTTAAAAGACTTACTTAAAGGGATAGTTTACCCAAAAATGTAAATTGTCTCCCCTCTAGTTGTTGCATACATTTACGAGTTTCTTTTTCTCTGTTGAACACAACTGAACATATTTAAAAGAAAGCTGGAAAGTGGTCACCTTTAACTTCCATTGTAGGACAATCAAATACTATGGAAGTCAATGGTTACAGGCCTTGGTTCGCTTGGTTCAAAATATCTTTTTTGTGTTTAACAGAAGAAAGAAACTCATAAAGGTGAACAAGTAAAGGGTGAGTAAATGATGACAAAATTTTCATATTTGCGTGAACTTTCCCTTTAATTTCTGTAATTGCAGTGTTTAATCAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14249
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000083820 | Nonsense | 353 | 835 | 10 | 22 |
Genomic Location (Zv9):
Chromosome 6 (position 8679308)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 8880914 |
GRCz11 | 6 | 9116453 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTGCCTCAATGGCTCCTGGAGCTTTACTGCTGGAGGCACATAAAGAATA[T/G]GAGGTGAGACAYATTTACTATTYAGGACAAACATTTYTTTAACCTTAGCA
Long Flanking Sequence:
TCAAATACTATGGAAGTCAATGGTTACAGGCCTTGGTTCGCTTGGTTCAAAATATCTTTTTTGTGTTTAACAGAAGAAAGAAACTCATAAAGGTGAACAAGTAAAGGGTGAGTAAATGATGACAAAATTTTCATATTTGCGTGAACTTTCCCTTTAATTTCTGTAATTGCAGTGTTTAATCACATGATCTCTTCAGAAGGCATTCTAGCATGCTGATTTACTACTGAATTTCTTATTATTATCAGCGCTTATTACAATTATAGTGAATATTAACATTTGAATGTTTCACTGGGACTGGGAATAGTTTAATACATGCTGCCTGAGTTAAAGTATGTATTCTAAAGCTTTTGACCCCAAATGTACGAATGAATCGAATGGTTTTGGTCTCCATGTTTTACAAATGCACAAGTGTTATGATTTTCTGCAGGTGCTTGTGAGGAGATATTTAAAATTGCCTCAATGGCTCCTGGAGCTTTACTGCTGGAGGCACATAAAGAATA[T/G]GAGGTGAGACACATTTACTATTCAGGACAAACATTTCTTTAACCTTAGCACAGTATCCAAAAAGCATACAACTATAATAATGATAACTATAATTTGATAATTAGGAGTATTTTAAAAGTTGCACACTTTTATAAAAATGTGCAAAGTGTCTTTAGTTTTTACTTATTGAAATATTTCCCCCCAAAAATTAAATCCTGCCATCATTTAATCATTATTCACTTGTTCTCCAGGCTTTTGTTAAATACGAAGGAAGAATGTTGTGGGGAAAAACAGCCATTGTATATTATGTTTTGTTTCTATTATCAATTTCAATGGCTGTTTTTTCCCCCAACATTCTTCAAAGCATCTTCTTTTAAACAAAGAAAGAAATTCAGTTTAGAACCATTTGAGTTAGAGTAAATTTTAATTTTTTGGTGGGAACTATATCTTTAAAGTTTTCTGAAAGGGACAGGTAACCCCAAATTGTTCATTTGCGTTGGTGATTCATAAATAGCTAATAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20634
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000083820 | Nonsense | 453 | 835 | 12 | 22 |
Genomic Location (Zv9):
Chromosome 6 (position 8676309)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 8883913 |
GRCz11 | 6 | 9119452 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTCTGACCCACACTCAGTTCAAGCAGATGACCGTACAGGTGCTCATCGAC[A/T]GGTGAATAGGCTGTTTGAGGGGGCAAGGATTTCACTTTATTGGAATAATA
Long Flanking Sequence:
TCAGAAGGCAGACGAGTATCTGAGAGAGATTAAAGAGCAGAGTCTGCTGAGCGAAGCGGTACAACAGTGTGTGGAAGCCGCCGGGCATGAACATGAACCCGAGACACAGAAAACACTCTTGAGGGTGAGACACACATCTATCAGTAATTCAATTTAATTTTAGTTTATTTGTATAGAGCTTTTCACTATAATTATTGTTTCAAAGAAGCTTTACAAAAGGTGCACATTACTTACCTTGGATCTCATTAAGTGGCGCTGCACATAAAAAGAGAAGACACATTTCATTTACAGTAAGGAATGAATTTAACTTATCTCCTTGTGTCTTGCTCTCTCTGCAGGCGGCTTCGTTTGGGAAGTGTTTCTTGAGTAATTTTCCTCCGGAGCAGTTCGTCAGTATGTGCCGAGACCTGCGAGTGTTGAATGCTGTTCGAGATTATACCATAGGCATTCCTCTGACCCACACTCAGTTCAAGCAGATGACCGTACAGGTGCTCATCGAC[A/T]GGTGAATAGGCTGTTTGAGGGGGCAAGGATTTCACTTTATTGGAATAATATCGATTATTCAAATGAATATATGACTTTTACCTCTGTTTTATTAGATTGGTTTATCGTAAACTCTATCCACTGGCTATTGAGGTTTGCAGATATCTGAAGACTCCGGAATATCAGGGAGTAAGTCGTGTGCTCAAACACTGGGCCTGCTTCAAGGTATGTGAATGTGTGTTTGTGTGTGTCAGGGTCAGAATTGAAATTTTTCTTGTTTGTTTGTTGTTGTTGTTGTTTTTTTTTGTAATGGCCACGTTTTTTCCAATGTATTTTTTGTAATTATGAATTTTATGATAATTATTTAAATTGTAACTGTGTTGTCTTTTATGTCAAATATAGTTAATCGTCGTACTAAAATTCACATTTCAAAACAGGAAAAGTTTAGGCTGCAATAATATGTCAAAAAATGTCTTTTGTTTCTGGTAATATTATAATAGTGGCTATTAATGTTTATAAAT
Associated Phenotype:
Not determined