ZMP
slc32a1
Ensembl ID:
ZFIN ID:
Description:
vesicular inhibitory amino acid transporter [Source:RefSeq peptide;Acc:NP_001074170]
Human Orthologue:
SLC32A1
Human Description:
solute carrier family 32 (GABA vesicular transporter), member 1 [Source:HGNC Symbol;Acc:11018]
Mouse Orthologue:
Slc32a1
Mouse Description:
solute carrier family 32 (GABA vesicular transporter), member 1 Gene [Source:MGI Symbol;Acc:MGI:1194
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa14045 | Nonsense | Available for shipment | Available now |
| sa2297 | Nonsense | Confirmed mutation in F2 line | Not yet available |
Mutation Details
Allele Name:
sa14045
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000083453 | Nonsense | 12 | 530 | 1 | 2 |
Genomic Location (Zv9):
Chromosome 6 (position 59811360)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 60152176 |
| GRCz11 | 6 | 60147084 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CGTTTAGCAGARCAATCATGGCTACGTTAATAAGAAGCAAGATCTCGAAT[A/T]AGCTGTCCAAYGCGGCCACTACCGTCACCAATAARTCGCAGGCGAAGGTG
Long Flanking Sequence:
CTGACGGTGACACGTGCCTCCCTCTCAACACCCCCGAGCTCCCGTGTACCGCATTGGCATCAGCGACGGCCACTGAAACACAGGAGTCGAAGCTGTGCCACGGATACAGAGGACGGAAAGCCCGCGTAAAGCTGCGAGCATTCTCCTTTACGCACCGGACCATAAACTTGCTCTCGCCCGAAACGCGCGTCAAGAGTTCGGCCAGAATAGAGTGAGAGAGGAGCGGGCCAACAGGATGCGGGCGCCAGGCATCATCTACGTCTGAAAGTGACATGAACCACGGAATTAGCCAAAACAGCAGGCGTGATTTCAGTCAGAACCGGAGATAACGAATACGCGTCACCACGAGAGTCCGTTCTCTTCTCGCGCAGACAAAGAGCTCCGGTCACGCACTAAATCTGAAATATCTAGAGGAAAAAAACATTCGCTGAGGTATCTAGACACCTGTCTCGTTTAGCAGAACAATCATGGCTACGTTAATAAGAAGCAAGATCTCGAAT[A/T]AGCTGTCCAACGCGGCCACTACCGTCACCAATAAGTCGCAGGCGAAGGTGAGCGGGATGTTCGCCAGACTGGGCTTCCAGGCCGCCACCGATGAGGAGGCTTTGGGTTTCGCCGCCTGCGATGATCTGGACTATGACCACAGGCAGGGGCTTCAAATGGACATCCTAAAAAACGATGAGATGGGGGGAGAGGGCGGCGGGGAAATGGGGGAAGATGGGATGGCCGAAGGGGACAGCCATTACCAGAGGGATGGAACGGGTCCACCGCCCTCAGCATCCAAAGACGGGGGACTTTGCTCCGAAATTGGCAACCCGGACAAGCCCAGAATCACTGCTTGGGAAGCGGGCTGGAACGTGACCAACGCGATCCAGGTAAAGGCGCATCGTCAGGCGTCACGCGTCATGGCGATGCATAGCTGTGAACAAATTCATGTCCTAAAGTTGTGTGGAAATGCGTAAAAGCGAGTTGCGGTATGAATGTGAACAGTCTGTTTTATTAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2297
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000083453 | Nonsense | 248 | 530 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 6 (position 59809246)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 60150062 |
| GRCz11 | 6 | 60144970 |
KASP Assay ID:
554-2698.1 (used for ordering genotyping assays)
KASP Sequence:
AACCTGATGTACAACAGCTTCCCCACCCTCCCAGTGTCCCAGAGGTCCTG[G/A]GCCATCATCGCCACCGCCGCTCTCCTGCCTTGCGCCTTCCTCAAGAACCT
Long Flanking Sequence:
TATGCATTTGATCAGAGAACAAAGAAGGTTACACCAAAAACGCAGCATACACTACAGGCATTTGATCATAGATGTGTAGCGATGTTAGGTCACTGTGAGTGATGATGTGCACAAAAGCAGCGGTCTGTGGTGTAAAGCGCTTGCTGTGCTTCTCTCCCGCAGGGCATGTTCGTGCTCGGGTTACCCTACGCCATTCTCCACGGTGGATATCTCGGACTGTTCCTCATTATATTCGCCGCCGTCGTGTGCTGCTACACAGGCAAAATCCTCATCGCCTGCCTCTATGAAGAGAACGAAGACGGCCAGTTGGTGCGAGTGAGAGACTCGTACGTGGACATCGCCAACGCCTGCTGCGCGCCGCGCTTCCCCGCGCTCGGAGGACACGTCGTCAACGTGGCACAGATCATCGAGCTCGTCATGACCTGCATTTTGTACGTCGTGGTCAGCGGGAACCTGATGTACAACAGCTTCCCCACCCTCCCAGTGTCCCAGAGGTCCTG[G/A]GCCATCATCGCCACCGCCGCTCTCCTGCCTTGCGCCTTCCTCAAGAACCTCAAAGCCGTTTCCAAGTTCAGCTTGCTCTGCACCCTAGCGCACTTCGTCATCAACATCCTAGTGATCGCCTACTGCCTGTCCAGGGCGCGAGACTGGGCGTGGGACAAGGTCAAGTTCTACATCGACGTCAAGAAGTTCCCCATCTCCATCGGCATCATCGTGTTCAGCTACACCTCGCAGATCTTCCTGCCCTCGCTGGAGGGGAACATGCAGAAGCCCAGCGAGTTCCACTGCATGATGAACTGGACGCACATCGCGGCCTGCATCCTCAAGGGCCTGTTCGCCCTGGTGGCTTACCTGACGTGGGCTGATGAAACCAAGGAGGTGATCACGGACAACCTGCCGTCCAGCATCCGCGCCGTCGTCAACCTGTTCCTGGTGTCGAAGGCGCTGCTGTCGTACCCGCTGCCGTTCTTCGCCGCGGTGGAGGTCCTCGAAAAGACTTTCTT
Associated Phenotype:
This allele has been associated with this phenotype by genetic linkage analysis and may not be causal.
See FAQs for more info.
See FAQs for more info.
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 4 ZFS:0000036 |
eye ZFA:0000107 |
decreased size PATO:0000587 |
abnormal PATO:0000460 |
| Larval:Day 4 ZFS:0000036 |
head ZFA:0001114 |
malformed PATO:0000646 |
abnormal PATO:0000460 |
| Larval:Day 4 ZFS:0000036 |
otolith ZFA:0001617 |
present in fewer numbers in organism PATO:0001997 |
abnormal PATO:0000460 |
| Larval:Day 4 ZFS:0000036 |
trunk ZFA:0001115 |
curved PATO:0000406 |
abnormal PATO:0000460 |
| Larval:Day 4 ZFS:0000036 |
whole organism ZFA:0001094 |
decreased size PATO:0000587 |
abnormal PATO:0000460 |