Busch Lab

ZMP

si:ch211-204a13.4

Ensembl ID:
ENSDARG00000059674
ZFIN ID:
ZDB-GENE-060503-399
Description:
low-density lipoprotein receptor-related protein 12 [Source:RefSeq peptide;Acc:NP_001076537]
Human Orthologue:
LRP12
Human Description:
low density lipoprotein receptor-related protein 12 [Source:HGNC Symbol;Acc:31708]
Mouse Orthologue:
Lrp12
Mouse Description:
low density lipoprotein-related protein 12 Gene [Source:MGI Symbol;Acc:MGI:2443132]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa43251 Nonsense Mutation detected in F1 DNA Not yet available
sa36809 Splice Site, Nonsense Available for shipment Available now
sa17601 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa43251
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109024 Nonsense 166 874 5 7
ENSDART00000134256 Nonsense 142 850 5 7
Genomic Location (Zv9):
Chromosome 19 (position 17184750)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 13471913
GRCz11 19 13390379
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTGCTTGCAATTTGCAGGGAAATCAGAAGAAGCCAGCTGCAAACCTGAC[C/T]AATTTCACTGCGCCAATGGGAAATGTATCCCGGAGTCATGGAAGTGCAAC
Long Flanking Sequence:
AATTATATTCTTAAGAATAATACCATTATTATCCTGAAGGTTTTGGAAAAGACTCTAAACAAAGTCATTCCCACTTCACAGTATGATCTAAACTGTTTGAACTAATCTTACTATATCATCTAAGAGACCAGAATATCATAGACACTATTTGTATTTCACCATTTTGAATTGATAAATTGTGTACTTGAATGCAATGGCAGTGACTTTTGATAAAAGCAGCTGGCAAATGCATATATGTAAATGCTAATTTCTATTAATATTGAAGTATGACTTTGGTTGTTGTAAAAGAACTTAAACACAAAACATTATCTAAAAAGTCGGATGAAATAGATCATACTCTTGGAGGTTACGGTTTCATATCTTGCAGATTAAAAGAATCCTCTGAATCATAAATCTTGCAAATATCCATTAATCAAAGATTACTGTTACTGTCTCTTCAAAAGGGTAATATCTGCTTGCAATTTGCAGGGAAATCAGAAGAAGCCAGCTGCAAACCTGAC[C/T]AATTTCACTGCGCCAATGGGAAATGTATCCCGGAGTCATGGAAGTGCAACACTATGGATGAATGTGGCGATAACTCGGACGAGGAGTTATGCGTACAGCCAAATCCCTCTGCGTTCTTCTCTTTCCAGCCCTGTGCCTTCAACCAGTTTCCTTGTCTTTCACGTTACACCCGTGTTTACACCTGCCTGCCAGAGTCTCTTAAATGTGATGGCAGTATTGATTGCCAGGACTTGGGTGATGAGATCGATTGTGACGTGCCCACCTGTGGTGAATGGCTCCGCAATTTCTACGGTACTTTCAGCTCACCCAACTATCCTGACTTCTATCCACCTGGCAGTAACTGCACATGGCTGATCGACACTGGTGACCACCGAAAGGTTATCTTGCGCTTTATGGACTTTAAACTTGATGGTACAGGCTATGGCGATTACGTTAAAGTCTACGACGGACTAGAGGAGAACCCCAGACGCCTATTGCGTGTGTTGACTGCATTCGACTCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa36809
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > A
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109024 Nonsense 562 874 6 7
ENSDART00000134256 Splice Site None 850 None 7
Genomic Location (Zv9):
Chromosome 19 (position 17183420)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 13473243
GRCz11 19 13391709
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGCTGATTGCTCAAGGACTGATCCCCCCAGTGGAAGATTTTCCTGTCTG[C/A]TCTGGAAATCAGGCAAGGAGACAAATAAGAAAATTGCATATTTAAATGCG
Long Flanking Sequence:
CTGCTTTTTCTGCCAACCTGGAAATTTCCACTGCAAGAACAACCGCTGTGTTTTTGAAAGCTGGGTATGTGACGCGCAAGACGACTGTGGGGATGGAAGCGATGAGGAGAGCTGCCCGGTAATTGTACCCACAAGAGTCATCACTGCTGCTGTAATTGGGAGTTTGATCTGTGGTCTGCTGTTGGTCATTGCTTTGGGCTGCACCTGCAAACTGTACTCGCTTCGAATGTTTGAGCGCAGGTAAGCTATTTGTTAAGTAGATTGTTGAGCCAGAAAACACAAAAAAAAATAATCAGCATTTTTGTGTGTGCTTCTGTGATGCTCTCTCTCTCTCTGTCAACTATTGACTAGAAATTCCATTGGGTTTGTTGTTCTTCCAGGTCATTTGAGACTCAGCTCTCTAGAGTGGAAGCAGAATTACTGAGAAGAGAAGCTCCGCCGTCGTATGGGCAGCTGATTGCTCAAGGACTGATCCCCCCAGTGGAAGATTTTCCTGTCTG[C/A]TCTGGAAATCAGGCAAGGAGACAAATAAGAAAATTGCATATTTAAATGCGTCACAGACTGGAAAATCTAGATTTACCTAGGTATAGCTGAAAAAGGGTTCTGTACATGGAAATGACATGCCATGAGGCCCAAACCCTATTGTTTCCTTATTCTCATGTAAATCCTGCGAGTGTAAAGTCTTGGTGAAAAACAGGCCTATTGGAGCAAAACATCCACTCTGACGATCCACACAGGATTATTAATATGCACACCTCAGGCTGTGTTTAACTGCCTGAGTATACACGTTTAATGCACATTTAGTCATTATTTGGTATTTCTATGAGTTATTTCTGGGGTTATAAATTATCAATATCACATGAGTAGCAGTGCGATGTGGCTGTATATCAGCACTGGTGGGAGGTGTGTGTTGGCTTTAGTGTCCCACTAGTGGCTATATACAGCCATCGCACTGCAACGAATGTGATATTGCATTTATACAACAGTTCGATGGCATAGTTGTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17601
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000109024 Nonsense 813 874 7 7
ENSDART00000134256 Nonsense 789 850 7 7
Genomic Location (Zv9):
Chromosome 19 (position 17179237)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 13477426
GRCz11 19 13395892
KASP Assay ID:
2261-3136.1 (used for ordering genotyping assays)
KASP Sequence:
CAGAGGCCGGTTCCCTGGACAGTGATGAGAGCTCCAGGCCCCTACTGGAA[C/T]AAGGTCTGGAGCAGGTCTTTGGCCCACATCTTGCTCCGGCTGCYGTCTCT
Long Flanking Sequence:
ACTCAGATGACACTGACACTGAGAGCGACCACCATTCCCGCAGGGATGTTCCTGGAGCTGTTGGAGGCCTGATGGCACCACTGCCACAGAAAACTCCCCCTACAACAGCTGTGGAAGCCATCGTCTCAGTGTCTGCCAGCTCTGCTCCACTGGTCAGCCGGGAGAGCAGCATCTCTGAAAGCATCTCTGAAAGTTCTGGAGTAACTGGACCTTCGTGTGCTACTACTAATTCTAGTACTTCTGCAAGGAGCCCCTTCGTCAGTGCTCTAAACCGGGTCACCCGCAGCCTGCGCTGGATTCGTTTCTCATTAGGGCGAGCTGGTGATGGAGGGACCACTGGCATCGAACAGAATCACAGCCCATTGCGGCAGCTAGAGCAAGGTAGTGCGGGGTGCACTGGTGTCATTAGGGGAGAGGACGAAGATGATGTGGAGCTCCTCATTCCCGTGTCAGAGGCCGGTTCCCTGGACAGTGATGAGAGCTCCAGGCCCCTACTGGAA[C/T]AAGGTCTGGAGCAGGTCTTTGGCCCACATCTTGCTCCGGCTGCCGTCTCTCTCAGAGGACAACTGGGGGTTCGGGACGGCCCCTGTGAACACTGTGGAATTGTCCATACAGCGCGAATCCCGGACGCTTGTCTGGAGGCAACAGCAAAAACAGAAACTAGTGATGATGATTCTTTGCTGCTCTGTTAAGACTTAGAGGAACTCCCTGACTCAGTACGTGACCCATATGAAATGCCCCTGCTCACAGCTTGCCATTTTTGTTATCGCCTCCTAGTGGAGCGGAGGTTGAATGTTTTTAGACGCGTCTCCTTTTTACAAAAAGGAAGAGCTTCGGAAATCAGGTACTTTTAAAGACCAGTCCGTAAAAATCATACGGAGTACGAGAGCTCCCCAATCCCACTGTTCCTTCCACTGTGCAATATTAGTATTCGTTGAGATGTTTACCAGGTCAAAGTCTATTTTTCTGGAGTCAAATTAAGCTCACAAAGTGTAAAGTGTGAG
Associated Phenotype:
Not determined