ZMP
ubfd1
Ensembl ID:
ZFIN ID:
Description:
ubiquitin domain-containing protein UBFD1 [Source:RefSeq peptide;Acc:NP_001076299]
Human Orthologues:
AC104771.1, UBFD1
Human Description:
ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:30565]
Mouse Orthologue:
Ubfd1
Mouse Description:
ubiquitin family domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:107301]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa33285 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa40141 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa33285
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000083053 | Nonsense | 67 | 279 | 2 | 7 |
ENSDART00000124026 | Nonsense | 78 | 290 | 2 | 7 |
ENSDART00000147777 | Nonsense | 67 | 153 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 3 (position 42656156)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 43252849 |
GRCz11 | 3 | 43953766 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGGGGAAAGAGATGGTGGACGTGAAAATCATTTGGAACAAAAACAAATA[T/A]GATCTTAAAATCCCTTTAGATGGCACCGGTGCCAAGCTGAAAGAGAAGAT
Long Flanking Sequence:
TAGACACTAGTAATTATTGTAAACATACACCATCTCTTTTGTGAAGTATTAAAAACATAAATTCAGAAAAGATCAGGAGTGTTGTCTAGTTTTCTTTCATAGGAGTTATAAAATGAAGGTGTTGTACATGTTTATTCTATAAAGATTTGCTTGTTTTGTTGATTTACTTTTGCATTTCTTTTATGTTTAGATATTACCAATACTTTACCCTATAAAGGGTCAACATAATACAAAAAAAAACTGCTTTTGATTGATGCCTTCTCCTCTGTTATTGTTCCCGCAGGAAGTGAGGTAGTAGGTATGGAGGCTGAGGTCACACAGAAGGTACCAGAAGTGTTGTGCGAAGCTGCGGGACAAGGAGACGAAGCAGGCAGCGAAGCAACATCTCTTACCGATGGTGAAAGCACATCAGCTGAGCCTGCTGCGGTCAGCAACGGAGAGGAAAGTGACGAGGGGAAAGAGATGGTGGACGTGAAAATCATTTGGAACAAAAACAAATA[T/A]GATCTTAAAATCCCTTTAGATGGCACCGGTGCCAAGCTGAAAGAGAAGATTCACGCTCTCACTGGTAATGTAACCCCATGTTCATGGAAGTTGTGGGTTTAGCATGATATTTATTTTAAGGGGTCCCAAATATGCTATTTCGAGGGTTCCTAATTTTGTTTTGGAGTCTTGTGCTATAGGTTTACATGGATCCAAGGTCTAAAAATACTTTTGCTTTCTCATGTTTCATTTTCGCAACACCTCATTTCTCAGAGTCACCCTTGATTTGGTCAAAGATTCAGTCTTTCAAAACTCTTGCTGTCCATTACACTGCTTCACTCTGATTGGTCAGGTGGCCCAGTCTGTTGTGGTAAAGTGGTGGAGGGATGACTTCAAAACCCAAATTGGCAATACAGTTTCTTAATACACTTAACAGCTTCAAGATTCATGTTGTAGATATGAGTGTGTGTAATTCAAAGTGTTGTCAAGTTTACTCTTAAAATTTCCAAAGACAATTTATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40141
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000083053 | Nonsense | 254 | 279 | 7 | 7 |
ENSDART00000124026 | Nonsense | 265 | 290 | 7 | 7 |
ENSDART00000147777 | None | None | 153 | None | 3 |
Genomic Location (Zv9):
Chromosome 3 (position 42667554)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 43241451 |
GRCz11 | 3 | 43942368 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGTTTGTTTGTCACTCCAGGCATTTCAGCTGGGTCCGACAGAAGCCTCA[C/T]AATATTGGGTCTACTGGGTGCCTGCACAGTTTGTTGATGCAATCAAAGAC
Long Flanking Sequence:
CTGTGTGGAGTTTGCATGTTCTCCCTGGGTTCACGTGGGTTCCGTCTGGGTGCTCTGGTTTCCCCCACAGTCCAAAGACATGCACTATAGGTGAATTGAATAAACTAAACTGTCCATAGTGTATGTGTGTGAATAAGTGTATGGATGTTTCCCAGTACTGGGTTGCAGCTGGAAGGGCATCTGCTGAATAAAACATATGCTGGATGAGTTGTCGGTTCATTCCGCTGTGATGACCCCTGATGAATAAAGGGACTAAGCTGAAGGAAAATTAGTGAATAAATGCAATCTTCAAAGAGCACAAGAGTCGTCTATCAGAAAAACTAAAATCTGCATTATTTATTTTAATTTGGATTGTATTTTTTCTAGTTTGGTGCTGCTAGAGATCCATATGACAAAATCACCACAGTAGAACTTCAACTCATGTGGATGTGTTTATGTAATTGTTTTGTTTTGTTTGTTTGTCACTCCAGGCATTTCAGCTGGGTCCGACAGAAGCCTCA[C/T]AATATTGGGTCTACTGGGTGCCTGCACAGTTTGTTGATGCAATCAAAGACACAGTTCTGGGAAAATGGCAGTATTTTTAACGTGCCTCTATAGACACTGAAGAATTGGGATTCAGAGAAGAGATTGAGAAATATTAACTGGAGCCAACACCGTAATCTGAAGAACTGATTTTTTTTTCTGAAGTATATCCAGAGCAAACCGAAGGATTGCTGTTGGACTAAATATTTTGGGGGGGGGTTTTAAGTGCACTAAGTGTCAGCATCCCGTTTTTCAAACTATTTGACCACTCGTTTTTTTAAAAGCAATCCCAAGCATAAACAGAAAAATTGTACAGAACTTGCATATACATTTCTCGTAGTTATTCTGAAAGAAATAAAAATTATTTAAGGAAAACGACTGACGCAGTAGAACGATTTTATCGAAAATATTCCTCGGTTTACTATTCAACTCAAGCAAACTTGCCAAAGTCGACAGTTCACACACCATTGATTTCTTTGCTC
Associated Phenotype:
Not determined