ZMP
PTPRD (2 of 2)
Ensembl ID:
Description:
protein tyrosine phosphatase, receptor type, D [Source:HGNC Symbol;Acc:9668]
Human Orthologue:
PTPRD
Human Description:
protein tyrosine phosphatase, receptor type, D [Source:HGNC Symbol;Acc:9668]
Mouse Orthologue:
Ptprd
Mouse Description:
protein tyrosine phosphatase, receptor type, D Gene [Source:MGI Symbol;Acc:MGI:97812]
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa34262 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa34263 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa45306 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa6089 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa2384 | Nonsense | F2 line generated | Not yet available |
| sa34264 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa34262
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000082630 | Essential Splice Site | 191 | 1033 | 7 | 20 |
Genomic Location (Zv9):
Chromosome 7 (position 76969961)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN150000.1 | 19531 |
| GRCz11 | KN150000.1 | 19531 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTTGTTCCACATAATTGAAATCCACTAATTCCCTTTTTATTTTGCTCCA[G/A]CTTTACCGAAGCCACCAGGTGTTCCCCAGGTAACCGAACGCACGGCAACA
Long Flanking Sequence:
GTTTGCATGTTCTCCCTGCCTTCGTGTGAGTTTCCTCCAGGTGCTCCGGGTTTCCCCCACAGTCCAAACACATGCGGTACAGGTGAATTGGGTAGGCTAAATTGTCCGTAGTGGATGAGTGTGTGTGTGAATGTGTGTGTGGATGTTTCCCAGAGATGGGTTGCGGCTGGAAGGGCATCCGCTGCGTAAAAACTTCCTAAATAAGTTGGCGGTTCATTCCGCTGTGGTGACCCCAGATTAATAAAGGGACTAAGCCGACAAGAAAATGAATGAATGAATGAGTGAATGAACATTTGATTTGTACATTGTTATGTTTCTATACACACTTCAGGGCTTGAAGACCTTCGAAGACCTGCATCCCAGTGAATACTGACTACCTTTAGTAAATATAAAATAGAAACACACCATTCGGTCTCCAGTGATCACTAGCACTTAATCACAGTGGATTTTCCTTGTTCCACATAATTGAAATCCACTAATTCCCTTTTTATTTTGCTCCA[G/A]CTTTACCGAAGCCACCAGGTGTTCCCCAGGTAACCGAACGCACGGCAACAAGCATCACGCTCACATGGGATTCTGGAAATCCCGAACCTGTTTCGTACTACATCATCCAGCACAAGCCCAAAAACTCTGAGGACTCTTTTAAAGAGATTGATGGAGTTGCTACCACTCGATACAGCGTGGGCGGGCTGAGTCCTTACTCTGACTACCAATTTAGAGTAGTCGCCGTAAATAACATTGGACGCGGGCCTCCCAGCGAAGACATTGAGGCCAAAACTGCGGAGCAAGCGCCAAGTACCGCCCCACGACAAGTCCGAGGGCGCATGCTAAGTGCCACTACTGCTATCATACACTGGGACGAACCCGAGGAGGCCAACGGCCAGATTACAGGCTACAGGGTTTACTACACCACCGATCCCAGCCAGCACGTCAACCAATGGGAGAAACAGATTGTAAGGACCTCCAATTTTCTCACCATTCCCGGTCTGACGCCCAATAAGACT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34263
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000082630 | Nonsense | 248 | 1033 | 7 | 20 |
Genomic Location (Zv9):
Chromosome 7 (position 76970134)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN150000.1 | 19704 |
| GRCz11 | KN150000.1 | 19704 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AACTCTGAGGACTCTTTTAAAGAGATTGATGGAGTTGCTACCACTCGATA[C/A]AGCGTGGGCGGGCTGAGTCCTTACTCTGACTACCAATTTAGAGTAGTCGC
Long Flanking Sequence:
GGCATCCGCTGCGTAAAAACTTCCTAAATAAGTTGGCGGTTCATTCCGCTGTGGTGACCCCAGATTAATAAAGGGACTAAGCCGACAAGAAAATGAATGAATGAATGAGTGAATGAACATTTGATTTGTACATTGTTATGTTTCTATACACACTTCAGGGCTTGAAGACCTTCGAAGACCTGCATCCCAGTGAATACTGACTACCTTTAGTAAATATAAAATAGAAACACACCATTCGGTCTCCAGTGATCACTAGCACTTAATCACAGTGGATTTTCCTTGTTCCACATAATTGAAATCCACTAATTCCCTTTTTATTTTGCTCCAGCTTTACCGAAGCCACCAGGTGTTCCCCAGGTAACCGAACGCACGGCAACAAGCATCACGCTCACATGGGATTCTGGAAATCCCGAACCTGTTTCGTACTACATCATCCAGCACAAGCCCAAAAACTCTGAGGACTCTTTTAAAGAGATTGATGGAGTTGCTACCACTCGATA[C/A]AGCGTGGGCGGGCTGAGTCCTTACTCTGACTACCAATTTAGAGTAGTCGCCGTAAATAACATTGGACGCGGGCCTCCCAGCGAAGACATTGAGGCCAAAACTGCGGAGCAAGCGCCAAGTACCGCCCCACGACAAGTCCGAGGGCGCATGCTAAGTGCCACTACTGCTATCATACACTGGGACGAACCCGAGGAGGCCAACGGCCAGATTACAGGCTACAGGGTTTACTACACCACCGATCCCAGCCAGCACGTCAACCAATGGGAGAAACAGATTGTAAGGACCTCCAATTTTCTCACCATTCCCGGTCTGACGCCCAATAAGACTTACTACATCAAGGTCCTGGCCTTCACCTCTGTAGGGGACGGACCGCTCTCATCAGATCTGCAGATCATAGCCAAAACTGGAGGTGGGTTCGGGGAATCAGAGCATTTTTCAAAATAAAACATTTGGAGTGTTTGTCATTTATGCTCTTGTGATGTTTTGTAGTGCCCTCTCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa45306
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000082630 | Nonsense | 339 | 1033 | 7 | 20 |
Genomic Location (Zv9):
Chromosome 7 (position 76970405)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN150000.1 | 19975 |
| GRCz11 | KN150000.1 | 19975 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGGTTTACTACACCACCGATCCCAGCCAGCACGTCAACCAATGGGAGAAA[C/T]AGATTGTAAGGACCTCCAATTTTCTCACCATTCCCGGTCTGACGCCCAAT
Long Flanking Sequence:
GATTTTCCTTGTTCCACATAATTGAAATCCACTAATTCCCTTTTTATTTTGCTCCAGCTTTACCGAAGCCACCAGGTGTTCCCCAGGTAACCGAACGCACGGCAACAAGCATCACGCTCACATGGGATTCTGGAAATCCCGAACCTGTTTCGTACTACATCATCCAGCACAAGCCCAAAAACTCTGAGGACTCTTTTAAAGAGATTGATGGAGTTGCTACCACTCGATACAGCGTGGGCGGGCTGAGTCCTTACTCTGACTACCAATTTAGAGTAGTCGCCGTAAATAACATTGGACGCGGGCCTCCCAGCGAAGACATTGAGGCCAAAACTGCGGAGCAAGCGCCAAGTACCGCCCCACGACAAGTCCGAGGGCGCATGCTAAGTGCCACTACTGCTATCATACACTGGGACGAACCCGAGGAGGCCAACGGCCAGATTACAGGCTACAGGGTTTACTACACCACCGATCCCAGCCAGCACGTCAACCAATGGGAGAAA[C/T]AGATTGTAAGGACCTCCAATTTTCTCACCATTCCCGGTCTGACGCCCAATAAGACTTACTACATCAAGGTCCTGGCCTTCACCTCTGTAGGGGACGGACCGCTCTCATCAGATCTGCAGATCATAGCCAAAACTGGAGGTGGGTTCGGGGAATCAGAGCATTTTTCAAAATAAAACATTTGGAGTGTTTGTCATTTATGCTCTTGTGATGTTTTGTAGTGCCCTCTCAACCAACCGATTTCAAGGGTGAAGCCAAATCCGAGACAAGCATTTTGCTATCGTGGAACCCCCCAACTCAGACAGGCCAGGACAATCAGATCATCGGATATGAGCTTCTCTATAAGAAAGGAGATGACAAAGAGGAGGTATGAACGCCGTCAGTCTTCAAGAGCTGTCTGAACTGAGTCTGTATTTTGGTTTTTAACTTTCATTTTGTTTTGTTTTTTTCTAGAAACGTGTTAGCTTTGAGCCCACCACGACCTATTTACTCAAAGAGCTGAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6089
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000082630 | Nonsense | 603 | 1033 | 12 | 20 |
Genomic Location (Zv9):
Chromosome 7 (position 76984841)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN150000.1 | 34411 |
| GRCz11 | KN150000.1 | 34411 |
KASP Assay ID:
554-3676.1 (used for ordering genotyping assays)
KASP Sequence:
ATGRATGTCAGCCGCTCACACACTCTCTGCTCTCTACCTAGGGCTTACTA[C/A]ATAGTGGTGGTRCCACTGAAGAAACAGCGGCCGGGGAAGTTCATCAAACT
Long Flanking Sequence:
GTCAGGAAAGGGTTTCCTCCAGAAGCATCACATAGTGACCTGAACACTATTCTGACGAAGAGCGGCTCAGAGACTGCTGTACAGGCTCATGTCTGTCCTTCCCAACATTATCTGTTGCTGTATTGGCTGCAAATAGAGGGCCTACACCATACTAATGAATCATTGGTCTAAAACTAGGCACTGTTTCATTGTTCAACCCCTGTATATTGCGTATCTCTATTTTTAATGTATTAATTATACATTGTACTGCTCTTAAATCCAATATATGTCTGTAATAGTGGTCTTGAAAGGTCTTAAATGTGCCTTGAGGAGGCCGGTGCAGAAAGCCGGAGTGAAGCGAGCAGGTTATTGATGTGTTTACTGAAGGTTTCTCTCTTTCCTCAAACACCTCGTTAATCCACTGTCATCCCGACTGGATTGGAAAGTCCAGATTGATTGGAGCTAATCTTGATGGATGTCAGCCGCTCACACACTCTCTGCTCTCTACCTAGGGCTTACTA[C/A]ATAGTGGTGGTGCCACTGAAGAAACAGCGGCCGGGGAAGTTCATCAAACTGTGGGAGAATCCGGACGAGATGAATCTGGAAGAGGTGAGAGACTTTATCTTATTTTTTAAAATGTATGAGATTTCATGGCGCCAGAAAGCAGACTTTTTATTCTGTTGTCATGGCAACCATATACAATGCACATTACAGGGTGTGCCAGTCTAATGCCTCATCCACACTAGCAGTGACTTTGTAGCTGCCTGTCACTAAGGTGGCGACCTCAAGTGAGCTCTACTGGTGCTCCTATTGGCTGTCGCTCGAGAAAGTCGCTCATAAAGTTGAAGGACTCTTAACTTTGTCATGTAGCACGACATGCCTAATTGGTCGCCAACAGTTGCTGATGCTCGCATAGAGGAAAGTCGTCGCAAGTCGCTCACTCTCAAAATTAACGCTCGGTTGCCGCTTTGAAGCTGCGAGTTGCTTGTAGTGTGAATGAAGCTTGATCTCATGAGGAAACGTCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2384
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000082630 | Nonsense | 721 | 1033 | 14 | 20 |
Genomic Location (Zv9):
Chromosome 7 (position 76990604)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN150000.1 | 40174 |
| GRCz11 | KN150000.1 | 40174 |
KASP Assay ID:
554-3374.1 (used for ordering genotyping assays)
KASP Sequence:
ACGCTGCCAGCCCGTACTCAGACCCAGTGGTGTTCGCAGACATCGACCCG[C/T]AGCCCATCATTGATGAAGAGGAGGGTCTGATCTGGGTTGTTGGACCGGTT
Long Flanking Sequence:
TCAGTGAATCAGAGAGGGTTTCTTGATGTCAGAGTGAATCAGTTAGTGTATTTCAGGTCAGAACAAATCATTGGGGGAATCATTGAGTTTGTTTATTGTCAGAGTGAATCAGATAGTTTAGACTGAATCTGTGAATTTGTTTGGTTCGTGTCAGAGTGAATCAGTGAATGTGTTTTATACCCGAATGAATCAGTGAGTGAATCAGTGATTGTGTTAAATGCCAGAGGGAATCAGTGGGTGTATTTTAGGCCAGAGTGAATTACTGAGTTTGTTTGAGATGAGACTGAATATGTAAATGAATCAGTGAGTGTGCTTTATGTCAGAGTGAATCAGCGAGTGAATCAGTGAGTGAATTAGTGATTCTTGATGCAGCGTTTGACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCAGATGCTGTACGCTGCCAGCCCGTACTCAGACCCAGTGGTGTTCGCAGACATCGACCCG[C/T]AGCCCATCATTGATGAAGAGGAGGGTCTGATCTGGGTTGTTGGACCGGTTCTGGCCGTCATTTTCATCATCTGCATCGTTATCGCCATCCTGCTGTACAAGAGGTAGAAACCGTGGAGAAACACACACATAGACAATCCAGATGCTAATATAAACTTAAAGTAAACTGAATAAAGATTCAGCCAGATGCTTCAGACAGTCTCTAATATAAACATACAGTGGGGAATTATTAGCTGAGGTACTACTACTACTACTATTATTATTATTATTATTATTATTATTATTATTTATTATTTTTATATTATTATTATTATTATTATTATTATTTATTATTATTATTATTATTATTATTTTTATATTATTATTATTATTATTATTATTATTATTATTAATATTTTTTGTTGTTGTTGTTGTTGTTGTTGTTATTATTATTATTATTATTATGTCTATTTTATTGTTATTATTATTTATTATTATTTTTATAGTATTATTATTTATTAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34264
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000082630 | Nonsense | 909 | 1033 | 18 | 20 |
Genomic Location (Zv9):
Chromosome 7 (position 77018407)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN150000.1 | 67977 |
| GRCz11 | KN150000.1 | 67977 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGGAGCGCTGCCCGAGACCTTCGGAGACTTCTGGAGGATGATCTGGGAA[C/T]AGCGGAGTGCAAACATCGTCATGATGACCCGACTGGAGGAGCGGTCCAGG
Long Flanking Sequence:
TTAATATTTTATTATTTTATTGTTATATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTACTGTTATTTATATTTTATTGTTTTTATTTAATTATTATTATTATCATTATCATTATTTTTATTTTTATTTTTATTTTTATTATTATTATAATTATCATTATTTTTATTATTATTATTATTATTATTATTATTGTTATTATTACTATTATTATTATCATTATTTTTATTATTATTATTATTATTATTATTGTTATTATTACTATTATTATTATCATTCTTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAATATAATTTGACTGTATGTTTGGGTTTACTTGCAGGTATTCCCGGCAGCGATTACATCAACTCCAACTACATCGACGGCTACCGGAAGCAGAACGCCTACATCGCCACTCAAGGAGCGCTGCCCGAGACCTTCGGAGACTTCTGGAGGATGATCTGGGAA[C/T]AGCGGAGTGCAAACATCGTCATGATGACCCGACTGGAGGAGCGGTCCAGGGTACGAGCGGTGATATCACGGCTCATCGCACAATCTGTGTTTGTTTCAGGTGTTTGATAAAGGTGTGCATGTGTGTGTGTGTGCAGGTGAAGTGTGACCAGTATTGGCCCAACAGAGGAACAGAGACGTACGGCCTCATCCAGGTGACGCTGCTGGACACAGTGGAGCTCGCCACATACTGCGTCCGCACGTTTGCACTTTATAAGGTATGTTTGTGTGTTCAGATGTGTGTATATATATCATTCAGTTGTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGAGAGTGATTTAGCTGATTCAGTTTTATGTCTGTGTTTTGGTCTCCAGAATGGCTCCAGTGAGAAGCGTGAGGTCCGTCAGTTCCAGTTCACGGCGTGGCCGGATCACGGCGTCCCGGAGCACCCGACTCCATTCCTGGCCTTCCTGCGCAGAGTCAAATCCTGTAACC
Associated Phenotype:
Not determined