Busch Lab

ZMP

hoxd4a

Ensembl ID:
ENSDARG00000059276
ZFIN ID:
ZDB-GENE-980526-214
Description:
Homeobox protein Hox-D4a [Source:UniProtKB/Swiss-Prot;Acc:O57374]
Human Orthologue:
HOXD4
Human Description:
homeobox D4 [Source:HGNC Symbol;Acc:5138]
Mouse Orthologue:
Hoxd4
Mouse Description:
homeobox D4 Gene [Source:MGI Symbol;Acc:MGI:96208]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa31696 Nonsense Available for shipment Available now
sa30912 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa31696
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082355 Nonsense 52 256 1 2
Genomic Location (Zv9):
Chromosome 9 (position 1941422)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1949826
GRCz11 9 1950623
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAAATTTCCTCCTTGCGAGGAATATTCTCAGAACAGCTATATACCTGAA[C/T]AGAGCCCAGGCTACTACAGTCCGTCGCAGGACACTGATTTCCAGCATCCC
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa27319
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082355 Nonsense 72 256 1 2
Genomic Location (Zv9):
Chromosome 9 (position 1941361)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1949765
GRCz11 9 1950562
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTACTACAGTCCGTCGCAGGACACTGATTTCCAGCATCCCGGAATCTATT[C/A]ACGGTCAAACTACTCTGAACAGCCTTACAGTTGTAGCACTGTCCAGGGCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30912
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082355 Nonsense 215 256 2 2
Genomic Location (Zv9):
Chromosome 9 (position 1940541)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 1948945
GRCz11 9 1949742
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGATCGCGCACACACTCTGTCTTTCTGAAAGACAGATTAAAATCTGGTTT[C/T]AGAACAGGAGAATGAAATGGAAAAAGGATCACAAACTACCAAACACGAAA
Associated Phenotype:
Not determined