Busch Lab

ZMP

irbp

Ensembl ID:
ENSDARG00000059163
ZFIN ID:
ZDB-GENE-990415-132
Description:
Interphotoreceptor retinoid-binding protein [Source:UniProtKB/TrEMBL;Acc:O57689]
Human Orthologue:
RBP3
Human Description:
retinol binding protein 3, interstitial [Source:HGNC Symbol;Acc:9921]
Mouse Orthologue:
Rbp3
Mouse Description:
retinol binding protein 3, interstitial Gene [Source:MGI Symbol;Acc:MGI:97878]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa41931 Nonsense Mutation detected in F1 DNA Not yet available
sa5849 Nonsense Mutation detected in F1 DNA Not yet available
sa11103 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa41931
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082200 Nonsense 659 1202 1 5
ENSDART00000082203 None None 627 None 5
ENSDART00000147532 None None 631 None 4
Genomic Location (Zv9):
Chromosome 12 (position 3240971)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 2627971
GRCz11 12 2662704
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAACCGAGGGACTGTACCGCTCTGTTGTCGACTATGAATCTCTTGCATCT[C/T]AGCTCACTTCAGATCTCCAAGAGACCTCGGGTGATCAGAGACTGCATATT
Long Flanking Sequence:
ACACGACCTTCGATTTTCACACCCTCAATAACATCAGTGGACCATCCTATGGCTCCACAAAGGGTGTTTATGTTTTAACAAGCTATTACACAGCAGAAGCAGGAGAGGAGTTTGCTTACCTAATGCAGTCCTTGCACAGAGGAACCGTTATTGGGGAAATCACCTCAGGAATGCTCCTACACTCCAAGACTTTTCAGATTGAACAAACAAGCCTTGCCATCACAGTCCCAATCATAAATTTCATTGATGTAAATGGGGAGTGCTGGCTTGGAGGCGGCGTCGTTCCTGATGCCATCGTGCTCGCTGAAGAAGCACTCGAGCGAGCTCATGAAATCATTGCCTTTCACAAGAATATTCAGGGATTGGTGCAAGAAGCTGGAGATCTCTTGGAAAAACATTACAGTGTGCCTGAGGTTGCAGCTAAAGTGAGTAGACTGTTGCAGTCTAAACTAACCGAGGGACTGTACCGCTCTGTTGTCGACTATGAATCTCTTGCATCT[C/T]AGCTCACTTCAGATCTCCAAGAGACCTCGGGTGATCAGAGACTGCATATTTTTTACTGTGAAACTGAGCCGGAAACTCTTCATGATACTCCTAAAATCCCTTCCCCTGAAGAGGCAGGGTTCATCGTTGAGGCCTTGTTCAAAGTAGATGTGATGTCTGGAAATATTGGCTATTTGAGATTCGACATGATGGAAGACATAAAGGTTCTGCAAGCAATTAATCCCGAGTTCCTCAAAGTCGTATGGAACAAGCTGGTGAACACAGACATGCTCATAATTGACGTGAGATATAACACCGGCGGATACTCTACAGCTATTCCTCTACTTTGCACCTATTTTTTTGATGCACAACCGCTGACACACATTTACACCCTTTTTGACCGCTCCACAGCAACTGTGACCAAAGTTACGACTCTTCCAGATGTGCTTGGACAGAAGTACAGCTCTCAGAAAGATGTTTATATTTTGACAAGTCACATAACTGGATCAGCCGCTGAGGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa5849
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082200 Nonsense 884 1202 1 5
ENSDART00000082203 None None 627 None 5
ENSDART00000147532 None None 631 None 4
Genomic Location (Zv9):
Chromosome 12 (position 3241646)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 2628646
GRCz11 12 2663379
KASP Assay ID:
554-3801.1 (used for ordering genotyping assays)
KASP Sequence:
AGGCAGTTCTGAATGCAGTTACTGGAAAACCATGGAGCATTTCAGGAGTT[G/T]AACCACATATAGTAGCTCAAGCAAGTGATGCACTTATTGTTGCACAGAAA
Long Flanking Sequence:
TGAGATTCGACATGATGGAAGACATAAAGGTTCTGCAAGCAATTAATCCCGAGTTCCTCAAAGTCGTATGGAACAAGCTGGTGAACACAGACATGCTCATAATTGACGTGAGATATAACACCGGCGGATACTCTACAGCTATTCCTCTACTTTGCACCTATTTTTTTGATGCACAACCGCTGACACACATTTACACCCTTTTTGACCGCTCCACAGCAACTGTGACCAAAGTTACGACTCTTCCAGATGTGCTTGGACAGAAGTACAGCTCTCAGAAAGATGTTTATATTTTGACAAGTCACATAACTGGATCAGCCGCTGAGGCATTTACTAGAACAATGAAAGACCTGAAAAGGGCCACTGTAATCGGAGAGCCCACAATTGGAGGTGCTCTCTCGAGTGGAACTTACCAAATCGGGAATAGCATCCTTTATGCTTCGATTCCCAATCAGGCAGTTCTGAATGCAGTTACTGGAAAACCATGGAGCATTTCAGGAGTT[G/T]AACCACATATAGTAGCTCAAGCAAGTGATGCACTTATTGTTGCACAGAAAATCATAGCCACTAAACAACAAAAGAAAAACTCAGGAAAATAGAGCAGAGTGGACTCCTTATTTGTGATTTTAACAGCTATAACCAAAATTCCATACGCTATAACCAAAATTTCTGCTGTGGTCACTTAAAAAAACAAAAAAAAAAAAACGAAAGGTTATTTTATAAACATTTTATTTTCCTCTACATCATAAACCATATCTGTCAACATTTGTCCCTGAAAATCTGGGAGACCGGGGGGTTAGGTTCGGGGGTGAGGTGTCTGAATAAAACTGTTGAGAACCGGGTACTGTGTACTGTGTTGTTAGTAACTGTACCAACCCAGGCTCATTCTGAAAACGTAGTCCCGCGGATGTTTCCGGAAACATGTCCCGTTAGGTACGTATTTTTGCAGTTTTTGTTTTCGTGAATCTGCGAGAGGCCGTTGTGTGTGCTTTTTCGCATCTAAAATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11103
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000082200 Nonsense 1101 1202 5 5
ENSDART00000082203 Nonsense 514 627 4 5
ENSDART00000147532 Nonsense 530 631 4 4
Genomic Location (Zv9):
Chromosome 12 (position 3247655)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 2634655
GRCz11 12 2669388
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAAACTGATGCATTAAATTCCACTTTTCYCTAGGCAGRAGATATGGMAGC[A/T]AGAAAAGTGTGGTAATCCTCACCAGTGGTGTGACCGCCGGTGCCGCTGAA
Long Flanking Sequence:
GTAAATATTGATGCATTTTGTTATAGATTGATTCATTAAAATATACTCTTTCCACATAGGAGATACAGCAATATATATGTTTATCCAATTCGAATGTTGACTATAATAATGTCATAATCCAATTTTGGGTTGATTTTTTTTCCCCAAGTAGATTTCAATAAACTTTCTCAATAGGTGAGTTTGTTCATATTTGACCCAGCACTGGATTATGACAACCCAGCCTAATTATATTACAGAATTATACATTAAATTCTACGTCATCTAGGCAGGAGATATGGCTATATATACTGTGAGTTTATCCTCTTCAAATGTTGACTATAATAACATCATAAACCAATGTTGGGTAGATCTTTTCCCCAAGTAGTTTTCGATTACACTTTTAACCCAATAGTTGGTTTTGTATATATTTGACCCAACATTGCATATTTTTGTAGATATATTTCATATTACAAAACTGATGCATTAAATTCCACTTTTCTCTAGGCAGGAGATATGGCAGC[A/T]AGAAAAGTGTGGTAATCCTCACCAGTGGTGTGACCGCCGGTGCCGCTGAAGAGTTTGTTTTCATCATGAAGAGGTTGGGACGTGCAATGATAATTGGCGAGACGACCCATGGAGGCTGTCAACCTCCGGAAACCTTCGCTGTGGGCGAAAGCGACATCTTCCTTTCTATTCCAATCAGCCATTCAGACACTGCTCAGGGTCCATCTTGGGAGGGTGCTGGCATTGCTCCTCATATCCCAGTGCCCGCTGGTGCCGCCCTCGACACAGCAAAGGGCATGCTCAACAAGCATTTTTCCGGCCAAAAATAAGTTGTTCATCTGGGCCTGGAACGGAAGCCAAATGATATAGTGAATTTAGATTGATGGCATATCATGAAGAGGCTGTTATAATGTGTGTAGACCAATAAGGTGATGTTTAGAAGACACAGTCAAGCCTTCAGTTCTATTTCTCCATTATTTCTTAAGTGTTCAATCTAAAGTCTGCAATCTCTGAGAAACAGT
Associated Phenotype:
Not determined