Busch Lab

ZMP

LOC100006625

Ensembl ID:
ENSDARG00000058994
Human Orthologue:
STX1A
Human Description:
syntaxin 1A (brain) [Source:HGNC Symbol;Acc:11433]
Mouse Orthologue:
Stx1a
Mouse Description:
syntaxin 1A (brain) Gene [Source:MGI Symbol;Acc:MGI:109355]

Alleles

There is 1 allele of this gene:

Allele Name Consequence Status Availability
sa35786 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa35786
Status:
Mutation detected in F1 DNA
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Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081947 Essential Splice Site 97 293 4 11
Genomic Location (Zv9):
Chromosome 15 (position 1738954)
Other Location(s):
Assembly Chromosome Position
GRCz10 15 1778839
GRCz11 15 1743748
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATGAACGATATCAAGACGTTGGCTAATAAAGTGCGCTCCAGGTTACAGC[G/T]TGAGTTTGTCATCTTTAATAGCACACAAGCTTAAACTGGATCAAGCTATG
Long Flanking Sequence:
ATTCATGTTTTCATCCACTTTGGTGTTTTAAGCTTGCTATCTTCGTCTTTCTCAGGTTGAAGAGATTCGGGAGTTCATCGACTCTTTGGCAGAGAAAGTAGGAGAAGTGAAGAGAAACCATAGCGCCACACTGGCCTCCCCAAACCCAGATGAGAGTATGTCTTTCAGCAGCATCCTTTATAGATTCACAATGTTTGTCAATCAGCTTTTACAGTCTGATGATGACACTAAAATCCAGTTCTCTGACCCCACCGATTGAGATTATATTTTTGGTGATTTACATTTATAATCTTGTTCCCAACCACACACCAAAAAGACTGTTGTCACGATGCATCATCATTTATGCTACTTTAAGTACAGCGTTGGACATTTTTATTGTGCATATGCAAACATATTCTGCATCTTTCTTTCTTTTTTTTGAACAGAAACAAAAACAGAGTTTGAGGAACTGATGAACGATATCAAGACGTTGGCTAATAAAGTGCGCTCCAGGTTACAGC[G/T]TGAGTTTGTCATCTTTAATAGCACACAAGCTTAAACTGGATCAAGCTATGTTATATAATAACACATTAGAAAACTGATTACCTCTTAAAATAATAAATTACTGAGATTCATATAACAGAGCCAAAACACCAGTGATGTTAAACAGTAGCCTAGAGCGCCATCTGCTGTTAAACACTAACCTAGAGCACCGTCAGCTGTTAAACACTAGCCTAGAGCACCGTCTGCTGTTAAACACTAGCCTAGAGCGCCGTCTGCTGTTAAACACTAGTCTAGAGCACTGTCTGCTGTTAAACACTAGCCTAGAGCGCCGTCTGCTGTTAAACACTAGTCTAGAGCACCGTCGGCTGTTAAACACTAGCCTAGAGCACCGTCTGCTGTTAAACACTAGCCTAGAGCACCGTCTGCTGTTAAACACTAGTCTAGAGCACCGTCGGCTGTTAAACACTAGCCTAGAGCACCGTCTGCTGTTAAACACTAGCCTAGAGCACCGTCTGCTGTTA
Associated Phenotype:
Not determined