ZMP

ENSDARG00000058941

Ensembl ID:

Human Orthologues:

PCDHGC4, PCDHGC5

Human Descriptions:

protocadherin gamma subfamily C, 4 [Source:HGNC Symbol;Acc:8717]
protocadherin gamma subfamily C, 5 [Source:HGNC Symbol;Acc:8718]

Mouse Orthologue:

Pcdhga11

Mouse Description:

protocadherin gamma subfamily A, 11 Gene [Source:MGI Symbol;Acc:MGI:1935228]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa12288	Nonsense	Available for shipment	Available now
sa31970	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa12288

Status:

Available for shipment
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Availability:

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Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000081912	Nonsense	278	888	1	3

Genomic Location (Zv9):

Chromosome 14 (position 3026407)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	2007652
GRCz11	14	1926003

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GATGTGGACTCTGGYGTAAACGGGAAGATATCCTACTCATTCAGTAAGTA[C/A]ACTCCAGAGAGAAWACTGAAGATGTTCAGCGTCGATTCTAAAKCGGGGGA

Long Flanking Sequence:

AGAGTTCTTATTCAGATTGATGATGTGAACGACAACGCGCCGCAGTTCCCAAACGCGAATTCATCACTTGAGATATCCGAGGCGGCCGCTCCGGGAACGCGGTTCCGCTTGGAGAGCGCGCGCGATCCCGATGTGGGCATTAACTCGCTGCGCACGTACAGCCTCTCCGCGAGCGACTACTTTGTTTTACACGTGGAGACCAAAAGCGACGGCAGCAAATTTCCAGAGCTGACTCTGGAGAAGGCTTTGGATCGCGAGACGATTTCCGCGTTTCAACTCCTGCTCACGGCTGTGGACGGAGGACAGCCGGAGAAATCCGGGACCACCCTTCTGCTCATTAAGATCCTGGACGTGAATGACAACGCGCCTGTGTTTGATGAGCCGGTCAAAAGGGTTAGCCTTTTGGAGAACTCTCCTCCGGGGACACTCGTGACCAAACTAAACACCACCGATGTGGACTCTGGTGTAAACGGGAAGATATCCTACTCATTCAGTAAGTA[C/A]ACTCCAGAGAGAATACTGAAGATGTTCAGCGTCGATTCTAAATCGGGGGAAATCCGTGTTGTGGGGGATGTGGACTATGAGGAAGCAAATGTGTATGACATCACTGTTCAGGCCAGGGATGGAGGCTCTCCCGCCATGGAGGGCTCATGCAACATCAAAGTGGAAATAATCGATGTGAACGATAACACTCCGGAGGTGACATTAACCTCTCTGACCAGCCCCATCCGGGAGGATGCTGACAGCGGGACTGTTATAGCACTGATCAGTGCGAAGGACTTAGATTCAGGGGATAACGGGAAAGTGACACTTAAAGTGTCCCAAGGACTTCCGTTTAAGCTCAAGTCAGCTTTTGGAGAACACTACACGCTTGTGACGGACGGACGTCTGGACAGAGAAGCCATTGATGAGTACACTGTTGTTGTCACGGCGACTGACTCCGGCTCGCCTCAGCTGTCCTCTGAGAAGCGCTTTGCGGTGCGTCTGTCAGACGTTAACGATAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa31970

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000081912	Nonsense	668	888	1	3

Genomic Location (Zv9):

Chromosome 14 (position 3027575)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	2006484
GRCz11	14	1924835

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GCGATCCAGCTTTGTCCACTAGTGTTATGGTCACAGTTACCATCGAGGAG[A/T]AAACCCCAGACAAATCGACAGACTTTCGCATGACTCCTCGCAAAGCGACT

Long Flanking Sequence:

ACGTCTACATCAACCCAGAGAACGGAAACATCTTCACCATGCGCTCTCTGGATTATGAGCAGATGAATGCGTTCAGGATCGAAGTGCAGGTGCGTGATGCTGGCGTGCCGCCGCAGGCATCCAATGTCACCGTGCACGTTTTTGTAGTTGACAAGAACGATAACCCACCGGTTATCCTGTACCCGGCGCACTCTGAAGAGACGGGGCTCCAGCTGACAGTCCCGCATGGAGTTCCAGTGGGCCATCGTGTCAATAAAATAGTCGCGGTTGATTCGGACAGCGGCCACAATGCTTGGCTCTTCTACACCATTGCTCCCGGAGACGATTCGTCACTGTTTCACATTGAACTGCACACTGGCGAGCTGCGGACTGCACAGAAACTCATGGACGACGAACAGGGTGGTAAAACCCACCCAGCATACAACTTCGTTGTGAATGTGCGAGACAATGGCGATCCAGCTTTGTCCACTAGTGTTATGGTCACAGTTACCATCGAGGAG[A/T]AAACCCCAGACAAATCGACAGACTTTCGCATGACTCCTCGCAAAGCGACTGGAATGACTGACGTCACACTATACCTCATAATCTCGCTGGGTTGTGTGACTTTGGTGTCGCTGTTAACAATGGCGATACTCTTGGTACGGTGCATCAGGCACAAGGGCGGATCTACATGCTGCTACTCCAGATCGGGATTGCGTTCTCGCCATGCTTACCAGCAGAGAGCAAACAAAGACCTTCACCTCCAGCTGAACACTGACGGACCCATCAGGTACATGGAGGTGGTCGGAGGCCCTCAGGAGCCTCACACCAGGACGTACAGGCCCTGCTACTCGACGCTCTCCAGCAGGAGCGACTTTGTGTTCGTCAAGACTCCCATTTTGAGTCACAACAACACGCTTAACATGACTTTAACTAGGAAGCACTTAATGAACTCAACCAATGAGGTGAGAGCACGCTCATCCCCACAGCCAATCAAATGCTTTGCTGCCACTAATGGATTTTCT

Associated Phenotype:

Not determined