Busch Lab

ZMP

si:ch211-274f20.2

Ensembl ID:
ENSDARG00000058579
ZFIN ID:
ZDB-GENE-091204-91
Human Orthologues:
CANX, CLGN
Human Descriptions:
calmegin [Source:HGNC Symbol;Acc:2060]
calnexin [Source:HGNC Symbol;Acc:1473]
Mouse Orthologues:
Canx, Clgn
Mouse Descriptions:
calmegin Gene [Source:MGI Symbol;Acc:MGI:107472]
calnexin Gene [Source:MGI Symbol;Acc:MGI:88261]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa28263 Nonsense Mutation detected in F1 DNA Not yet available
sa7400 Missense Mutation detected in F1 DNA Not yet available
sa45507 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa28263
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081458 Nonsense 218 469 6 14
ENSDART00000133904 Nonsense 242 452 7 13
Genomic Location (Zv9):
Chromosome 14 (position 9106265)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 8710747
GRCz11 14 9016761
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCAGTCTTTTGGAAGATATGGACACACCAGTGGCGTCTTCTGACCAAAAA[C/T]AAGAACATTTAACAAATGAAGCCTCTGATCTAAACTTGGAGCAACATATG
Long Flanking Sequence:
AATAGCAGATTATGTTGTTATTAGTAAACATTGTAACTACAGAAGAGTCAAGCTTTGAATAGAAACATTATTGAAACTTTTTTTTGATATCTTTAAATGATATGCTAATGATCTTATCCGATTCCCAGATTTATGCTAAGCTAAGCTAAAAGTGCTCTCATCAGACTCACAGATTGGTGGATTTACAGGTCAAATTGACCCATGTATCAACACTAGGGGAGCTGTAAAAGGAGCCTATTTCCATAAAAGGCGGAGGGATACTTTAATGATTTAGTATATACACAGTATATCTAACAAATACAGTCATCTGCATTTAAAGTTAGATTAAACAGCTCAATTTTTAATAAGAGATGTCATGTAAAGTGACATTTTGGTTGCAATTGTCCTTTATAGACTTATATCCTGACAACACATTTGAGATCCTCGTTGACCTGACGCTGATTAATAAGGGCAGTCTTTTGGAAGATATGGACACACCAGTGGCGTCTTCTGACCAAAAA[C/T]AAGAACATTTAACAAATGAAGCCTCTGATCTAAACTTGGAGCAACATATGAGGTAAGCCATTTTATGTATATGAGGTAGGCCCATATGTACGATTTTTTCATTAAAATGTTCAAAAAACTCTAAAACGGAGGTATATATTTTGCTGCCTTATGCATTTACATTGTCCCAAATGTTTTGAGGAATGTTCAAATTCACAGTAATGAGACATTTTGACTTGTGAGACATACTGTGTTGTTTGTCACCATGCTAATTACACCATAAACACCAACGATGCTATAATACAGAGGTCACCAATCGTGGTCCTTGAGGGCCGGTGTCCCAGCAGGGTTTAGCTCCAACTTGCCTCAACACACCTGCCTGGATGTTTCAAGTATACCAAGTAAGACCTTGATTTGCTTGTTCAGGTGTGTTTGATTAGGGTTGGAGCTAAAATCTGAAGGACACCGGCCCTCCAGGAACAAGTTTGGTGACGACTGCTTTTATATGTTGAATTTTATTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7400
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081458 Missense 291 469 10 14
ENSDART00000133904 None None 452 None 13
Genomic Location (Zv9):
Chromosome 14 (position 9108983)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 8713465
GRCz11 14 9019479
KASP Assay ID:
554-4265.1 (used for ordering genotyping assays)
KASP Sequence:
GTGGAAAAACTCAATTAGAGAAAAAGATRTTTTWAAAAAWCTGATAAACC[C/A]TGAAGACAGACCCTGTAATGCTGCAATKTAAGTCAGTTCTATATGCTTTT
Long Flanking Sequence:
TCAGTCAGTTGGCGTTTCTGTGTGGAGTTTGCATTTTCTCTCCATGTTCGCGTGGGTTTCCTCCGGGTGCTCCTGTTTCCCCCACAAGTACAAACACATGCGCTATGGGTGAATTGGGTTAGCTAAATTATCCGTAGTGTATGTGTGTGAATGGGTGTGTATGGATTTTTCTCAGTGATGGGTTGCGGTTGAAAAGGCATCTGCTGCGTAAAACATGTGCTGGATAAGTTGGTGGTTCATTCCGCTGTGAAGACCCCAGATTAATAAATGGACTAAGCCGAAAAGAAAATGAATGAATGAATGAATATTCTTATCTCTTAACACACACAAAACAAACTTTAGCAGAGGTCTAGTGTCCAAATGTAATTCGGGTTGAATGTTGATTTAGAGGCTCTACCTGTACAAGACACACATGCCTTAATCAATGTAGTACTTTAAAAGCACAACATTGTGGAAAAACTCAATTAGAGAAAAAGATGTTTTTAAAAATCTGATAAACC[C/A]TGAAGACAGACCCTGTAATGCTGCAATGTAAGTCAGTTCTATATGCTTTTGTTGAAATCATTAGAAAAACTTCATTACCCATGAGGCTGCACATAAATTTCCACCAATCAGAGAGTTGTATTGAGAAAATTGTGCCAAAATAGCTCCACCATCTTTCATAAAGCACTACAAATTTAACTCAAAAGTAGGTGAGTTTGTATTATGTGCACATAGCTGAAACAGACTGATAGTACCTTGGTCAGGAGGGAGATTTATATAAGATAACGTAAAAAATGTTAAATTTATGATTGATTATTAATTCATTGTCAGATAGTCATCATCTGTGTTTTTTATTTTTGGAACATTTGGTTTGTCCATTATTAGCCACTAGACCCCCCAAAACATGCAAAACAATTAGCAATATGCCTTTATTAATGTTTATGGGTATTTGTTTTCATCTTTGGACAGGTCAGATGGTGTGGACAGACAAAGAAACGATTGCACTGAAGCTTCAGTTTGTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45507
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000081458 Essential Splice Site 402 469 12 14
ENSDART00000133904 None None 452 None 13
Genomic Location (Zv9):
Chromosome 14 (position 9111284)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 8715766
GRCz11 14 9021780
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACAGAAGACACATGGGGCCAGAGACAGACAGTAAGATGTTCAGCAGATG[T/C]TGTCCAGGCCAAATGATCTTTAAAATACGCCTGGCAAAATTTGGTATGAT
Long Flanking Sequence:
GTGATTGGCTGATTAGAAATTTGCGTTAACAAGCAGTTGTACCTAATAAAGTGTCCGGTTAGTGTATGTCATAGCATTACCTATAGTGAACTAATACACTGTAATAAAAGTTTTTAATATAGTAAACTGTGGTGTATTGCAGTATAATAAACTCAATAGTTGTATAAAATACAGTAATGGGAAATTTTTTTAAGTACTACTCAAGTACTTTATTATAGAATGGTTTTAAAACACTCTAGTATTTACTATAAATGACTATAATGTTTCTTTTCATCTCATTTGCAGTACATTATTATCTTTTGTGTTCATTTCTGTGTAGGACAACAAAGGAAAGCAGCAGTTCACAATGAGTCCCATTGCGGCTGTGGGTTTTGAGCTTTGGTCCCTTACTGGAGATGTGATGTTTGATAATATCTTGCTTTGTGATGATCTGGAAGTAGCCAGACGGTGGACAGAAGACACATGGGGCCAGAGACAGACAGTAAGATGTTCAGCAGATG[T/C]TGTCCAGGCCAAATGATCTTTAAAATACGCCTGGCAAAATTTGGTATGATGTCTAGAAAACACTAGAAAACAAAACTTTTGCCGTTTTGGAGACACATCGTCATTTGGCCATCACTATTTAGCTTTTGGCAAAGTCACACAAATGATTTCTTTCTCATTTCTTTTCCTGCTTCAAGCACAATAGATGTTCACCTACCCCCCAATGTGAATTCACTTTAGCTCTGTAAAGGGATAGTTCACCCAAAAAGTCATAATTTACTCAAACTCCGCTTGTTCCAAACCTGCTTGTGTTTCTTTCTTCGTTTGAACGCAAAGGAAGATACACTGAAGAATGTTCAGTAAAATTGACTTCCATACAGGCCTGGTTTGGCCAATCGGGAGGACCGGGAGAGTTCCCGGTGGGCCGGTCCGTGTTTTGGCCGCGAGGGCCGGTGTTTCTAGCTACTTGCATTCTCAGCAGTCGCACTTTTTTTTTTTTCATTAATTCATTCATTTTCTTG
Associated Phenotype:
Not determined