ZMP
shq1
Ensembl ID:
ZFIN ID:
Description:
Protein SHQ1 homolog [Source:UniProtKB/Swiss-Prot;Acc:A1L1R0]
Human Orthologue:
SHQ1
Human Description:
SHQ1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25543]
Mouse Orthologue:
Shq1
Mouse Description:
SHQ1 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1919421]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa11709 | Essential Splice Site | Available for shipment | Available now |
| sa26812 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa11709
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000035513 | Essential Splice Site | 48 | 586 | 2 | 12 |
Genomic Location (Zv9):
Chromosome 6 (position 44090468)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 44161632 |
| GRCz11 | 6 | 44159168 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACATCCAAGAGRAGGAATTTAAGTTCTATGCCAAGCCCTACTTTCTCAGG[T/C]GACTCTGCAAATGCGWTGATTGACATTTTGTTACAGSAAAAAGCATTTAC
Long Flanking Sequence:
GCAGATACTTAAATGTTTATATATAATTTGTATCATATACAAATATTTTTTATATCTAAATATAAATAAGCATTTTCTCAAATATATACATGCCTGTGTATTTACATAAAAATAATAAATATACACAGTACATACACTCAAACTATATCAAACTATTATTTTGGATGCGATTAGTTGCAATTAATTTTTGCACAGCACTAATTATGTTATATTATATTATAACTTGGCATAGGAAATAATTTGAAAATGTAATTAAAAAAAATTCTTTAGGATTACTTTTGTCCATTTTTGAATAATAATCACTAATTGTTTGTTTTTTTCTGTCTTGTTGTTGCAGTACTTCACAGTGTATAATCATGATAACGCCGGCATTTGAACTCAGTCAAGATGCAGATTTCCTCATTGTAGTTATTCGTGTACCCTACACCAGAACATCAGATTTCGACATCTACATCCAAGAGGAGGAATTTAAGTTCTATGCCAAGCCCTACTTTCTCAGG[T/C]GACTCTGCAAATGCGTTGATTGACATTTTGTTACAGGAAAAAGCATTTACAAAGATTTTTACTTGCTAGGACAGAGCCCTAAAAAAGCATTTAAACGGCTTATCCACAATTAAAATGAATAATAAACTCCTTTGAAAATTATTGCAGAAACTACTCAATTTGGAACATTCTGAGATTGGTCGTAAATACACTGGTTACCATTTAAAGTGAATCAAAGCCTTTCACTAGAGTCTACTAGAGAGAAGGATCATTGCATAGGATCATTTGTTTTTAGAAGCGGCTTGGTTTTATGTTTGTTCATGTAAAACAGGGACATTTATGAATTTGACTTTTAGTTTTAGAATGCAAATTGCAAATAAATGCATAAACATGTTGTAGTGCAAATGTTAATATATTGTTATTGTTAATACTTGCTCTGAAGGTTGACTCTGCCTGGGAGAATAGTTGAAGATGGACGGGAAAAAGCTTCATTCGATATCGATAAAGGTAACAATCACTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa26812
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000035513 | Essential Splice Site | 161 | 586 | 5 | 12 |
Genomic Location (Zv9):
Chromosome 6 (position 44081766)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 44152930 |
| GRCz11 | 6 | 44150466 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAAGTACGGCTTTGGAAATCTTAGGTCTGGAGTCTTCAGTAGACTGCAA[G/A]TAAGAACATTTGTCCTTGGTGATAAGGTCTTTTGAAAAAGTTTTTGATAA
Long Flanking Sequence:
TTTGGGTGAATTATCCCTTTTAATAGCAGAAATTAACAAGGACCTCTGATTACGAAGGAAGAATTACATGGGAGTACTTTGAAAATTGTTCTGTGTATGTTTCAGGTTTATTTACACTGCACGTCCCTAAAGAGACAGCCGGACAACACTTTGAGGGTTTGGAGATGCTCACCAGCCTCCTGGCTCCAAAAGGATCCAGATCTGCCAAACCGTTGGTGGAGGACTCAGGTTTAATTCTTCACATCATTACAAAATGCTGATCATCTTCCAGCACGTTCTCGTGGCATTTTAATTTCAAGTTTCTCTCGTTCTGTATTCTCTGAACGCTCCCTGCTGGCGTTCTCTCAGAGGCCTGTGGTGAAGGATGTGAGGAGGAAGACGAAGAGTTTGACTGGCAGATCGAACAGGAGGTTTACACTGAAGCCCCAGCGGACACACTGAAGGAATACCACAAGTACGGCTTTGGAAATCTTAGGTCTGGAGTCTTCAGTAGACTGCAA[G/A]TAAGAACATTTGTCCTTGGTGATAAGGTCTTTTGAAAAAGTTTTTGATAAATAGGCTAACGTTCATTTACATTGTGCTATTCAGGAGGAGCTGAATGAGGTGATTGACATGAAGGATCCAGACAACACCAACGCTGAACTCAGAAGACGCAATCGACTAGACACAGAGACTGCAGTATTTTGTGCTGACCATTACTTGTAAGTCAGCCTTCTCTATTTCTGTATCAAATGTCATTAAATCGGTCAGTGTTTTGAAATGACATAAAAAATGTAAAACATTATTTCACTGAACATTACAGTGATCTGAATAAACTAAACTGAACTGAACTTCAACAGTGATATTTTTACTAAATGTTACAAACCCCTGATGTTATTTTAGGGGAATGGGCTTTGACATTTAATGTACAATTAAAATAAATGTATGTACAGTTGAAGTCAAAATTATTAACCCCTCTGAATTATTAGCCCCTCTGTATATATATATATATATATATATATATA
Associated Phenotype:
Not determined