Busch Lab

ZMP

CSMD1

Ensembl ID:
ENSDARG00000058353
Description:
CUB and Sushi multiple domains 1 [Source:HGNC Symbol;Acc:14026]
Human Orthologue:
CSMD1
Human Description:
CUB and Sushi multiple domains 1 [Source:HGNC Symbol;Acc:14026]
Mouse Orthologue:
Csmd1
Mouse Description:
CUB and Sushi multiple domains 1 Gene [Source:MGI Symbol;Acc:MGI:2137383]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa30372 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa24754 Nonsense Available for shipment Available now
sa30371 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

This allele has been removed from public view.

Allele Name:
sa30373
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059170 Nonsense 29 875 1 17
ENSDART00000097148 None None 353 None 9
Genomic Location (Zv9):
Chromosome Zv9_scaffold3535 (position 231708)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 6641584
GRCz11 13 6770034
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATGGCCACATCAGTGGTGATGGATCGAGTTACAGGGACACTGTTGTTTA[T/A]CAGTGCAATTTAGGCTTTCGGCTCATTGGGACATCGGTTCGTATCTGCCA
Long Flanking Sequence:
CTGGGGCAGTACGTTTTTATGGAACAGAATTGTACCTAAAATAATAACTTCCACTGCCTGACAATCAGTGCTGCCCCTTAGACCAATCACCTGCTGCTTGAACAGCACGAAGGGCATTTTTCAAAATGTCAAACAGTAGCTGCTGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTCTCATTGGAACTAGTGCTTATGGCGATATGTTGCCTCATGCCTGTAAACCCATAGGTTGAATTTGTTTGTTTGTATGGTTTTTTTTAGTAACCTGATTTGCGTGGACACTGATTCTGTCATTTATAAATGTTTTTTTTTGTTGTTGTTGTTGTTATTTTTTGCAGCTGGTCATTGCGATTCTCCGGATCCAATTGTTAATGGCCACATCAGTGGTGATGGATCGAGTTACAGGGACACTGTTGTTTA[T/A]CAGTGCAATTTAGGCTTTCGGCTCATTGGGACATCGGTTCGTATCTGCCAACAAGACCACAGGTGGTCAGGGCAAGCACCTGTGTGTGTTCGTAAGTAACTTTAAACAATATGAGTTCAAACGTTAATTGCTTATTTTATAAAGTAAATGATCAAATCTATTAAAATTTGTCTACGATTACAGCGTACGAGTGGCCCTCGTTAAAATACTAAACACACTAATGCAGTATGTCTGTTATTTTCCGTTTTTTAGAAACTCTAAACACCGACCACATGTAAAGTAAAACCGCGTTAAGCTGCTCATGTGTTTGCCACAAAACAGGCGAAACAACCCTCGACCGCAGTTCATGTTCAGTCACAATATACTTTATTTACGCTTATGTACTCGACAACACGAGTTCAACGCATCACTTCCGATGTGTGGTACATTCCGCGTCACTTCTGGTGTGGGGTACATACCCTTTCCATTAAGAATCTGTCATTGGCTGTTTCTCAATATCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30372
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059170 Essential Splice Site 59 875 1 17
ENSDART00000097148 None None 353 None 9
Genomic Location (Zv9):
Chromosome Zv9_scaffold3535 (position 231616)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 6641676
GRCz11 13 6770126
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATCTGCCAACAAGACCACAGGTGGTCAGGGCAAGCACCTGTGTGTGTTC[G/A]TAAGTAACTTTAAACAATATGAGTTCAAACGTTAATTGCTTATTTTATAA
Long Flanking Sequence:
GCTGCTTGAACAGCACGAAGGGCATTTTTCAAAATGTCAAACAGTAGCTGCTGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTCTCATTGGAACTAGTGCTTATGGCGATATGTTGCCTCATGCCTGTAAACCCATAGGTTGAATTTGTTTGTTTGTATGGTTTTTTTTAGTAACCTGATTTGCGTGGACACTGATTCTGTCATTTATAAATGTTTTTTTTTGTTGTTGTTGTTGTTATTTTTTGCAGCTGGTCATTGCGATTCTCCGGATCCAATTGTTAATGGCCACATCAGTGGTGATGGATCGAGTTACAGGGACACTGTTGTTTATCAGTGCAATTTAGGCTTTCGGCTCATTGGGACATCGGTTCGTATCTGCCAACAAGACCACAGGTGGTCAGGGCAAGCACCTGTGTGTGTTC[G/A]TAAGTAACTTTAAACAATATGAGTTCAAACGTTAATTGCTTATTTTATAAAGTAAATGATCAAATCTATTAAAATTTGTCTACGATTACAGCGTACGAGTGGCCCTCGTTAAAATACTAAACACACTAATGCAGTATGTCTGTTATTTTCCGTTTTTTAGAAACTCTAAACACCGACCACATGTAAAGTAAAACCGCGTTAAGCTGCTCATGTGTTTGCCACAAAACAGGCGAAACAACCCTCGACCGCAGTTCATGTTCAGTCACAATATACTTTATTTACGCTTATGTACTCGACAACACGAGTTCAACGCATCACTTCCGATGTGTGGTACATTCCGCGTCACTTCTGGTGTGGGGTACATACCCTTTCCATTAAGAATCTGTCATTGGCTGTTTCTCAATATCAAGTACGCAACGTTCAGACTTGCGTATTTGAAAGTTTAGACTTGCCAAGTTCAGACTTGGAAGAACGAACTCCTGAGGACGCGAGGACACAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24754
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059170 Nonsense 128 875 3 17
ENSDART00000097148 None None 353 None 9
Genomic Location (Zv9):
Chromosome Zv9_scaffold3535 (position 225111)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 6648181
GRCz11 13 6776631
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGCTGTTTTTTATCTTGCAGTGGTAAACTGCTCTGATCCGGGCTTTGTA[G/T]AGAACGCCATTCGTCATTCTCAACAGCGCTACCCTGAGAGCTTCAACTAC
Long Flanking Sequence:
ATTTGCTACTTAATAGCCGACACAGCATGCCAAGAACCGCATGTTGTGTTCAGAAAATACAGAAAAATGTATTGTGACCACATCAGTCAAAAATCCATGAAGAAAAAAAAAAAACATGAGTAAAAGAATGTTCGCTGCAGTAACAGATATATCAACTTTGGATCAGAATCCACAAACAATGCGTTCCAGGTATGCACAGGACAACAGAATATTCTTGTCTGTTGTGGAAGTGCAGAGATAAAAGGCAAAGAAAGTTCTGACAGAGCACAACGCAGCCTTTTATAATCCATATCTTCAAAAAGAAAGTTCAGTTTTGCGCTTTGCAGTTGATTGAAATTGCTCCAGAGGCTGCACCAGTGATCCTACTGTTCAGCCTCCTCCATTGATTTTTTTTCCTCTCTCTGTCTTTCCTCACTCTTCCAGTGTCTTTCCTGTCAGACATTAAGCATCTGGCTGTTTTTTATCTTGCAGTGGTAAACTGCTCTGATCCGGGCTTTGTA[G/T]AGAACGCCATTCGTCATTCTCAACAGCGCTACCCTGAGAGCTTCAACTACAGAAACACCGTGATATATCACTGCAAGAGAGGCTTCTATCTGCTCGGCTCCTCTGTTCTCACCTGCCGGTCAAACGGATTCTGGGATAGATCACTTCCTAAGTGCCTTTGTGAGTGATGGCCTTGTGTTTATTACAATGCGTTCTTGCATATTGATACAGTGCCAGAAATGTGATCGGTCAGTCATTCAGTCAGTCAGTCAGCCAGTCAATCAGTAAAACAATCAGTCAATCAATTATTAAATCAGTCAATTAATCAATTAATTAATCAATCAATCAATTAGTTAAACAATAAGTCAATCAATCAACCAGATCAATCAGTCAAACAAACAAACAAACTAGCAATTAATAAGTCAGTCATCAGTCAGTCAACCAGTCAATTGATCAGTCAAACAATAAATGATTAAGTCAATCAATCAATAAGTCTGTCTATCAATCAATCAGTAAAGCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30371
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059170 Nonsense 388 875 7 17
ENSDART00000097148 None None 353 None 9
Genomic Location (Zv9):
Chromosome Zv9_scaffold3535 (position 206924)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 6666368
GRCz11 13 6794818
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTTACATCGGAAAAGAGTTCATATTCAACAAAACCGTCCACTATCGCTG[T/A]AACCCTGGTTATGAAATGGATCCCCTCGATTCATCTGTACTACGATGCAG
Long Flanking Sequence:
ACATCATTTAAAACCAATAAACCAATAAACATTTTAAGACGTCTAAACATAGACGAAAATTTGGATGGGCAGTGAAAATCTAATAAATATCTAAAAATACCCCAAAACTAGTCATCAAATACAAAGATTTGACAGATTCCACATGTATAGTCATTCATTCTTGTGTATTTGATCTAGACTAGTCTAGTCTAGTCTTGGGCTATTCTTAGATGTCTATTAGATCCCCAATTTTAGTCTTGATTTAGCCTAGCCGTTTTAGCCTGTTTAGATGCCTATTAGACTTCAGGTTTTACACAAACTAATATTTTTGGTTATTAAAACAAAATTAAATTAGACATTCAGTCAATTTAAGTGAATAAGAAATATCAGAATGTCAAGAATATCTGTGTTAGCTTGTTCTCTATTTTTGTAGTTATCAGCTGTGGAGATCCTGGTCCAATCGCCAATGGAATTTACATCGGAAAAGAGTTCATATTCAACAAAACCGTCCACTATCGCTG[T/A]AACCCTGGTTATGAAATGGATCCCCTCGATTCATCTGTACTACGATGCAGCAAAGATGGCACTTGGAATCAGACCAAACCAAGCTGCAAAGGTAAGTTTCACTTCCAAATCGTCAAGATATCTCCATTTTCTCTCTTGGCTGTTCGTCAAACAGCTTCGCGAGAGCTTTTAAAAAATACACTAATATTATGGGCTTCTTTGCATTCCAACATCAAAAGTCTTTCAGATGTTTTTTGATCTTTTACTTTATTTATTTATTTTTCTTTTACTCGCCTGGCATGTAAGATTATTCACTTGCGAACTCCAAGGAAATGTGTAGGATCTATGTTACAAGATGTCAGAATGAAATCAGTGAGTAGTGCAATGCTGACAGCTCAGCCTCCTCACGACCATTTTCTAGAAAAATTCATCTATATGTTTTTGGATGCAAGACGAAATGTCTGGATATTTGAAGGGATTTTTTTAGTGCAGAGTCCTATTTAATTATCATTTGCTCCCTT
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa30370
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059170 Essential Splice Site 534 875 9 17
ENSDART00000097148 None None 353 None 9
Genomic Location (Zv9):
Chromosome Zv9_scaffold3535 (position 195615)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 6677677
GRCz11 13 6806127
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTTTGTGAAGCAGACGCTTCCTGGAGTGGATTTCAGCCTTCTTGCATTG[G/A]TGAGCCACTATGCTCTTTGAAGAAAAAAAAAAATTGGCATTTCTGTGTGA
Long Flanking Sequence:
TTTATTTTCAAAAAAAAATTTGTTGGATCTATATTAGGTCATCTGTTTGTTGACTCTGACAGCTAAATAAGCTTAAAAATAAGCCTCAAACAAGTGAAACCCATAATGATATAAACAAAGGGGACTATTATAACAGTATGACTTCTGAAATGTGATTACCTGTGTGATTAAAAGACTTTCTGCTAGTGTTAGTTCTTTTTGACTGTTGCAATTTGTCATTTTCAAACACATTGCACATTTTAATACTAAATGATGTTCTAGAAAAGAAAGTAGCTAAACTGAGACACTGATAAAGTGAAGTCTTTTTTGATTTGTGTCTTTTACAGCCGTGCTATGTGGAGATCCAGGGACCCCTGCAGAGGGCTACATGGAGGGCCGGCAGTTCACCTATAAATCAGAAGTGACATTCCACTGCAGACCTCCTTACCTGCTGGTGGGCTCTTCTAGAAGACTTTGTGAAGCAGACGCTTCCTGGAGTGGATTTCAGCCTTCTTGCATTG[G/A]TGAGCCACTATGCTCTTTGAAGAAAAAAAAAAATTGGCATTTCTGTGTGAAGGTTGCATGTTCTCCCCGTGATTGCGTGGGTTTCCTCTGGGTGTTTCGGTTTCCTCCACAGTCCAAAGACATATTGTATAGGTGAATCGGGTAAGCTAAATTGTCCGGAGTGTAAAAGTGTGGATGAGAGTGTAAGGGTGTTTCCCAGTCATGGGTTGCAGCTGGAAAGGCATCTGCTGCATAAAACATATGATGAATAAGTTGGCGGTTCATTCCACTGTGGCGACCCCCGATCAATAAAGTGACTTAAGCCTAAAAAACGAAACAAAAAAATAAATGTATTTATATATATATACACACACACACACACACACACACATACCCAAACACACATTTATACAACAGTTCTGTCTGGTTCTTGAAATATGATATTCTTCACCCTTCTGTATTTCTCCACCCACATAGAGTGGCAGCAGATCAATAAACTCACTACAGTTTGACCAATATTG
Associated Phenotype:
Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:
sa30369
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000059170 Nonsense 625 875 12 17
ENSDART00000097148 Nonsense 82 353 3 9
Genomic Location (Zv9):
Chromosome Zv9_scaffold3535 (position 186412)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 6686880
GRCz11 13 6815330
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTAGACGTAAAGGCTATAGACTTGCCTACTCTAGGTTACACCCTCATGTA[T/A]ACATGCCAGGATGGCTTCTACTTAGCTGGAGGATCAGAACACAGAACCTG
Long Flanking Sequence:
GTCCTGCAGAGTTTAGCTCCAACTTGTTTCAACATTTGCCAGGAAGTTTCTAGTATGCTAGTTTGAGCTTTATTGGGTGGTTCAGGTGTGTCTAATTTGGATTGGAGCTCAAATTTGGAGGACACCAAACCTCCAGGACCAAGTGTGAGCAATCCTGGTCTAGAGGGAGTGATTTGTCTGCTTGGGAGACAAAAAAAAGGAGTAAATTGCTACAAAATTGTATTTTGGTCCAGTCTTCTGTTACAGCATGTGTTAAATGATCCATGTCATTGTACAATCAAACAAACAAACTAATAAAAAAGTACATACGTAAATTAAAAAACCCAAAACAAAACAGAAAAAAAATAAAATAAATAGGTTTACGTGATTTGCCTCGAAAGAACATAAAGTAATTTATTTTCTCTTTACTTTTCAGCACATGCATGTAGGCAGCCGGAGACACCATCTCATGTAGACGTAAAGGCTATAGACTTGCCTACTCTAGGTTACACCCTCATGTA[T/A]ACATGCCAGGATGGCTTCTACTTAGCTGGAGGATCAGAACACAGAACCTGCAAAGCAGATGGGAGATGGACAGGCAAACCTCCAGTCTGCAAAGGTACAGAAACTGCTGGATTGATGAGTAAATATAAATATATATATATATATATATGAAGACAAAACGTAACTGTTAAAAAAATATGTAGCTACTGTCAGCATTTACGAATTAATAGAGGCTATTTGTGTCTAACTGATGTATAAGTGAGTCATTCTGAGAGAAACTACAGCAAGAAACTTTGATTAACTGTTATTACCGCCATGCAGGTTGCATCCAGAAATGTCAAATGATCAATTATTTGCTCTATTTCCTAGTTGGACCGAAAATAAACAGCAAATCAAATGAGGATCCAGACGTGCAGAAAAACAAGATTCGTGGTATGAAACCTTTCAAGTTCCCCTTTCAATGATCCATTTTGATGTAATCAAAAAATAAACTCGGCCTTCATCAAAGGTAACCCAGGTCA
Associated Phenotype:
Not determined