ZMP
prpf18
Ensembl ID:
ZFIN ID:
Description:
Pre-mRNA-splicing factor 18 [Source:UniProtKB/Swiss-Prot;Acc:Q6GMH0]
Human Orthologue:
PRPF18
Human Description:
PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17351]
Mouse Orthologue:
Prpf18
Mouse Description:
PRP18 pre-mRNA processing factor 18 homolog (yeast) Gene [Source:MGI Symbol;Acc:MGI:1914479]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa36572 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa36572
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000081154 | Essential Splice Site | 121 | 342 | 4 | 10 |
Genomic Location (Zv9):
Chromosome 18 (position 7870114)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 18 | 8447492 |
| GRCz11 | 18 | 8405511 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTTCCAGAGACTCCGCAAGATTGAAATTCTGGCACCTGAAGTAAACAAG[G/A]TAAGACCCAGTCGCCATCTTGACACTGTTGGTGACCGGTGTGTTTTTGTT
Long Flanking Sequence:
TGGATTTTGTGCACACTGTCTAAGGTTAGATGAGGATTCAATCACATTTTATATATGCATGATTATAGGAACAATTCTATTTTCTGTTATTGATACGTTTATGATTTTGCAAGCAGCCCTTAATCTCGCAATTATGTTTTGCAATCATTAAAACATAGAAAATGGCTATAAATATATTCACATGTATTTTTATTTAAAGATGGACAAACCTGAGGAGGAGGCGCCTCAGTCTACATCAGCCAATCCGGTGTTAGAACTAGAGCTCACAGAGGAGAAGCTGCCAATGACACTCTCTCGACAGGAGGTTGGTCGGCCAATCAGAACTCACCTGATGTTATGTGGATGTTTTTTTTCTTGATGAATAATGAATGTTTGGCTGCGTGCAGGTGATCAGACGTCTGCGGGAACGTGGCGAGCCCATCCGTCTGTTTGGAGAATCCGATTATGATGCTTTCCAGAGACTCCGCAAGATTGAAATTCTGGCACCTGAAGTAAACAAG[G/A]TAAGACCCAGTCGCCATCTTGACACTGTTGGTGACCGGTGTGTTTTTGTTTAATGTGAAATTTCCCATGAAAGCAATAACAAATGAGAGTGATTCCAAAATTACTGTACTGTATGACAGACTCATACAAGCTAATTATGGGTTGCCTTCCTGTGTGTGTAGGGTTTGAGGAATGATCTAAAGGCTGCTATGGATAAGATTGATCAGCAGTATCTGAATGAGATTGTGGGTGGAGCGGAGGGTGCAGAACTGGACACACAACATGATCTTAAAGTACATGAGGAAAATACCACTATTGAGGAGCTGGAGGTAAATATGCAAACTGAATGCTTAATGGAAACTAATTCATATGTAACTCCCATATAAGCCCACTAGGTGGCTCTGTAGTCTTGCATCTGAATTGAATAGCGTTTTAAAGGGATAGTTCACCCAAAAATTAACATTTACTCACCGTCAAATGGTTTTAAGCCTCAGGTTTCTTGTTAAACATAAAAGATGTTT
Associated Phenotype:
Not determined