Busch Lab

ZMP

abca4a

Ensembl ID:
ENSDARG00000057169
ZFIN ID:
ZDB-GENE-050517-3
Description:
ATP-binding cassette, sub-family A (ABC1), member 4a [Source:RefSeq peptide;Acc:NP_001002206]
Human Orthologue:
ABCA4
Human Description:
ATP-binding cassette, sub-family A (ABC1), member 4 [Source:HGNC Symbol;Acc:34]
Mouse Orthologue:
Abca4
Mouse Description:
ATP-binding cassette, sub-family A (ABC1), member 4 Gene [Source:MGI Symbol;Acc:MGI:109424]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa11328 Essential Splice Site Available for shipment Available now
sa39458 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa11328
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000079770 Essential Splice Site None 280 1 8
ENSDART00000136772 None None 2277 None 48
ENSDART00000147063 Essential Splice Site None 300 1 7
Genomic Location (Zv9):
Chromosome 24 (position 29483657)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 28481973
GRCz11 24 28561132
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCCATGAGCTTCAGCAGAAGCAAGCACAAAAGAGCCTTCTTCTCCTGAG[G/A]TGAGTCTTGCCACTGTTACMATTTTTACGWGTGTCTTTTAGTYGTTTCCG
Long Flanking Sequence:
TTACTTCTATTGTTCAACAGACGAAAGAAACTCCAACAGGTTTGGAACAAGTGGAGGGAGAATAAATAATGACAGTGTTAATTTTTTGGCTTGAACTATCCATTAAAGTTTACATCGTGTAATTCTCACTCCCCCACCTCAGAATTGCAACTGACCTAACTATAAACTCGAAATTCAAGATACAGAAATAAAGTCAGAATTGCAGCGGGAAAAAACGAGGTTTCTAGGTTTTCTTTGACAGCCCCACTCAATCTTTACTAGATATGACATCTTCATCTCCAGCAAATAAGAGTGAAGAGTTCATATTGGCCAGTTATTGGTTGTTAGTTAGGTCACAGATTCAGTGAAGCGTGGAGTAGCCGCTCTCACACTGGTGAAAGGAGCTTAAATCAATCTGATTACAAACCTGCTTTGCGTCTGCAGCAAGCCTGCAGTCGGTCGACCAAACACGGCCATGAGCTTCAGCAGAAGCAAGCACAAAAGAGCCTTCTTCTCCTGAG[G/A]TGAGTCTTGCCACTGTTACCATTTTTACGTGTGTCTTTTAGTTGTTTCCGAATGAATGGTGATCGGGTGTTACGTAAAAAAGCATTCGGGCCTGTTACGTAACAGCGCTGCGTTTGTCTGTTAAACGCTGAACTATATTGACAGCGCACACAATTCATTTCTTGTCTCATTATGTCTCATGATTGGTCTTATGATGAGAGTGTGTACTGTACCAAGGCTATTTTACTAAACGAAAGCCAAAATTAAGACAAAAACCGAAAAAACAGAACTAAAATAAATACATTAAAATCACAACAAATAACTGACAAGATTAGCTAACAACAGTCACTGCAAAACTAACTGAAATTAAATAATTATTATTTTCAGAATTATTGAGCTCTTATTTTGTGGTGGGAAATCTAAGGAATAATATAAAATAAGTATTGGAAAACTATAATTATTATTATGAAGGATTAAAGGCATAAATGGTTTGGTTGCTTTGGATCATACAGTTTAAAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa39458
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000079770 None None 280 None 8
ENSDART00000136772 Nonsense 2192 2277 47 48
ENSDART00000147063 None None 300 None 7
Genomic Location (Zv9):
Chromosome 24 (position 29565059)
Other Location(s):
Assembly Chromosome Position
GRCz10 24 28563375
GRCz11 24 28642534
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAGATTTGAACCCAGCCGAAGCGTTCATGGAGAGCACATTTCCTGGCTG[C/A]ATTCAGAGGGAGAAACACTATAATACTCTACAGTACGAGATTGCTTCTTC
Long Flanking Sequence:
TAAAGTTGTCTATTAGTGTATAACAAAACCTACAAACTAACATCCCTAGATATTGTTTAAATTAGGTTTGGCCAGATTAAGCTCAACTCCGGGGGAAAAATTTCGACCCTATTTTGCTCCATATATATGCTCTCAGTCAATAATTTAGTCAATGTTTTTCTGTTCCACAGCATGGAGGAATGTGAAGCTCTCTGTACACGATTGGCCATCATGGTGAATGGAACTTTCAAGTGTCTTGGCACCATTCAACACCTCAAATACAAGTAAGATCCCAAACTACCGTATTTCATTTTTTATTACTACAGTAGGTGCAGTTTTGTTACACATTTTATCCACAATCATTATTTTGGATTGCTGTTCTCTGTATGTCTTTTAAAATCCGTTCCCTGCAGATTTGGTGATGGTTATGTGGTGACCATGAAAATCAGGGCTGCCAAAGTAGGTGCAGTACCAGATTTGAACCCAGCCGAAGCGTTCATGGAGAGCACATTTCCTGGCTG[C/A]ATTCAGAGGGAGAAACACTATAATACTCTACAGTACGAGATTGCTTCTTCATCCCTGGCCAAAATCTTTCAGGTCGTTTTGGCCAACAAGGAAATGCTAAATATCGAAGATTACTCTGTTTCCCAGACAACTTTGGACCAGGTATTTTATACGACACAGATGGCTTAGATCAATGTGTGCCATTTAGATTTTACCTAAGGCATCATTTACTCTCTCTGGATTTGTTCTGATATAGTGTGCCCTTACCTCTATTTGAGGATCAGGCAGCATTTAAAAAGTATCACAAAAGTCAATAGCCTAGTGGTTAGTGTGTCGACATATATAGGTGCTCATGGTGAACCAAGTTCGATTCTTGGCTTGAGGTGCTTTGCTGGTGCTTCCTTTCTTTCTGCTTCACTGTCTCCACTATATTTTCCTATAAATATACATATATTTACAAATATAAATACAAATTTATTAGTCTTCCTGTGATTTTTTTTCCTTTTTCAAATATTTTGTAA
Associated Phenotype:
Not determined