ZMP

abca4a

Ensembl ID:

ENSDARG00000057169

ZFIN ID:

ZDB-GENE-050517-3

Description:

ATP-binding cassette, sub-family A (ABC1), member 4a [Source:RefSeq peptide;Acc:NP_001002206]

Human Orthologue:

ABCA4

Human Description:

ATP-binding cassette, sub-family A (ABC1), member 4 [Source:HGNC Symbol;Acc:34]

Mouse Orthologue:

Abca4

Mouse Description:

ATP-binding cassette, sub-family A (ABC1), member 4 Gene [Source:MGI Symbol;Acc:MGI:109424]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa11328	Essential Splice Site	Available for shipment	Available now
sa39458	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa11328

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000079770	Essential Splice Site	None	280	1	8
ENSDART00000136772	None	None	2277	None	48
ENSDART00000147063	Essential Splice Site	None	300	1	7

Genomic Location (Zv9):

Chromosome 24 (position 29483657)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	24	28481973
GRCz11	24	28561132

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GGCCATGAGCTTCAGCAGAAGCAAGCACAAAAGAGCCTTCTTCTCCTGAG[G/A]TGAGTCTTGCCACTGTTACMATTTTTACGWGTGTCTTTTAGTYGTTTCCG

Long Flanking Sequence:

TTACTTCTATTGTTCAACAGACGAAAGAAACTCCAACAGGTTTGGAACAAGTGGAGGGAGAATAAATAATGACAGTGTTAATTTTTTGGCTTGAACTATCCATTAAAGTTTACATCGTGTAATTCTCACTCCCCCACCTCAGAATTGCAACTGACCTAACTATAAACTCGAAATTCAAGATACAGAAATAAAGTCAGAATTGCAGCGGGAAAAAACGAGGTTTCTAGGTTTTCTTTGACAGCCCCACTCAATCTTTACTAGATATGACATCTTCATCTCCAGCAAATAAGAGTGAAGAGTTCATATTGGCCAGTTATTGGTTGTTAGTTAGGTCACAGATTCAGTGAAGCGTGGAGTAGCCGCTCTCACACTGGTGAAAGGAGCTTAAATCAATCTGATTACAAACCTGCTTTGCGTCTGCAGCAAGCCTGCAGTCGGTCGACCAAACACGGCCATGAGCTTCAGCAGAAGCAAGCACAAAAGAGCCTTCTTCTCCTGAG[G/A]TGAGTCTTGCCACTGTTACCATTTTTACGTGTGTCTTTTAGTTGTTTCCGAATGAATGGTGATCGGGTGTTACGTAAAAAAGCATTCGGGCCTGTTACGTAACAGCGCTGCGTTTGTCTGTTAAACGCTGAACTATATTGACAGCGCACACAATTCATTTCTTGTCTCATTATGTCTCATGATTGGTCTTATGATGAGAGTGTGTACTGTACCAAGGCTATTTTACTAAACGAAAGCCAAAATTAAGACAAAAACCGAAAAAACAGAACTAAAATAAATACATTAAAATCACAACAAATAACTGACAAGATTAGCTAACAACAGTCACTGCAAAACTAACTGAAATTAAATAATTATTATTTTCAGAATTATTGAGCTCTTATTTTGTGGTGGGAAATCTAAGGAATAATATAAAATAAGTATTGGAAAACTATAATTATTATTATGAAGGATTAAAGGCATAAATGGTTTGGTTGCTTTGGATCATACAGTTTAAAAAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa39458

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000079770	None	None	280	None	8
ENSDART00000136772	Nonsense	2192	2277	47	48
ENSDART00000147063	None	None	300	None	7

Genomic Location (Zv9):

Chromosome 24 (position 29565059)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	24	28563375
GRCz11	24	28642534

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCAGATTTGAACCCAGCCGAAGCGTTCATGGAGAGCACATTTCCTGGCTG[C/A]ATTCAGAGGGAGAAACACTATAATACTCTACAGTACGAGATTGCTTCTTC

Long Flanking Sequence:

TAAAGTTGTCTATTAGTGTATAACAAAACCTACAAACTAACATCCCTAGATATTGTTTAAATTAGGTTTGGCCAGATTAAGCTCAACTCCGGGGGAAAAATTTCGACCCTATTTTGCTCCATATATATGCTCTCAGTCAATAATTTAGTCAATGTTTTTCTGTTCCACAGCATGGAGGAATGTGAAGCTCTCTGTACACGATTGGCCATCATGGTGAATGGAACTTTCAAGTGTCTTGGCACCATTCAACACCTCAAATACAAGTAAGATCCCAAACTACCGTATTTCATTTTTTATTACTACAGTAGGTGCAGTTTTGTTACACATTTTATCCACAATCATTATTTTGGATTGCTGTTCTCTGTATGTCTTTTAAAATCCGTTCCCTGCAGATTTGGTGATGGTTATGTGGTGACCATGAAAATCAGGGCTGCCAAAGTAGGTGCAGTACCAGATTTGAACCCAGCCGAAGCGTTCATGGAGAGCACATTTCCTGGCTG[C/A]ATTCAGAGGGAGAAACACTATAATACTCTACAGTACGAGATTGCTTCTTCATCCCTGGCCAAAATCTTTCAGGTCGTTTTGGCCAACAAGGAAATGCTAAATATCGAAGATTACTCTGTTTCCCAGACAACTTTGGACCAGGTATTTTATACGACACAGATGGCTTAGATCAATGTGTGCCATTTAGATTTTACCTAAGGCATCATTTACTCTCTCTGGATTTGTTCTGATATAGTGTGCCCTTACCTCTATTTGAGGATCAGGCAGCATTTAAAAAGTATCACAAAAGTCAATAGCCTAGTGGTTAGTGTGTCGACATATATAGGTGCTCATGGTGAACCAAGTTCGATTCTTGGCTTGAGGTGCTTTGCTGGTGCTTCCTTTCTTTCTGCTTCACTGTCTCCACTATATTTTCCTATAAATATACATATATTTACAAATATAAATACAAATTTATTAGTCTTCCTGTGATTTTTTTTCCTTTTTCAAATATTTTGTAA

Associated Phenotype:

Not determined