ZMP
abca4a
Ensembl ID:
ZFIN ID:
Description:
ATP-binding cassette, sub-family A (ABC1), member 4a [Source:RefSeq peptide;Acc:NP_001002206]
Human Orthologue:
ABCA4
Human Description:
ATP-binding cassette, sub-family A (ABC1), member 4 [Source:HGNC Symbol;Acc:34]
Mouse Orthologue:
Abca4
Mouse Description:
ATP-binding cassette, sub-family A (ABC1), member 4 Gene [Source:MGI Symbol;Acc:MGI:109424]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa11328 | Essential Splice Site | Available for shipment | Available now |
sa39458 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa11328
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Founder:
SL4_03_D12
KASP Assay Location:
Unknown
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000079770 | Essential Splice Site | None | 280 | 1 | 8 |
ENSDART00000136772 | None | None | 2277 | None | 48 |
ENSDART00000147063 | Essential Splice Site | None | 300 | 1 | 7 |
Genomic Location (Zv9):
Chromosome 24 (position 29483657)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 24 | 28481973 |
GRCz11 | 24 | 28561132 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCCATGAGCTTCAGCAGAAGCAAGCACAAAAGAGCCTTCTTCTCCTGAG[G/A]TGAGTCTTGCCACTGTTACMATTTTTACGWGTGTCTTTTAGTYGTTTCCG
Long Flanking Sequence:
TTACTTCTATTGTTCAACAGACGAAAGAAACTCCAACAGGTTTGGAACAAGTGGAGGGAGAATAAATAATGACAGTGTTAATTTTTTGGCTTGAACTATCCATTAAAGTTTACATCGTGTAATTCTCACTCCCCCACCTCAGAATTGCAACTGACCTAACTATAAACTCGAAATTCAAGATACAGAAATAAAGTCAGAATTGCAGCGGGAAAAAACGAGGTTTCTAGGTTTTCTTTGACAGCCCCACTCAATCTTTACTAGATATGACATCTTCATCTCCAGCAAATAAGAGTGAAGAGTTCATATTGGCCAGTTATTGGTTGTTAGTTAGGTCACAGATTCAGTGAAGCGTGGAGTAGCCGCTCTCACACTGGTGAAAGGAGCTTAAATCAATCTGATTACAAACCTGCTTTGCGTCTGCAGCAAGCCTGCAGTCGGTCGACCAAACACGGCCATGAGCTTCAGCAGAAGCAAGCACAAAAGAGCCTTCTTCTCCTGAG[G/A]TGAGTCTTGCCACTGTTACCATTTTTACGTGTGTCTTTTAGTTGTTTCCGAATGAATGGTGATCGGGTGTTACGTAAAAAAGCATTCGGGCCTGTTACGTAACAGCGCTGCGTTTGTCTGTTAAACGCTGAACTATATTGACAGCGCACACAATTCATTTCTTGTCTCATTATGTCTCATGATTGGTCTTATGATGAGAGTGTGTACTGTACCAAGGCTATTTTACTAAACGAAAGCCAAAATTAAGACAAAAACCGAAAAAACAGAACTAAAATAAATACATTAAAATCACAACAAATAACTGACAAGATTAGCTAACAACAGTCACTGCAAAACTAACTGAAATTAAATAATTATTATTTTCAGAATTATTGAGCTCTTATTTTGTGGTGGGAAATCTAAGGAATAATATAAAATAAGTATTGGAAAACTATAATTATTATTATGAAGGATTAAAGGCATAAATGGTTTGGTTGCTTTGGATCATACAGTTTAAAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39458
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Founder:
SL7_01_F12
KASP Assay Location:
Unknown
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000079770 | None | None | 280 | None | 8 |
ENSDART00000136772 | Nonsense | 2192 | 2277 | 47 | 48 |
ENSDART00000147063 | None | None | 300 | None | 7 |
Genomic Location (Zv9):
Chromosome 24 (position 29565059)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 24 | 28563375 |
GRCz11 | 24 | 28642534 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAGATTTGAACCCAGCCGAAGCGTTCATGGAGAGCACATTTCCTGGCTG[C/A]ATTCAGAGGGAGAAACACTATAATACTCTACAGTACGAGATTGCTTCTTC
Long Flanking Sequence:
TAAAGTTGTCTATTAGTGTATAACAAAACCTACAAACTAACATCCCTAGATATTGTTTAAATTAGGTTTGGCCAGATTAAGCTCAACTCCGGGGGAAAAATTTCGACCCTATTTTGCTCCATATATATGCTCTCAGTCAATAATTTAGTCAATGTTTTTCTGTTCCACAGCATGGAGGAATGTGAAGCTCTCTGTACACGATTGGCCATCATGGTGAATGGAACTTTCAAGTGTCTTGGCACCATTCAACACCTCAAATACAAGTAAGATCCCAAACTACCGTATTTCATTTTTTATTACTACAGTAGGTGCAGTTTTGTTACACATTTTATCCACAATCATTATTTTGGATTGCTGTTCTCTGTATGTCTTTTAAAATCCGTTCCCTGCAGATTTGGTGATGGTTATGTGGTGACCATGAAAATCAGGGCTGCCAAAGTAGGTGCAGTACCAGATTTGAACCCAGCCGAAGCGTTCATGGAGAGCACATTTCCTGGCTG[C/A]ATTCAGAGGGAGAAACACTATAATACTCTACAGTACGAGATTGCTTCTTCATCCCTGGCCAAAATCTTTCAGGTCGTTTTGGCCAACAAGGAAATGCTAAATATCGAAGATTACTCTGTTTCCCAGACAACTTTGGACCAGGTATTTTATACGACACAGATGGCTTAGATCAATGTGTGCCATTTAGATTTTACCTAAGGCATCATTTACTCTCTCTGGATTTGTTCTGATATAGTGTGCCCTTACCTCTATTTGAGGATCAGGCAGCATTTAAAAAGTATCACAAAAGTCAATAGCCTAGTGGTTAGTGTGTCGACATATATAGGTGCTCATGGTGAACCAAGTTCGATTCTTGGCTTGAGGTGCTTTGCTGGTGCTTCCTTTCTTTCTGCTTCACTGTCTCCACTATATTTTCCTATAAATATACATATATTTACAAATATAAATACAAATTTATTAGTCTTCCTGTGATTTTTTTTCCTTTTTCAAATATTTTGTAA
Associated Phenotype:
Not determined