Busch Lab

ZMP

FYCO1 (1 of 2)

Ensembl ID:
ENSDARG00000056689
Description:
FYVE and coiled-coil domain containing 1 [Source:HGNC Symbol;Acc:14673]
Human Orthologue:
FYCO1
Human Description:
FYVE and coiled-coil domain containing 1 [Source:HGNC Symbol;Acc:14673]
Mouse Orthologue:
Fyco1
Mouse Description:
FYVE and coiled-coil domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:107277]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa37778 Nonsense Available for shipment Available now
sa24397 Nonsense Available for shipment Available now
sa15873 Nonsense Available for shipment Available now
sa24398 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa37778
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111043 Nonsense 543 1497 7 17
Genomic Location (Zv9):
Chromosome 23 (position 40285165)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 40096000
GRCz11 23 39988911
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAGAGTTCATTTCCTGGAGAGGGAATCAGAGAAGCTTAGGAGCGAGAAT[C/T]AGAAGTTGGAGTATGAGTTGGAGAACAGCACCAAAAAGGAGGCCAAGAAG
Long Flanking Sequence:
AGATTCACGAGCTTTTGAATGAATTAAAAGAGGCTGAGAAGAAGAGGATGGATGCTCTGGCTGAAGGAGAAGAGAAGAGGAGGCATGCTGAACATCTTGCCGAGGAAGTCAAAGTGAAAGATGAAGCTCTCAAAGAGGCTGAGGTGAAAATGGCAGCTTGGATGGAGAAGGGTGAACAACTGCAAACCAGGGCGGTGGAGCAGCGTAATTTCATGGAGAAACTTCAAGGTGCACTTGCAGTAAGAGAGAAAGAGACCAGCAACCTGCAGAGGCAACTACGAGATCTTCAGAACTCTCTGGAGAACATGGAAAAGCAGGCCAATGTGGAGAAGAAGAGGATGCAAGATGATAAAGAAGAGCTTGAGATGAAAATGAATGGTCTAGAGGGGCTGTTACAATCACTTCGGACACAGTTAAAGGTTAAAGAATCTGATCTTCTCTCCAGTACCAAGAGAGTTCATTTCCTGGAGAGGGAATCAGAGAAGCTTAGGAGCGAGAAT[C/T]AGAAGTTGGAGTATGAGTTGGAGAACAGCACCAAAAAGGAGGCCAAGAAGATTGATGAATACAAGGATAGCTGCGCCAAGCTTATTGAGCAAAACACTAAGCTTCTGCAGACGGTGAATAAGAATGAAGAGAGCAAGAAAGAGTTGCTTGAAAACAAATCATCCTTGGAGAGCGAGTTGGCGGGATTGAGGGCCTCAGAGAAGCAGTTACGAGCTCAAATCGATGATGCCAAAGTGACTGTGGATGAACGAGAGCAGCGGCTGAGAGAGGAGAACAGAAATCTGGATGAGAGTCTGCAGAAGGCCAACATGCAGCTGGAGGAATCCGAGAGCTCAATTCGGCAAAAGGAGCAGGAGAACAAGGACCTCATGGAGGTTCAGGTCACTCTTAAATCAGCTCTCGCAGCCATGCAGAAAGAGATACGTGACATAAACAACCAGATCGGTGAACTTGAGAAGAATCTTGGAGTTGCGAGGTGTAACGAAGCAAATCTGAACGCG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24397
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111043 Nonsense 573 1497 7 17
Genomic Location (Zv9):
Chromosome 23 (position 40285255)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 40096090
GRCz11 23 39989001
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGCCAAGAAGATTGATGAATACAAGGATAGCTGCGCCAAGCTTATTGAG[C/T]AAAACACTAAGCTTCTGCAGACGGTGAATAAGAATGAAGAGAGCAAGAAA
Long Flanking Sequence:
AACATCTTGCCGAGGAAGTCAAAGTGAAAGATGAAGCTCTCAAAGAGGCTGAGGTGAAAATGGCAGCTTGGATGGAGAAGGGTGAACAACTGCAAACCAGGGCGGTGGAGCAGCGTAATTTCATGGAGAAACTTCAAGGTGCACTTGCAGTAAGAGAGAAAGAGACCAGCAACCTGCAGAGGCAACTACGAGATCTTCAGAACTCTCTGGAGAACATGGAAAAGCAGGCCAATGTGGAGAAGAAGAGGATGCAAGATGATAAAGAAGAGCTTGAGATGAAAATGAATGGTCTAGAGGGGCTGTTACAATCACTTCGGACACAGTTAAAGGTTAAAGAATCTGATCTTCTCTCCAGTACCAAGAGAGTTCATTTCCTGGAGAGGGAATCAGAGAAGCTTAGGAGCGAGAATCAGAAGTTGGAGTATGAGTTGGAGAACAGCACCAAAAAGGAGGCCAAGAAGATTGATGAATACAAGGATAGCTGCGCCAAGCTTATTGAG[C/T]AAAACACTAAGCTTCTGCAGACGGTGAATAAGAATGAAGAGAGCAAGAAAGAGTTGCTTGAAAACAAATCATCCTTGGAGAGCGAGTTGGCGGGATTGAGGGCCTCAGAGAAGCAGTTACGAGCTCAAATCGATGATGCCAAAGTGACTGTGGATGAACGAGAGCAGCGGCTGAGAGAGGAGAACAGAAATCTGGATGAGAGTCTGCAGAAGGCCAACATGCAGCTGGAGGAATCCGAGAGCTCAATTCGGCAAAAGGAGCAGGAGAACAAGGACCTCATGGAGGTTCAGGTCACTCTTAAATCAGCTCTCGCAGCCATGCAGAAAGAGATACGTGACATAAACAACCAGATCGGTGAACTTGAGAAGAATCTTGGAGTTGCGAGGTGTAACGAAGCAAATCTGAACGCGCAGCTTAAAGATAAGGCCACCCAGCTGGAAGATCGAGAGAAGCTCTGTGAGGAGCTCCAGGGAAGAGTGGAAGAACTGGAAAGTCGGCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15873
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111043 Nonsense 1172 1497 11 17
Genomic Location (Zv9):
Chromosome 23 (position 40303825)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 40114541
GRCz11 23 40007452
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CACAACCAGTCTTTACTCATTTYTCTTTTCAGAGATAAGGACGCTCTGTG[G/A]CAGAAGTCTGAYGCTCTAGAGTTCGAGCAGAARCTAAGAGCAGAGGAGCA
Long Flanking Sequence:
TACACCCCTTCATACAAAGATTTTTCAGGACAACTCACGAAACCAAGGGGTATATAATGTTAATGTTGTTTTGGTGTGTTTTAATTTTAAAGTTACGATCTTATTACCACATTAGATTGTTATGATAATATAATACAGTTTATGCCTTCAGTGATTTCCTGAAGATAAATGGCAAAAACAACAAATCTGGAATCACTACAGCCGTCGCCATCGTCTGATCTCATATGAAACAGGAGATCGCAATGACATTTGATGACATGTGCAGGTGCTTTAGTGCTGTCCAAATTCTTGGGGGTGAATTTTGAAGCCCTTCCCCTTCACCCTCTGTTTTAAGGGCCAAGGGGAAGGGGTAGAAGTACAAAAATAGAATTGGGATTGGGTCTTAGAACCACTTTAGGCTGAGTAAACGGTGAGTAAATATACATTTTTGGGTGCACTATCCCTTTAATTCACAACCAGTCTTTACTCATTTTTCTTTTCAGAGATAAGGACGCTCTGTG[G/A]CAGAAGTCTGATGCTCTAGAGTTCGAGCAGAAGCTAAGAGCAGAGGAGCAGTGGTGGCTGGTGGATAAAGAGGCCACACACTGTCTGGGCTGCCAGGGTCAGTTCACATGGTGGCTGCGGAGGCATCACTGCAGGTGGGCACATTCATTAACATCTACTCTGAACTCAAGTGATCACTCTCACCGTTAATCTTATTTCATTACAATGTGAAGTTTTGAAGACTTCTAGACAAGATTTTTATACTCCAAGCACTTTGATGATTGTATTAAAACTTATATCCCCAGTAATTATTGTAAGTTATTTATAGATATGATAATAAATGGCTTGCTTGACAAAGCCTGTTGGTAATAGTTTATTTAGTTTTAAACAGTTTGTAAAAGTATGAATAGGTAGGTAGGTGGACGGACAGACTGAACAGACAGACATAATTAACTTAGCATGAATTAGCTTTTTATTAAGTTTTAGTTTTAATTTGATTCTAGCATGGATTAGTATGTTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24398
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000111043 Essential Splice Site 1436 1497 15 17
Genomic Location (Zv9):
Chromosome 23 (position 40327175)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 40108742
GRCz10 23 40137881
GRCz11 23 40001653
GRCz11 23 40030792
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACTGTGGTGTACAGAGAGACACTTGACACACCTGTCGAGCAGGCCAAG[G/A]TAACAAACACACACATGCAAGACATTCAGAGGGTGTTGAGTGTGTCTTAA
Long Flanking Sequence:
TCTGAAGAACAGGAAGACATGATTTCAGTACAGGATGCAGAAATCACCCTCCTCAAGTCAGGAGAGCTCAGGTTAGTAAGTGCAGACACAAAACAATTCAATTTAATCCAAGTTTATTTGTATAGCGCTTTTCACAATCAATTTTGTTAGAAAGCAGCTTTACAAAAGGCGAACATTATTGCATTACAATCAAAATCTGAAAAATGAAAGTTATTATTCACACACACACACACACTGATTACGCTCCACTATTATTGTTTCCTCTGAATCTGTGCGTGTGTTTCTGCAGTGCCTCTGTGCCTCTGGATATAGATGAGATTCCTCATTTCGGCGATGGCTCCCGTGAGCTGTTTGTCAAGTCCAGTTGTTACAGCACCATTCCCATCACAGTGGGCGACCGCGGACCCATCATCAGCTGGGTTTTCTCCTCCGAGCCAAAGAGCATCTCCTTCACTGTGGTGTACAGAGAGACACTTGACACACCTGTCGAGCAGGCCAAG[G/A]TAACAAACACACACATGCAAGACATTCAGAGGGTGTTGAGTGTGTCTTAACAAGTCATTCGTTCATTTTCCTTTCGACTTAGTCTCTATTTCAGTGGTCACCACAGCGGAATGAACCAAACTATTCCAGCATATGTTTTACACAGCGGGTGCCCTTCCTACCGCAACCCAGAACAGGGAAACATCCATACACAAACACACTTATACACGATGGCCAATTTTAGCTTATTCAGTTCACCTGAAGTGCATGTGTTTGGACTGTGGGGCAAACTAGAGCACCCTGAGGAAACCCACACCAACACGGGGAGAACATGCAAACTCCACACAAAAACTGGGCCAGCTGGGACTCAAACCAGTGACCTTCTTGCTGTGTAGCCACTATGCCGCCCCAAGTAGTATGACTATTACTCTCATAATTCAGGCAGTTTCTTTAGTTTGAACTTCTTAACAATGTATCATAATTAAAATCTATCTTAATTAGATTTCACTCTGCCCCCCTGA
Associated Phenotype:
Not determined