ZMP
FYCO1 (1 of 2)
Ensembl ID:
Description:
FYVE and coiled-coil domain containing 1 [Source:HGNC Symbol;Acc:14673]
Human Orthologue:
FYCO1
Human Description:
FYVE and coiled-coil domain containing 1 [Source:HGNC Symbol;Acc:14673]
Mouse Orthologue:
Fyco1
Mouse Description:
FYVE and coiled-coil domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:107277]
Alleles
There are 7 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37778 | Nonsense | Available for shipment | Available now |
| sa24397 | Nonsense | Available for shipment | Available now |
| sa29994 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa15873 | Nonsense | Available for shipment | Available now |
| sa44041 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa6752 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa24398 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa37778
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111043 | Nonsense | 543 | 1497 | 7 | 17 |
Genomic Location (Zv9):
Chromosome 23 (position 40285165)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 40096000 |
| GRCz11 | 23 | 39988911 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAGAGTTCATTTCCTGGAGAGGGAATCAGAGAAGCTTAGGAGCGAGAAT[C/T]AGAAGTTGGAGTATGAGTTGGAGAACAGCACCAAAAAGGAGGCCAAGAAG
Long Flanking Sequence:
AGATTCACGAGCTTTTGAATGAATTAAAAGAGGCTGAGAAGAAGAGGATGGATGCTCTGGCTGAAGGAGAAGAGAAGAGGAGGCATGCTGAACATCTTGCCGAGGAAGTCAAAGTGAAAGATGAAGCTCTCAAAGAGGCTGAGGTGAAAATGGCAGCTTGGATGGAGAAGGGTGAACAACTGCAAACCAGGGCGGTGGAGCAGCGTAATTTCATGGAGAAACTTCAAGGTGCACTTGCAGTAAGAGAGAAAGAGACCAGCAACCTGCAGAGGCAACTACGAGATCTTCAGAACTCTCTGGAGAACATGGAAAAGCAGGCCAATGTGGAGAAGAAGAGGATGCAAGATGATAAAGAAGAGCTTGAGATGAAAATGAATGGTCTAGAGGGGCTGTTACAATCACTTCGGACACAGTTAAAGGTTAAAGAATCTGATCTTCTCTCCAGTACCAAGAGAGTTCATTTCCTGGAGAGGGAATCAGAGAAGCTTAGGAGCGAGAAT[C/T]AGAAGTTGGAGTATGAGTTGGAGAACAGCACCAAAAAGGAGGCCAAGAAGATTGATGAATACAAGGATAGCTGCGCCAAGCTTATTGAGCAAAACACTAAGCTTCTGCAGACGGTGAATAAGAATGAAGAGAGCAAGAAAGAGTTGCTTGAAAACAAATCATCCTTGGAGAGCGAGTTGGCGGGATTGAGGGCCTCAGAGAAGCAGTTACGAGCTCAAATCGATGATGCCAAAGTGACTGTGGATGAACGAGAGCAGCGGCTGAGAGAGGAGAACAGAAATCTGGATGAGAGTCTGCAGAAGGCCAACATGCAGCTGGAGGAATCCGAGAGCTCAATTCGGCAAAAGGAGCAGGAGAACAAGGACCTCATGGAGGTTCAGGTCACTCTTAAATCAGCTCTCGCAGCCATGCAGAAAGAGATACGTGACATAAACAACCAGATCGGTGAACTTGAGAAGAATCTTGGAGTTGCGAGGTGTAACGAAGCAAATCTGAACGCG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24397
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111043 | Nonsense | 573 | 1497 | 7 | 17 |
Genomic Location (Zv9):
Chromosome 23 (position 40285255)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 40096090 |
| GRCz11 | 23 | 39989001 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGCCAAGAAGATTGATGAATACAAGGATAGCTGCGCCAAGCTTATTGAG[C/T]AAAACACTAAGCTTCTGCAGACGGTGAATAAGAATGAAGAGAGCAAGAAA
Long Flanking Sequence:
AACATCTTGCCGAGGAAGTCAAAGTGAAAGATGAAGCTCTCAAAGAGGCTGAGGTGAAAATGGCAGCTTGGATGGAGAAGGGTGAACAACTGCAAACCAGGGCGGTGGAGCAGCGTAATTTCATGGAGAAACTTCAAGGTGCACTTGCAGTAAGAGAGAAAGAGACCAGCAACCTGCAGAGGCAACTACGAGATCTTCAGAACTCTCTGGAGAACATGGAAAAGCAGGCCAATGTGGAGAAGAAGAGGATGCAAGATGATAAAGAAGAGCTTGAGATGAAAATGAATGGTCTAGAGGGGCTGTTACAATCACTTCGGACACAGTTAAAGGTTAAAGAATCTGATCTTCTCTCCAGTACCAAGAGAGTTCATTTCCTGGAGAGGGAATCAGAGAAGCTTAGGAGCGAGAATCAGAAGTTGGAGTATGAGTTGGAGAACAGCACCAAAAAGGAGGCCAAGAAGATTGATGAATACAAGGATAGCTGCGCCAAGCTTATTGAG[C/T]AAAACACTAAGCTTCTGCAGACGGTGAATAAGAATGAAGAGAGCAAGAAAGAGTTGCTTGAAAACAAATCATCCTTGGAGAGCGAGTTGGCGGGATTGAGGGCCTCAGAGAAGCAGTTACGAGCTCAAATCGATGATGCCAAAGTGACTGTGGATGAACGAGAGCAGCGGCTGAGAGAGGAGAACAGAAATCTGGATGAGAGTCTGCAGAAGGCCAACATGCAGCTGGAGGAATCCGAGAGCTCAATTCGGCAAAAGGAGCAGGAGAACAAGGACCTCATGGAGGTTCAGGTCACTCTTAAATCAGCTCTCGCAGCCATGCAGAAAGAGATACGTGACATAAACAACCAGATCGGTGAACTTGAGAAGAATCTTGGAGTTGCGAGGTGTAACGAAGCAAATCTGAACGCGCAGCTTAAAGATAAGGCCACCCAGCTGGAAGATCGAGAGAAGCTCTGTGAGGAGCTCCAGGGAAGAGTGGAAGAACTGGAAAGTCGGCAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa29994
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111043 | Nonsense | 660 | 1497 | 7 | 17 |
Genomic Location (Zv9):
Chromosome 23 (position 40285516)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 40096351 |
| GRCz11 | 23 | 39989262 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGCCAACATGCAGCTGGAGGAATCCGAGAGCTCAATTCGGCAAAAGGAG[C/T]AGGAGAACAAGGACCTCATGGAGGTTCAGGTCACTCTTAAATCAGCTCTC
Long Flanking Sequence:
AAGAAGAGCTTGAGATGAAAATGAATGGTCTAGAGGGGCTGTTACAATCACTTCGGACACAGTTAAAGGTTAAAGAATCTGATCTTCTCTCCAGTACCAAGAGAGTTCATTTCCTGGAGAGGGAATCAGAGAAGCTTAGGAGCGAGAATCAGAAGTTGGAGTATGAGTTGGAGAACAGCACCAAAAAGGAGGCCAAGAAGATTGATGAATACAAGGATAGCTGCGCCAAGCTTATTGAGCAAAACACTAAGCTTCTGCAGACGGTGAATAAGAATGAAGAGAGCAAGAAAGAGTTGCTTGAAAACAAATCATCCTTGGAGAGCGAGTTGGCGGGATTGAGGGCCTCAGAGAAGCAGTTACGAGCTCAAATCGATGATGCCAAAGTGACTGTGGATGAACGAGAGCAGCGGCTGAGAGAGGAGAACAGAAATCTGGATGAGAGTCTGCAGAAGGCCAACATGCAGCTGGAGGAATCCGAGAGCTCAATTCGGCAAAAGGAG[C/T]AGGAGAACAAGGACCTCATGGAGGTTCAGGTCACTCTTAAATCAGCTCTCGCAGCCATGCAGAAAGAGATACGTGACATAAACAACCAGATCGGTGAACTTGAGAAGAATCTTGGAGTTGCGAGGTGTAACGAAGCAAATCTGAACGCGCAGCTTAAAGATAAGGCCACCCAGCTGGAAGATCGAGAGAAGCTCTGTGAGGAGCTCCAGGGAAGAGTGGAAGAACTGGAAAGTCGGCAGAGGGATTTGGAAGTGGAGAAGACAAAAGCAGAAAGAGCCTTTGTTAAACAAACAGAGATGATTCAGAGTCTTGAAGCACAGAGAAACCTGGCAGAGAAGACACAACTTGAAAAAAGCACATGTCAAGCTAAAGAAACTAAAGAGATGGCCTTAAAATTGACTCTTCTAGAAGATCAACTGGGATTGAGTGCGAAGGAAGTTTCTAAGCTACAAGAGGAAGTGGTTAATCTCAGGGCTAAACTTCACAGTGCTGTGGAGGAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15873
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111043 | Nonsense | 1172 | 1497 | 11 | 17 |
Genomic Location (Zv9):
Chromosome 23 (position 40303825)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 40114541 |
| GRCz11 | 23 | 40007452 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CACAACCAGTCTTTACTCATTTYTCTTTTCAGAGATAAGGACGCTCTGTG[G/A]CAGAAGTCTGAYGCTCTAGAGTTCGAGCAGAARCTAAGAGCAGAGGAGCA
Long Flanking Sequence:
TACACCCCTTCATACAAAGATTTTTCAGGACAACTCACGAAACCAAGGGGTATATAATGTTAATGTTGTTTTGGTGTGTTTTAATTTTAAAGTTACGATCTTATTACCACATTAGATTGTTATGATAATATAATACAGTTTATGCCTTCAGTGATTTCCTGAAGATAAATGGCAAAAACAACAAATCTGGAATCACTACAGCCGTCGCCATCGTCTGATCTCATATGAAACAGGAGATCGCAATGACATTTGATGACATGTGCAGGTGCTTTAGTGCTGTCCAAATTCTTGGGGGTGAATTTTGAAGCCCTTCCCCTTCACCCTCTGTTTTAAGGGCCAAGGGGAAGGGGTAGAAGTACAAAAATAGAATTGGGATTGGGTCTTAGAACCACTTTAGGCTGAGTAAACGGTGAGTAAATATACATTTTTGGGTGCACTATCCCTTTAATTCACAACCAGTCTTTACTCATTTTTCTTTTCAGAGATAAGGACGCTCTGTG[G/A]CAGAAGTCTGATGCTCTAGAGTTCGAGCAGAAGCTAAGAGCAGAGGAGCAGTGGTGGCTGGTGGATAAAGAGGCCACACACTGTCTGGGCTGCCAGGGTCAGTTCACATGGTGGCTGCGGAGGCATCACTGCAGGTGGGCACATTCATTAACATCTACTCTGAACTCAAGTGATCACTCTCACCGTTAATCTTATTTCATTACAATGTGAAGTTTTGAAGACTTCTAGACAAGATTTTTATACTCCAAGCACTTTGATGATTGTATTAAAACTTATATCCCCAGTAATTATTGTAAGTTATTTATAGATATGATAATAAATGGCTTGCTTGACAAAGCCTGTTGGTAATAGTTTATTTAGTTTTAAACAGTTTGTAAAAGTATGAATAGGTAGGTAGGTGGACGGACAGACTGAACAGACAGACATAATTAACTTAGCATGAATTAGCTTTTTATTAAGTTTTAGTTTTAATTTGATTCTAGCATGGATTAGTATGTTAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44041
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111043 | Essential Splice Site | 1217 | 1497 | 12 | 17 |
Genomic Location (Zv9):
Chromosome 23 (position 40305760)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 40116476 |
| GRCz11 | 23 | 40009387 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACAAATATGATTATTTGTACCTGCTTTACTTGGGTTGTGTTTTCTGGCA[G/T]GTTGTGTGGCCGTATCTTCTGCTACTATTGCAGCAACAATTACGTGATGA
Long Flanking Sequence:
AAAGGTCATCAGTGATTGGCTGCTGGCTAGACTGAGTTAAATGAGCTCATCCATTAGTATGACAGTCTGACGGGAAGTTATGAGCTCACAAAGTTGGATCTAATGTTAAGTCAATTACAGTTTTTGCAATGGAAGTCTGTCTACGGGACAGTTGCTAGGGTGCAGTTTTTGGTAGTTAGGGTGTGGCTAGAAAGTTAAAAGTTATCAGCAGTTTGGTAGTCTGAGTTAAATGAGCCCAGTTAGACGTCTGTGTGACAGTCTGACGGAGAGTTATGAGCTCACAAAGTTTGGTCCAATGTTAAGTCTATGGGATTTTTCTGACGGGCCCTGAAAGTTTTTTCGAAAACCGAAAGCCGGATGAGTCAGAAGCTTACAGAGTCCGAATAGTTTGAAGGTCATAGCTCAAAAGCTCTAGGAGGAAATGAAGTCAGAATTTTAATCTCGGACATTTACAAATATGATTATTTGTACCTGCTTTACTTGGGTTGTGTTTTCTGGCA[G/T]GTTGTGTGGCCGTATCTTCTGCTACTATTGCAGCAACAATTACGTGATGACCAAAAACTCAAAGAAGGAGCGCTGCTGTCGAGAGTGTTACACACAACACGGCGCTGTGGTGGAGAGATTCACCAAAGCTGAACTCAACAGCTCATCAGACAACCAGCCATCAAACACTGCCGCTCAGCTGCCACCGCCTCCATATATACCCACACCAAGAGTTACAGGTACAAACACATCACAAGTGTCCAATTAGAAACTGCTAGCAAATTTAAAAAAAGAAACAAAAACTAATACATTGATACAGAAGTATAAAGTAGAAAAACTGAAATGGTGTATTTACTATAATCATACTGGAACAGTAGTTTGGCCCTTTCGCTGTGTCTCATTTCTGAGGCTGCATCTTTCGAAGGGCACTATGTCACAAGTCTTATTTCACACTAATTCGAAGTCTTCATTTGACTTGGATAGGGCTGGGCGATATGGGCCAAAAAAAACATATCTCTGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6752
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111043 | Essential Splice Site | 1335 | 1497 | 13 | 17 |
Genomic Location (Zv9):
Chromosome 23 (position 40315715)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 40126429 |
| GRCz11 | 23 | 40019340 |
KASP Assay ID:
554-4701.1 (used for ordering genotyping assays)
KASP Sequence:
GCACCACCAATGGATCACATGAGGAGGAAGGAGGACAAACCGGAGATAAG[T/A]AAGTSTGTAAACACACAAAATAATGTCATACAGTTTTATGCAAAAGTTTG
Long Flanking Sequence:
CATTTTTGATGCTGACTTTTTATTTGTTTTCTCAGTTTTTTTGAGCACCCACTTTATTTATTTTTTACCATTATTATTATTATTATTAGCATTATTTTTATTAGCATTGTTATTTTAGTCATTTTAGTTCTACGTTTCATTTCAATTAAATGCCAGAGCATTTAGAATTTTTATGAAGATTTTTTAAAATTTAATTTAATTTAATTTAATTTTTAGCTTTCTTGCATTTATTAACATTGATTTCCAATCATTTTAGTTACATAACAACAGAGATCAGTTAAATGTTCTCTATATATTCTAAATATTGCATTGTACTCTCTTTTTTCATCTCCTGATGTCATCCTGACGTGTCCTGACATGCAGTTACAGATCCTGGTGAGAGGGCTGATGATGGAGCGTTTGACATTATTACAGACGAGGAAGTGAACCAGATCTATGACAGCGACTCGCGCACCACCAATGGATCACATGAGGAGGAAGGAGGACAAACCGGAGATAAG[T/A]AAGTGTGTAAACACACAAAATAATGTCATACAGTTTTATGCAAAAGTTTGGGGACCCCTGATAATTTTCACTCTTGAAAGCCATGACACTTTAAAAATAAAACTAAATTTAAACTAAATTTAAACTTTACTGACTTTATATGTGTTTTCTCAGTTTTTTTTTTGAGCATCACTTTATTTTTTAACATGGTTCATAAAACATATACAGCACATCAGTTTTCAACACTGACGATAATAATAAGAATTGTTTCTTGAGCAGCAAATCAAAAAATTAAATTCTTTCAATAATAAAATGATAATGCAGTTCTTTTTTTAATAATGTTGAGTAATATTTGAAAAATATATTAAATTAGAATAAGTTGTTTTGGATTGTGCAAATTTTTCTTAATATTATGGATTTTTCTTTATTTTTGAACCAATAAATTGAGCCTCTGCAAGGATTAAGGTCTTCTTTCAAAAACCTGCAGACTCCAGACTTTTGAAAAGTAATTTAAACTATAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24398
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000111043 | Essential Splice Site | 1436 | 1497 | 15 | 17 |
Genomic Location (Zv9):
Chromosome 23 (position 40327175)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 40108742 |
| GRCz10 | 23 | 40137881 |
| GRCz11 | 23 | 40001653 |
| GRCz11 | 23 | 40030792 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACTGTGGTGTACAGAGAGACACTTGACACACCTGTCGAGCAGGCCAAG[G/A]TAACAAACACACACATGCAAGACATTCAGAGGGTGTTGAGTGTGTCTTAA
Long Flanking Sequence:
TCTGAAGAACAGGAAGACATGATTTCAGTACAGGATGCAGAAATCACCCTCCTCAAGTCAGGAGAGCTCAGGTTAGTAAGTGCAGACACAAAACAATTCAATTTAATCCAAGTTTATTTGTATAGCGCTTTTCACAATCAATTTTGTTAGAAAGCAGCTTTACAAAAGGCGAACATTATTGCATTACAATCAAAATCTGAAAAATGAAAGTTATTATTCACACACACACACACACTGATTACGCTCCACTATTATTGTTTCCTCTGAATCTGTGCGTGTGTTTCTGCAGTGCCTCTGTGCCTCTGGATATAGATGAGATTCCTCATTTCGGCGATGGCTCCCGTGAGCTGTTTGTCAAGTCCAGTTGTTACAGCACCATTCCCATCACAGTGGGCGACCGCGGACCCATCATCAGCTGGGTTTTCTCCTCCGAGCCAAAGAGCATCTCCTTCACTGTGGTGTACAGAGAGACACTTGACACACCTGTCGAGCAGGCCAAG[G/A]TAACAAACACACACATGCAAGACATTCAGAGGGTGTTGAGTGTGTCTTAACAAGTCATTCGTTCATTTTCCTTTCGACTTAGTCTCTATTTCAGTGGTCACCACAGCGGAATGAACCAAACTATTCCAGCATATGTTTTACACAGCGGGTGCCCTTCCTACCGCAACCCAGAACAGGGAAACATCCATACACAAACACACTTATACACGATGGCCAATTTTAGCTTATTCAGTTCACCTGAAGTGCATGTGTTTGGACTGTGGGGCAAACTAGAGCACCCTGAGGAAACCCACACCAACACGGGGAGAACATGCAAACTCCACACAAAAACTGGGCCAGCTGGGACTCAAACCAGTGACCTTCTTGCTGTGTAGCCACTATGCCGCCCCAAGTAGTATGACTATTACTCTCATAATTCAGGCAGTTTCTTTAGTTTGAACTTCTTAACAATGTATCATAATTAAAATCTATCTTAATTAGATTTCACTCTGCCCCCCTGA
Associated Phenotype:
Not determined