ZMP
tspan18a
Ensembl ID:
ZFIN ID:
Description:
tetraspanin 18a [Source:RefSeq peptide;Acc:NP_001002734]
Human Orthologue:
TSPAN18
Human Description:
tetraspanin 18 [Source:HGNC Symbol;Acc:20660]
Mouse Orthologue:
Tspan18
Mouse Description:
tetraspanin 18 Gene [Source:MGI Symbol;Acc:MGI:1917186]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa12254 | Essential Splice Site | Available for shipment | Available now |
| sa40896 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa12254
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000079186 | Essential Splice Site | None | 241 | 2 | 9 |
| ENSDART00000134717 | Essential Splice Site | 1 | 253 | 2 | 9 |
Genomic Location (Zv9):
Chromosome 7 (position 27930043)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 26532982 |
| GRCz11 | 7 | 26804175 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTCAGAAAAGGCAACAGCTGGAAGGGAGAGACATTTACAGGTACATATG[G/A]TATGGTGATTTTTGATCATTTTTAMTCATGCATCAAAATYTGATGGCTCT
Long Flanking Sequence:
CATGCTCTGTGCTCCGAGGGTACAGGCTGACAAAGAGTTTTCCACAGTGCATTAAGTGCTCAGGACACAAGAGCCTTAGTGTATTGTTTTAGTAGTGTGGCCTCCTAGCTGATTATCAAAGCGTTAATGATATTCTGCGTCTCGGAAGAGTTAGAAAGCATCTTCAAGCTTGAAGGTTAAACCGATTGCGAGGGTCTCTTTTTTGTTTATGTTTGCCACCAATGATCTCAAGGTCAGATTGTTAGCTTACAGTCTTAGTTGGAAGTTCTTGTTGCAGAAGGGATCCAGGCTGAAGCACTAAAATGATGTATAGATGCTGATGTTTTAAAGGGATTGGAGAAAGTATTTCCTCGGCATTTGTGATTCTCATATGAAAGTATATGCCCTATAATGACTGTCTTTATTTTATGCACATTTATCCACAGTCGCAGAGAAGAAGTGTGGAGCAGATTTCAGAAAAGGCAACAGCTGGAAGGGAGAGACATTTACAGGTACATATG[G/A]TATGGTGATTTTTGATCATTTTTAATCATGCATCAAAATCTGATGGCTCTTGTCACTAAGGTCAGCATGAAAATTCACACGTTCCCTTTTGAAAACTGAAACCCAGGCTCATTCTGAAAACGTACCGCTATATAAATTTCTCTCAAATATGTCCCAGGAGCTACTTTTTTGGAATTTTTGTTTTCGTGAATCCACTAGAGGCTGCTGTGTATGTTTTTTAAGATGTTCTCTCATGAGTGCCATTCGCGCCTGCTGTTCTCATGTAAATCCACTGGTTGACCGATCGACTGACCCACCCTCCTCCTTTCCTAAACCCAACCAATAGTGTTTTCAAAAGCATCTATTGACCAGCATCTATCCACTTCCCTAAACTAAACTGACAGTTTTAAAAAGCAATCCAGGAAAAGAAAAGCCCTCGCCTGATTTTTACCCCGTTTTCAGATTTTAACACATTTTCACCCTTTTGTTTAATTGTTTTTTTTATTTTTAGCTTTTGCTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40896
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000079186 | Nonsense | 69 | 241 | 4 | 9 |
| ENSDART00000134717 | Nonsense | 81 | 253 | 4 | 9 |
Genomic Location (Zv9):
Chromosome 7 (position 27954018)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 26556957 |
| GRCz11 | 7 | 26828150 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACTGGAGTCTATGCAATTCTGATCATGGGCGGGATGCTGTTCCTACTG[G/T]GATTTCTGGGCTGCTGTGGAGCCATTCGTGAAAATAAATGCCTTCTATTG
Long Flanking Sequence:
AAAGACTTATTTTCATTTTACAGGACTTTTAATGTATCTGTATTTAATGTTTTAAAACCAGTTTTTAATGATATTCAGGTGCAGTCTTGCCTTCCTGTCACAATATACAGTTCAAAAGAGTCTGAGGGATTCAAGTTGCCACTCTAAACAAACTGTAAACAAGCGGACTGATCTGGTGCCAGCATGCCTTCGCTTTGCTCATGAACCACACTGAACTTCCTTTGTTCCTCAAAGGTGTTTAGATGGCAGCCTTGTGAACTTCCCACTGCCACACTAGTGCTGTGGGAAAATGAGCTCATATGAGAAGCCGTATTTTGCATTTTTATCATGCTGTACTAAGCCACGTTCACCTCCTTCAGCTTGGAGGTTCTTTCCTTCTAGGGGTGGGAATCTGGGTGCTGGTGGATCCAACTGGTTTTCGGGAGATTGTGGCCGCCAACTCTCTGCTGTTCACTGGAGTCTATGCAATTCTGATCATGGGCGGGATGCTGTTCCTACTG[G/T]GATTTCTGGGCTGCTGTGGAGCCATTCGTGAAAATAAATGCCTTCTATTGTTTGTATGGGATTTTATTTCTTTCTGGATATACTGTATACATTATTGTTTTCATTCGTTATGCAATGTACAGTGCTCAGCATATATAAGTACACCCCTCACAAATCTATCTTTTAAATTTATATTTTTAATAGGAAGTTATGCAATATTATATTTGTGCATATTCATTAGATTAATCAGTACTTAAGCCAAATCTGGAGCGTATCTAACAAAATAACTTACGACTAAAAACTAATACACCCAAATTAATATGGTTTAGAAAAATATTAAATACAAATTGAATAAAAGAGGAAAAATCAAGAAAAGCAAAAAAAAATTTTTTGTTGAAAATTTTGTAGGTTGTATTTGTTTTTTGCAATTTTTTACTTGAATTTAGTTGTATTATCTTTCAATTTCTAAACACGTTTGGTGACTAAAAAATTATTTTAATAAGTATATCTGTTTAATAAAT
Associated Phenotype:
Not determined