ZMP
zgc:171814
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC100144564 [Source:RefSeq peptide;Acc:NP_001116530]
Human Orthologues:
AC144571.1, GFRA1, GFRA2, GFRA3
Human Descriptions:
GDNF family receptor alpha 1 [Source:HGNC Symbol;Acc:4243]
GDNF family receptor alpha 2 [Source:HGNC Symbol;Acc:4244]
GDNF family receptor alpha 3 [Source:HGNC Symbol;Acc:4245]
GDNF family receptor alpha 2 [Source:HGNC Symbol;Acc:4244]
GDNF family receptor alpha 3 [Source:HGNC Symbol;Acc:4245]
Mouse Orthologues:
Gfra1, Gfra2, Gfra3
Mouse Descriptions:
glial cell line derived neurotrophic factor family receptor alpha 1 Gene [Source:MGI Symbol;Acc:MGI:
glial cell line derived neurotrophic factor family receptor alpha 2 Gene [Source:MGI Symbol;Acc:MGI:
glial cell line derived neurotrophic factor family receptor alpha 3 Gene [Source:MGI Symbol;Acc:MGI:
glial cell line derived neurotrophic factor family receptor alpha 2 Gene [Source:MGI Symbol;Acc:MGI:
glial cell line derived neurotrophic factor family receptor alpha 3 Gene [Source:MGI Symbol;Acc:MGI:
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa42161 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa30969 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa44783 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa42160 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa42161
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000079176 | Essential Splice Site | 18 | 440 | 1 | 8 |
ENSDART00000141103 | None | None | 437 | None | 9 |
ENSDART00000079176 | Essential Splice Site | 18 | 440 | 1 | 8 |
ENSDART00000141103 | None | None | 437 | None | 9 |
Genomic Location (Zv9):
Chromosome 13 (position 14167085)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 14175080 |
GRCz11 | 13 | 14306072 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGAGACGTAAGGACAGCTGGAAACGCTGCAACGTGTTCATCAACGCTGG[T/C]AGGACAAAGACATTTTCTTCAGTAGCTATGAATTGTTTCCTGAAAACCTT
Long Flanking Sequence:
GGAATGCAAAATAGGCTATATTCCCCTTATACCTTAAATAAACATTTATCTAGAAAAAGCTTTTATGTAATTTTAAAATCTGCAATATAGTATGTGAATGTGGAGTTCTGGTGTTACAAACTTACAGTAGCCTAACCTTCTTAGATTGAATGAACAAAACATATTTATTTCTTTATTTAGAAAAATGCAGCATGTTTTGAACAATGTATGTGTTCAATTAAATTTATTATTGTAAAGAAAAATAAATAAGTAATTTTACATTTCCGACATCAAATGAAAGAAAAGAGCATGTGAGAAAAAAACTGACTGTTATGAAGCCGCGTGTAGCAGGTGTGAGGCAGCATGCGCGCGGTTATTCGTTAGTGGATGCACGTTTGTTGTTTGCTAGCTACAAATCCAAGGAAGGGATGATCAGTCCACGATTTCACCAAAGAGCTTGTGTTAAAAATGAAGAGACGTAAGGACAGCTGGAAACGCTGCAACGTGTTCATCAACGCTGG[T/C]AGGACAAAGACATTTTCTTCAGTAGCTATGAATTGTTTCCTGAAAACCTTGCGTAACTCACAAGCCTTCTTGTTATTGCCAGCAGTTAGCGTCCGCATGCAAATTAGCGATGTGCTGTAAACCGTTTGGATTTACCTTAGCACTTGAACTTCAATGCAAAATATGCTATGCGAAATTTAAGTAACGTGGCAGCATTGTGGTTAATGAGTCAAAATATCCTCAAATGTATTTGTATCAGTGCATTGTTATCAGTAAAGCTAACTTGTCAACTAAATTTTGTTGTTGCTCACCAGACACTGTGGTATGTGTTTAAGGAGGTCATATTTTTGCTGTTTGGAAATTGTGTTTTTATTAATTCCCCAACAACAACATTTATTTGAGATGTTTTTTTATCCATGTAAAATGACAATACTTTTTCTTAGCCTATTAGATGAATTAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30969
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000079176 | Essential Splice Site | 18 | 440 | 1 | 8 |
ENSDART00000141103 | None | None | 437 | None | 9 |
ENSDART00000079176 | Essential Splice Site | 18 | 440 | 1 | 8 |
ENSDART00000141103 | None | None | 437 | None | 9 |
Genomic Location (Zv9):
Chromosome 13 (position 14167085)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 14175080 |
GRCz11 | 13 | 14306072 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGAGACGTAAGGACAGCTGGAAACGCTGCAACGTGTTCATCAACGCTGG[T/C]AGGACAAAGACATTTTCTTCAGTAGCTATGAATTGTTTCCTGAAAACCTT
Long Flanking Sequence:
GGAATGCAAAATAGGCTATATTCCCCTTATACCTTAAATAAACATTTATCTAGAAAAAGCTTTTATGTAATTTTAAAATCTGCAATATAGTATGTGAATGTGGAGTTCTGGTGTTACAAACTTACAGTAGCCTAACCTTCTTAGATTGAATGAACAAAACATATTTATTTCTTTATTTAGAAAAATGCAGCATGTTTTGAACAATGTATGTGTTCAATTAAATTTATTATTGTAAAGAAAAATAAATAAGTAATTTTACATTTCCGACATCAAATGAAAGAAAAGAGCATGTGAGAAAAAAACTGACTGTTATGAAGCCGCGTGTAGCAGGTGTGAGGCAGCATGCGCGCGGTTATTCGTTAGTGGATGCACGTTTGTTGTTTGCTAGCTACAAATCCAAGGAAGGGATGATCAGTCCACGATTTCACCAAAGAGCTTGTGTTAAAAATGAAGAGACGTAAGGACAGCTGGAAACGCTGCAACGTGTTCATCAACGCTGG[T/C]AGGACAAAGACATTTTCTTCAGTAGCTATGAATTGTTTCCTGAAAACCTTGCGTAACTCACAAGCCTTCTTGTTATTGCCAGCAGTTAGCGTCCGCATGCAAATTAGCGATGTGCTGTAAACCGTTTGGATTTACCTTAGCACTTGAACTTCAATGCAAAATATGCTATGCGAAATTTAAGTAACGTGGCAGCATTGTGGTTAATGAGTCAAAATATCCTCAAATGTATTTGTATCAGTGCATTGTTATCAGTAAAGCTAACTTGTCAACTAAATTTTGTTGTTGCTCACCAGACACTGTGGTATGTGTTTAAGGAGGTCATATTTTTGCTGTTTGGAAATTGTGTTTTTATTAATTCCCCAACAACAACATTTATTTGAGATGTTTTTTTATCCATGTAAAATGACAATACTTTTTCTTAGCCTATTAGATGAATTAATTATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa44783
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000079176 | Nonsense | 71 | 440 | 2 | 8 |
ENSDART00000141103 | Nonsense | 68 | 437 | 2 | 9 |
Genomic Location (Zv9):
Chromosome 13 (position 14112181)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 14120176 |
GRCz11 | 13 | 14251168 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGCAGGCGGAGGAAGCGTCAAGCTGGGTCCAGGAGCACGAAACCACTGC[G/T]AGAACGCCGTTACAGCCCTCATGTCCAGTCCCCTACACAGATGCCAATGC
Long Flanking Sequence:
AGTAAAGAGTGAGTGATGATGCCAGAATTTTAAATTTAGGGTGAACTATTCTTTTAAGCGGACGGTATACTAATACTGGAATGACTGCTGGTTGGCACTTAATTATAAAGTTAGAATACAGCATGTAGAAAAAGTGTTACCAAATGTTTCCTAATTTTATATACAGCATCTACTCTCCAAGACTATTTGGTAATAAATGTAATAATATGCTTCAAACCATCTGGGTAATGCAAGGGATTATTTTGCAATAACAAGTGGCTGTGCATTAGCTAACATTAAATACCATAGTGTGACCTTATTGTATAGTGTTCCTGACAGATCAAATTGTTCTGAAAATTGCAGGGGTGCCGCGGCTGGTGTCTGGGGGCCGATGGGATTGTCTGACTGCGGGGGATTCATGCTCCAGCGATGAAGCGTGCAGCCCGCGTTTGAGAACCCTGCGGCAGTGCGTTGCAGGCGGAGGAAGCGTCAAGCTGGGTCCAGGAGCACGAAACCACTGC[G/T]AGAACGCCGTTACAGCCCTCATGTCCAGTCCCCTACACAGATGCCAATGCAAACGGGGTATGAAGAGAGAGAAGAACTGTCTTAGTATTTACTGGAGCCTCAAGCAATCCATACTGCACGGTGAGAGCCAATCCATATTCATCATTTCCTTTTGTCACATACAAAGCACTCGCTCACAAAATGATGCAATTACAAGTTCTAATACCCACACCCACACGGTCCCCGGGAACCACTTCAATGGATGCTAATTAGTCGCTGTGTTTTAATACGCTAACCAGTTTAGCATTATAGAAGCATTACTTCAAACTGAACTTTTACCTGAGACAGTCTCATTAATTCACATACGCACGCAAAATACTCTGTTACCATAGCCACCAAATCCTTGTTTGTGTGTGTGTGTGTGTGTGTTTACAGGGCTGAGCTTGGTGGAGAATTACCCCTACGAGCCTGTTGAGCGGGGTTTTGATTATGTTCGCCTGGCCTCCATTGCTGCAGGTCAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42160
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000079176 | Essential Splice Site | 137 | 440 | 3 | 8 |
ENSDART00000141103 | Essential Splice Site | 134 | 437 | 3 | 9 |
Genomic Location (Zv9):
Chromosome 13 (position 14111685)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 14119680 |
GRCz11 | 13 | 14250672 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCTGTTGAGCGGGGTTTTGATTATGTTCGCCTGGCCTCCATTGCTGCAG[G/A]TCAGTGATTTGCACAGACACACTATGCCGATTATGTGCTATGATGTTGGA
Long Flanking Sequence:
CTGCGAGAACGCCGTTACAGCCCTCATGTCCAGTCCCCTACACAGATGCCAATGCAAACGGGGTATGAAGAGAGAGAAGAACTGTCTTAGTATTTACTGGAGCCTCAAGCAATCCATACTGCACGGTGAGAGCCAATCCATATTCATCATTTCCTTTTGTCACATACAAAGCACTCGCTCACAAAATGATGCAATTACAAGTTCTAATACCCACACCCACACGGTCCCCGGGAACCACTTCAATGGATGCTAATTAGTCGCTGTGTTTTAATACGCTAACCAGTTTAGCATTATAGAAGCATTACTTCAAACTGAACTTTTACCTGAGACAGTCTCATTAATTCACATACGCACGCAAAATACTCTGTTACCATAGCCACCAAATCCTTGTTTGTGTGTGTGTGTGTGTGTGTTTACAGGGCTGAGCTTGGTGGAGAATTACCCCTACGAGCCTGTTGAGCGGGGTTTTGATTATGTTCGCCTGGCCTCCATTGCTGCAG[G/A]TCAGTGATTTGCACAGACACACTATGCCGATTATGTGCTATGATGTTGGAACAGATATTTGGAACTGATCACGATGTGTTTTGTCACTTCTGTGCCAAGCATTAGCAGTGAAGAGTTATTAATAGGGCAGAGCTTAATAGCTTACAACAGCAAAACATGAGCGCTTTGTTTAATGTACTTGGCTATAGCATAGTTGAGTTCATCGGCACGGCTGACGATAAACTGCATTTCCTACGATACAAGGCATGCATTAGGGACCTGTCAAGAGCAGAACAAACATTTCATTGTGGGCCAGAGATTTTCTGGTTGGACCCAGCAAAGACGACTAAACTGTCGGATGTTTCTTTTGTAATCAAGGCTTTTCGCTCCTGGCTCTCTCATCTCTCTCCCATCTCATTACATTGACTCAAAATAGCAGTGTACCAAGTTTAGAAACTTATTTGTGAAGGAGCCACACCACTAAAGCTGTCAGTCTGTCAGCCTCAGTTTATGGGGTGCTT
Associated Phenotype:
Not determined