ZMP

htatsf1

Ensembl ID:

ENSDARG00000056649

ZFIN ID:

ZDB-GENE-040426-1578

Description:

HIV TAT specific factor 1 [Source:RefSeq peptide;Acc:NP_957497]

Human Orthologue:

HTATSF1

Human Description:

HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:5276]

Mouse Orthologue:

Htatsf1

Mouse Description:

HIV TAT specific factor 1 Gene [Source:MGI Symbol;Acc:MGI:1919709]

Alleles

There are 4 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa13523	Essential Splice Site	Available for shipment	Available now
sa13135	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa13523

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000079174	Essential Splice Site	312	450	8	10

Genomic Location (Zv9):

Chromosome 10 (position 27297027)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	10	26699821
GRCz11	10	26661534

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GACAGAATGTGAGAAATTCGGGCAAGTGAAGAAAGTGATCATTTTTGATG[T/A]AAGTCCTCTTYTACTCCTGCAACATATTGACCTTATTCTTCAYGWACRAG

Long Flanking Sequence:

ACGTATCTGCAGCTCAAACCAGGTCCGAATTATTTGCATACGGAGTTGATTAAAACTCCACGCACCTCCTGGACTACTCTCCATTGGAAATTAACGACTTCCGGTCTGTCGCTTGTTGTTTGTAGTGTTCAGTGGAAAGGCGGCTTTATTTATTTATACATGTTTATAAAAAATATTCCAATGTATGTCTATTTCCAGAATTCATTAAAATGTAATAATTTTTATTATGATTTTTAAAATTGCATTTAAAGTTTAATTACATTTATTCATTGAGTAATTTGGTTTATTTACTTTTTATTTAGTTTGTTTTCAAAGTTTAACAAAGCAAATTTATGCATTAAAAACACTTAACGAATGCAAACTTTTGACTCGTAATGTATTTAAAAGCTGCCCGTGTAATCTCCTGCAGGAGGATCCTCTGGTCCTCAACGAGTATAGAGATGATCTGCGGACAGAATGTGAGAAATTCGGGCAAGTGAAGAAAGTGATCATTTTTGATG[T/A]AAGTCCTCTTTTACTCCTGCAACATATTGACCTTATTCTTCACGAACGAGCGGGCACAGCCATTGGAATTTTTGGCTCAAGACTTCCGGTCTCATTCACTTCCATTGATTATTATATGTTAAAAACATTTGTTGTGCTGCTTCATGTTGCAAACAGATTTTTTCTTTTTATATTATTCTACTTTTTATATATAGTTATGAACACACTTGCTAGTATAGCAAGTAGTCTGACTGTTTTCTGCTGTGTTATTATTCCTAGTCATTTCTTCCATAGGCAGCTTAATCAGAACTACTAAAACAATCGCAAAAACAAGTGCATTTTCACATTGAAGAATAAGGTCAACACTGCTCATTTAAATGTGTCTTATTTACTCTGCTGTGTGCTTTCTGCATGGACATCAGAGGCACCCTGATGGAGTGGCGTCAGTGGCATTTAAGGAGCCTGAAGAGGCAGACGCGTGTCAGGTGGCTTTGAACGGACGCTGGTTTGGAGGAAGGAAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa13135

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000079174	Nonsense	364	450	10	10

Genomic Location (Zv9):

Chromosome 10 (position 27302285)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	10	26705079
GRCz11	10	26666792

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TATTCTTCATTATCTCTGTKTGTTTGGTCACCCAGRTTGAGGAAACGTCA[C/T]GAGAGCGAGAAGAGAGACTGAAAGGCTGGTYGTCTTTTCTGGGCGAYGAA

Long Flanking Sequence:

TTACTTCCATTGTATCTGTTCAGCTGAGGGAACGGAGCCAACCTCATGACGTCAGACACAGTGACATTCCGAGATGTCAGCACCCTAGCTCTAAAAGCTATAATAAAATGTTGTTTTCTTCTAAATGGTTTCATTAATCGAGTTTGTTTAATATATTTTCAATAAGGTGGAAACCAGTTTGTCTGCGCAATAGCCTAGTGGTTAGTGGTCGACATATGGTGCTGTAGCACTTCAGGGAGTCCCGAGTTCAAATCCCGGCTCGAGGACATTTCCCGTCCCTAACCCCTCTCTCTCCCACTTCGCTTCCTGTCTGAAATACTGTCCTATCCACTTAATAAAGGCAAAAAGGCCAAAAATAAATCTAAAAAAAAAAAGAAACCAGTTTACAAAATAATGTAAACTTGACTGACTGCTTCACTTCCACTTTAATTTAGCTGCAGTAGCCTGCTTTATTCTTCATTATCTCTGTTTGTTTGGTCACCCAGGTTGAGGAAACGTCA[C/T]GAGAGCGAGAAGAGAGACTGAAAGGCTGGTCGTCTTTTCTGGGCGATGAAAAAGGATCTGGCGAAGCTAAAGCTAACTCCACAAAAACAGACGAACAACAGAATTCCAGCACACAAGAAGCAGCAGCAGCAGAACAGACCCAGCAGGAGCCACATGTAAACGAAAGCAGCACAAAACCACAGGAGGAGAAAAATGAGGAGGAAGGAGGAGGAATGGCATCGACTGATAGCAGTTTAGCAGGAAGTGATGATGAAGATGCGTAACTTCTTTAATGTCTCACTCATACATCTCAACACCAACAGTGTTTTCATTTTAAATGCCTGTTAATGAATCGCATCATATTCCAATTTGACTGTAAATAATAATTTGTGATCTGTTTTCTCTCACTTCCCCGTGTTATGATGTGTGATCCATTTGAACTTCTGTCAATATAGTTTTATAGTAAAAATCATATTTTGTGACCTCATCATTGTTTCTTGCTTTCATGAAAAAACAAACAA

Associated Phenotype:

Not determined