ZMP
copb1
Ensembl ID:
ZFIN ID:
Description:
coatomer subunit beta [Source:RefSeq peptide;Acc:NP_001002013]
Human Orthologue:
COPB1
Human Description:
coatomer protein complex, subunit beta 1 [Source:HGNC Symbol;Acc:2231]
Mouse Orthologue:
Copb1
Mouse Description:
coatomer protein complex, subunit beta 1 Gene [Source:MGI Symbol;Acc:MGI:1917599]
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa34079 | Essential Splice Site | Available for shipment | Available now |
| sa20952 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa34079
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000079042 | Essential Splice Site | 107 | 953 | 3 | 22 |
Genomic Location (Zv9):
Chromosome 7 (position 28931196)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 27534135 |
| GRCz11 | 7 | 27805328 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGCAAACTTCTTCAGGAGATGATCTTGGTCTGTGATGCCTACAGGAAGG[T/C]GAGTATGAAACATGGACCTTTTATGTCTATTGCTTTATTGTGATAGACTG
Long Flanking Sequence:
ATAAAAAAAATAAATATATATAAAATAATTAATTTCTGTGTTAGCAAACCTGAATCTTCATTAGACATTATTGAAGGTTTCAGTGTCATAGGTTTTTTTCTCAAAGAAGTTTTTTGTTATTATTGTTTTGGTTGAAAGCATACGTGGTTCGTATATATATTTTTCAAGGATACTATAATAAGTTGAAAATTAAAAACATTTCTGACCCTAACCTAATTAGTAAATGTGAGGCTTAAAGTGCAGCTTTTTTTTTATTTCCGTCAAAACAGAAAAAGGAGAAATCAAAGCCAAAACGGAGGCTTTGAAGAAGGTCATCATCATGATCCTGAATGGAGAGAAACTGCCAGGTCTTTTGATGACCATCATCCGCTTCGTTCTGCCCCTTCAAGACCACACAATTAAGAAACTACTCTTAGTTTTTTGGGAAATTGTTCCCAAGACCACTCCTGATGGCAAACTTCTTCAGGAGATGATCTTGGTCTGTGATGCCTACAGGAAGG[T/C]GAGTATGAAACATGGACCTTTTATGTCTATTGCTTTATTGTGATAGACTGAGTGTGTTGTCTTTGTCTAAAAATGGTGTTTGTTATGTGTCTTTAGGATCTCCAGCATCCCAATGAGTTCATCCGTGGCTCCACACTGCGTTTCTTGTGCAAGCTGAAAGAATCCGAACTGCTGGAACCCCTCATGCCAGCAATCCGTGCCTGTCTAGAGCATCGTCACAGCTACGTACGGCGCAATGCAGTCCTGGCCATCTACACTATCTACAGGTGATGAAATAAATTTTAAGGCTATTAAAAAACAAAAAAATAATGTTTTTAAATCAAAATTGAAAGCTTAAAAATGTATTAAATTCACTGAAGCATGTTGTTCTAGGTCTTCAATATATTTTAAATAACATTTAAAATTTTTTAGTGTTTAAAAATCTTACACATAATACTTATAAAAAATTAGTGGTGGTTGTGTAATATTTTTATTTAAATGTAAAATATAATTGGCTTTAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20952
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000079042 | Nonsense | 342 | 953 | 9 | 22 |
Genomic Location (Zv9):
Chromosome 7 (position 28933824)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 27536763 |
| GRCz11 | 7 | 27807956 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTTGAGGGTTTTGACCACTCCTGACCTCGAGGTCCGCAAGAAGACTTTA[C/T]AGTTGGCGTTGGACCTGGTGTCATCCCGCAATGTGGAGGAGGTGTGTGTC
Long Flanking Sequence:
TTGTTTAGGTCTGCCATGCGAACCCCTCAGAGCGAGCTCGTTTCATCCGCTGTATTTACAATCTGCTGCAGTCGTCGAGTCCTGCTGTTAAATATGAAGCAGCTGGAACTCTGGTTACTCTGTCCAGCGCTCCCACCGCCATCAAGGTACAACATTTAGCACTAGGGGTTTTCACCATATACTGTTTTTTGCATGATGTTAAAGTGGACTTACATTATTTAAATGTTTTTTTTCAGGCTGCTGCTCAGTGCTACATTGATCTGATCATTAAAGAGAGCGATAACAACGTTAAACTCATTGTTCTAGACAGGCTGATTGAGTTGAAGGAACACCCGACACACGAGCGTGTACTGCAGGTACACATCAGTTCAGCGTCTCTGTACAACACATTCATTTTGCAAGTCAGTAAACCTGTCACTGTCTTCTGCTCGTAGGACTTGGTGATGGATATTTTGAGGGTTTTGACCACTCCTGACCTCGAGGTCCGCAAGAAGACTTTA[C/T]AGTTGGCGTTGGACCTGGTGTCATCCCGCAATGTGGAGGAGGTGTGTGTCACAAACTGTACTATTATTATTATTATTATTATTATTATTAATTATTATTATTATTTTTTTCATTTTCAAATTCTACTACATTTTCTTTAGGATTCCTTTTTATTATTTTTTTAACATTTTTATTTTTAGTTTCCAAAACAAAATGCATATATAACTTACACTTCATATATGTATAACTTACACAATCTGTCATATAGAAAGAGACTTACAGATCTTGCATATGCTTTGTGTTTACTTTCCTTTAACGACAACAACTATAAACATTAAAAGGGAGTAATTGAGCTACAAATCCTTTAGAAGATGGACTCTATACTGCTCAGTAAGCGCAGTCATTCGAATGAGTTAAACCGAGGCCCTCGCTCTCTGTGGTCGTTAAAAATCCCAGGATGTCCTTCGAAAAAGAGTAGGGGTTTAACCCTGACATCCTGCCAAATTTGCCCACTGGATTCT
Associated Phenotype:
Not determined