ZMP
sf3a3
Ensembl ID:
ZFIN ID:
Description:
splicing factor 3A subunit 3 [Source:RefSeq peptide;Acc:NP_001004289]
Human Orthologue:
SF3A3
Human Description:
splicing factor 3a, subunit 3, 60kDa [Source:HGNC Symbol;Acc:10767]
Mouse Orthologue:
Sf3a3
Mouse Description:
splicing factor 3a, subunit 3 Gene [Source:MGI Symbol;Acc:MGI:1922312]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa12602 | Nonsense | Available for shipment | Available now |
sa39239 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa43249 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa18610 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa12602
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000078924 | Nonsense | 138 | 501 | 7 | 19 |
ENSDART00000141102 | Nonsense | 56 | 419 | 3 | 14 |
Genomic Location (Zv9):
Chromosome 19 (position 16735089)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 17398693 |
GRCz11 | 19 | 17303055 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTATGTGATTATAGACTTKGTGGAGTTCACTGATGAAGAGGGTTATGGG[C/T]GATACCTGGATCTCCATGACTGCTACCTAAAATATATTAATCTAAAAGGA
Long Flanking Sequence:
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTCTACAATCGACTCAAGCTAATCAAGGAATTTCACAGAAAGCATCCTAATGAGGTAGACAAAGGGATTTGTCTTTTACTGTCATTTCTGTTTTGTCATTCGAAATACTCAGTCTTTGTTGTGTCAATTTCAGATCTGTGTGCCCATGTCAGTGGAGTTTGAGGAGCTCATGAAAGCCAAAGACAACCCTAGCGAGGAGGCACAAAGTAAGTGAGAATAAAGAGTCCACTCTGAGGAACACATTTATGATCAACAGTTCAAATATTGAGGGCATGTCAGAATCCTTTCTGTTTATACAGTTAAAGCATTTAACAAAAACTCTTTTGTCTGTTGGTGTTGAATCTAAAATTGTTAATGTTTTCATTCATGGATTGAATGACACTTGAGTGTTCTTTATGTGATTATAGACTTGGTGGAGTTCACTGATGAAGAGGGTTATGGG[C/T]GATACCTGGATCTCCATGACTGCTACCTAAAATATATTAATCTAAAAGGAGTAGAGGTACAGCCTGACATCTTTGAATTGATTATCTCTAAAGAAGTAAACCAAATGAAAGTAAACCTTTTGTGCTTCTGTATCTTGTTCTTTTTTTTAGAAACTGGAGTATGTTACCTATCTGTCAACATTCGATCAGCTCTTTGACATTTCTAAAGACAGGAAGAATGCTGAATATAAGAAGTTGGTGAAAGTATATTTTTTAAATCACACAAGTCTAAATTAAGCTTTAAAATAATTTTGAAATTGCAATATGACTTAGTGTTTATAATTAATCAGAAAGGATCTAAATCACTACCAAAAATGTACATCTTGTTAGACTTCCCAGAAAAACAACATGTGAAAAAAAATGTGTATTTGTTCTTCTGCTTATAACTATGCCTATAATTTGAAAATCAAATATTAATAATCCTATTCAACTAATGACAAAATTGTGGATCAGACCTGTGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39239
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000078924 | Essential Splice Site | 156 | 501 | 7 | 19 |
ENSDART00000141102 | Essential Splice Site | 74 | 419 | 3 | 14 |
Genomic Location (Zv9):
Chromosome 19 (position 16735032)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 17398636 |
GRCz11 | 19 | 17302998 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGATCTCCATGACTGCTACCTAAAATATATTAATCTAAAAGGAGTAGAG[G/A]TACAGCCTGACATCTTTGAATTGATTATCTCTAAAGAAGTAAACCAAATG
Long Flanking Sequence:
ATTCTACAATCGACTCAAGCTAATCAAGGAATTTCACAGAAAGCATCCTAATGAGGTAGACAAAGGGATTTGTCTTTTACTGTCATTTCTGTTTTGTCATTCGAAATACTCAGTCTTTGTTGTGTCAATTTCAGATCTGTGTGCCCATGTCAGTGGAGTTTGAGGAGCTCATGAAAGCCAAAGACAACCCTAGCGAGGAGGCACAAAGTAAGTGAGAATAAAGAGTCCACTCTGAGGAACACATTTATGATCAACAGTTCAAATATTGAGGGCATGTCAGAATCCTTTCTGTTTATACAGTTAAAGCATTTAACAAAAACTCTTTTGTCTGTTGGTGTTGAATCTAAAATTGTTAATGTTTTCATTCATGGATTGAATGACACTTGAGTGTTCTTTATGTGATTATAGACTTGGTGGAGTTCACTGATGAAGAGGGTTATGGGCGATACCTGGATCTCCATGACTGCTACCTAAAATATATTAATCTAAAAGGAGTAGAG[G/A]TACAGCCTGACATCTTTGAATTGATTATCTCTAAAGAAGTAAACCAAATGAAAGTAAACCTTTTGTGCTTCTGTATCTTGTTCTTTTTTTTAGAAACTGGAGTATGTTACCTATCTGTCAACATTCGATCAGCTCTTTGACATTTCTAAAGACAGGAAGAATGCTGAATATAAGAAGTTGGTGAAAGTATATTTTTTAAATCACACAAGTCTAAATTAAGCTTTAAAATAATTTTGAAATTGCAATATGACTTAGTGTTTATAATTAATCAGAAAGGATCTAAATCACTACCAAAAATGTACATCTTGTTAGACTTCCCAGAAAAACAACATGTGAAAAAAAATGTGTATTTGTTCTTCTGCTTATAACTATGCCTATAATTTGAAAATCAAATATTAATAATCCTATTCAACTAATGACAAAATTGTGGATCAGACCTGTGCTCGTTGCTGTTTTAAGTTGGCATATAGCTAAGCTTTGATCTCATGGCTCTTTTTTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43249
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000078924 | Nonsense | 206 | 501 | 9 | 19 |
ENSDART00000141102 | Nonsense | 124 | 419 | 5 | 14 |
Genomic Location (Zv9):
Chromosome 19 (position 16734462)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 17398066 |
GRCz11 | 19 | 17302428 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTTGGAGTACCTGCAGGAATACACAGATCGCGTCAAGCCTTTGCTGGAT[C/T]AGAATGAGCTGTATGGAAAGATTTTGGCAGAGTTTGAGAAGAAGTGGGAG
Long Flanking Sequence:
TCTGTATCTTGTTCTTTTTTTTAGAAACTGGAGTATGTTACCTATCTGTCAACATTCGATCAGCTCTTTGACATTTCTAAAGACAGGAAGAATGCTGAATATAAGAAGTTGGTGAAAGTATATTTTTTAAATCACACAAGTCTAAATTAAGCTTTAAAATAATTTTGAAATTGCAATATGACTTAGTGTTTATAATTAATCAGAAAGGATCTAAATCACTACCAAAAATGTACATCTTGTTAGACTTCCCAGAAAAACAACATGTGAAAAAAAATGTGTATTTGTTCTTCTGCTTATAACTATGCCTATAATTTGAAAATCAAATATTAATAATCCTATTCAACTAATGACAAAATTGTGGATCAGACCTGTGCTCGTTGCTGTTTTAAGTTGGCATATAGCTAAGCTTTGATCTCATGGCTCTTTTTTTTGGCAGGTACCTGGAGATGTTGTTGGAGTACCTGCAGGAATACACAGATCGCGTCAAGCCTTTGCTGGAT[C/T]AGAATGAGCTGTATGGAAAGATTTTGGCAGAGTTTGAGAAGAAGTGGGAGACTGGAATGTTTCCAGGCTGGCCGGTGGGTTTGTATGCCTATATGCTTACATCTGCATTCATAATGTAATCAGGTTTTTCGGAACATCCCTGACTTTAATAATAAGAGGGCAGATAGATTTGATGTACTGATAGATCAACGTTGGAGCACCATGCTTCATTTGTACTTGTGATTAACCACCAAAAGAGAGGAATATCATTCCCAAGTACAGATCTGTGAAGCATGTTTTGATTAGTTTTTTTTTTTTTTTTTGCTTTTGACATGTTGTAAAAACTAGCCTGCAAAGACAAATCATCTAATAATTGTTGAGATGTTAAAGCAGATGAATTACAGAAATTTAACAACAACATTGTGTTCTACTGTATTCATCTAAAGAAGAACTAGCAGACATAAAAAAAATCGGAATACCAAATCTCACCCTCAAAAATCAAGTTTATATTAGTATATGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18610
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000078924 | Essential Splice Site | 458 | 501 | 17 | 19 |
ENSDART00000141102 | Essential Splice Site | 376 | 419 | 13 | 14 |
Genomic Location (Zv9):
Chromosome 19 (position 16725593)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 17389197 |
GRCz11 | 19 | 17293559 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGACCCATCTGGATGGTTATTTATATTTAATTNNNNGTTTGTTTCTCTGCAAT[A/C]GTGTGGTCAAAACTGAAGTCACAGAAAGCATTGGAGCGATGGCAGCCTGA
Long Flanking Sequence:
GAGCAGACTATATGCTCTAGATTTTCTAAAAACAGATAACTGTCACATCTAAGTTAGATATTTTTCTTTTTCAAAAGAATGAAAAAATAGTCTGGTATAAATCAAGCAGAAAAACGTTTATTTGCTATTGCTAAGATGTAAGGACGTCATAAACCTAAATTAATAGATTTATTTAAATAGAATGTCAAATGCATAAAAAGATGAAGTATAAAGTGGAAATGAGGATGGATCATTGAATATGGGTGCAGTGAGCTGTGTCATTTTTATTTATCTTGCTTGTAAAGTAATTTTTAAAACTCATTCGCAATAGTACATATACACATTGTAATTTCACAGACAAATCACTCAACCCAATAAGAAGTCAAAACAAAATGTGAATAAAAAACAATGTCAGTTAATAATGCATTGTCATCATTTCATGATTGGTCAGTATTTCTACATGTAACATTAGAGACCCATCTGGATGGTTATTTATATTTAATTGTTTGTTTCTCTGCAAT[A/C]GTGTGGTCAAAACTGAAGTCACAGAAAGCATTGGAGCGATGGCAGCCTGACACAGAGGTGGGTGATTCTAAAACACCTTTTGTTTTGTAAAGGTGTCTTGCAAAAGCTCTTCTCTGGCTGAAGCTTCTATTGTGTTTTTATCGATGATTTGATCTTGATCTCAAATATCCAATATCTTGATATTTCTGTTTATTATTTCTTGCCCTTGCAGGAGGAGTATGAAGACTCCAGTGGAAATGTTGTCAACAAGAAGACTTATGAGGATTTGAAACGACAGGGACTGCTGTAGAGTCCTTAACAACATACACATGAAATTTGCGCAATGTAAATACTAAAGCACATGTTTCTTTCAGTCATAGTGAATAGAGCGGTGCAGAAATAGCAATAAAACCTGGAAGAGTAATTAGCTAACCCTAACCCTAACCCTAACCCTAACCCTAACAGGTTTCTAGAATTCAGTTTATCAAGTAATATCTGTGGTAAGCATAATGTGATAATAC
Associated Phenotype:
Not determined