ZMP
si:dkey-21k4.1
Ensembl ID:
ZFIN IDs:
Description:
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 [Source:UniProtKB/Swiss-Prot
Human Orthologue:
OGFOD2
Human Description:
2-oxoglutarate and iron-dependent oxygenase domain containing 2 [Source:HGNC Symbol;Acc:25823]
Mouse Orthologue:
Ogfod2
Mouse Description:
2-oxoglutarate and iron-dependent oxygenase domain containing 2 Gene [Source:MGI Symbol;Acc:MGI:1913
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa17801 | Nonsense | Available for shipment | Available now |
| sa20432 | Splice Site, Nonsense | Available for shipment | Available now |
| sa40441 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa17801
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000078664 | Nonsense | 45 | 345 | 2 | 8 |
| ENSDART00000133641 | Nonsense | 45 | 345 | 2 | 7 |
The following transcripts of ENSDARG00000056211 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 29686869)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 27442167 |
| GRCz11 | 5 | 28042320 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCRWCTGAACTTCGCTGACATTTGCTTAAGAWCCTCAGATCCCTGGGTTG[T/A]GAGTCTGAATCCCAATTCAGAGACGTGATCGGAAAGGTGAGTANNNNATAAGTG
Long Flanking Sequence:
TGCATAGAATAGTTCCACTCATATAGAAGTGAACAATTATTAAAGCTGACGATATAAATCCTATGTTAAATGAGCGAAGCTTTTTGTTTCTCTACGGACACAATTTTGGGTTGTTCCAAAACAATCACATAAGCGTGCGGAGCTCTAAACAGATTGACAGTTCAACCATTCTGGTCATAATGTGTTTTCATTGCCTTTAAAATATTTTAAAAACACAAATCATACATATTAAGTCTGTATAAATGTATAACAGTGTGTTATTTGACTTATAATATACGCCATGGAGAGATTTTACACATGCAGTTGCTTTTTCACAGACAATATTTTTCTTGAAGAATACAAACTTCATGTTCGTTTCGTCTCAGAGAACCAGTTTAGGAAGGACTATCAAAATGTAAGTAATTTACAGCAAGACGGGCTCATGTCTTCATGTTAAACAGTTTGCCAATTCCGTCTGAACTTCGCTGACATTTGCTTAAGATCCTCAGATCCCTGGGTTG[T/A]GAGTCTGAATCCCAATTCAGAGACGTGATCGGAAAGGTGAGTAATAAGTGTGCTCTCGAGAACAGCGATAACGATGAAGATCAAGGCTGTCAGAGAGCGGTTATTCACTCACTCGTGTATTTATAGATTCAGGCAGAAATCGAAAGACGCCAAAATCATAAATTGAAATCTACAGAGAGAGCAGCTGTCATCAAGGAGATTTATACACCTCTACACCAACATGTTTATCATCTTCAGGTACTTATGATCAGCAACACGGGCAGTCTGTGATTTATGTCGTCCACTGACTTACTGGAATATAATTTATCATCTCTAGGAATCTTTCTTAGCCCCAGAGCTTTTAGAGATGGTCAAATATTGTGCTTCAAGTGAAGCAAATGTGCAAGGACTGTTGAAACTCATCCAGACAGAGGCAGGTGAGCTGCTGCTTTACACGTGTTCCAATTTATTAATAAGAAGGAAAAATCACATGCTAACTAATTCTGTTTACTGAAAATTTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20432
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000078664 | Splice Site, Nonsense | 94 | 345 | 3 | 8 |
| ENSDART00000133641 | Splice Site, Nonsense | 94 | 345 | 3 | 7 |
The following transcripts of ENSDARG00000056211 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 29687104)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 27442402 |
| GRCz11 | 5 | 28042555 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGTCATCAAGGAGATTTATACACCTCTACACCAACATGTTTATCATCTT[C/T]AGGTACTTATGATCAGCAACACGGGCAGTCTGTGATTTATGTCGTCCACT
Long Flanking Sequence:
TGTATAAATGTATAACAGTGTGTTATTTGACTTATAATATACGCCATGGAGAGATTTTACACATGCAGTTGCTTTTTCACAGACAATATTTTTCTTGAAGAATACAAACTTCATGTTCGTTTCGTCTCAGAGAACCAGTTTAGGAAGGACTATCAAAATGTAAGTAATTTACAGCAAGACGGGCTCATGTCTTCATGTTAAACAGTTTGCCAATTCCGTCTGAACTTCGCTGACATTTGCTTAAGATCCTCAGATCCCTGGGTTGTGAGTCTGAATCCCAATTCAGAGACGTGATCGGAAAGGTGAGTAATAAGTGTGCTCTCGAGAACAGCGATAACGATGAAGATCAAGGCTGTCAGAGAGCGGTTATTCACTCACTCGTGTATTTATAGATTCAGGCAGAAATCGAAAGACGCCAAAATCATAAATTGAAATCTACAGAGAGAGCAGCTGTCATCAAGGAGATTTATACACCTCTACACCAACATGTTTATCATCTT[C/T]AGGTACTTATGATCAGCAACACGGGCAGTCTGTGATTTATGTCGTCCACTGACTTACTGGAATATAATTTATCATCTCTAGGAATCTTTCTTAGCCCCAGAGCTTTTAGAGATGGTCAAATATTGTGCTTCAAGTGAAGCAAATGTGCAAGGACTGTTGAAACTCATCCAGACAGAGGCAGGTGAGCTGCTGCTTTACACGTGTTCCAATTTATTAATAAGAAGGAAAAATCACATGCTAACTAATTCTGTTTACTGAAAATTTCGCAGCTTCGAGAGTGTTTCGGTTCCAGGTGTTCCGAAAGGAATTCTGCAAGGACCTTCTAGAAGAGCTGGAGCATTTTGAACAGTCGGATGCACCCAAGGGCAGGCCGAACACCATGAACAATTATGGGGTAAAGGTTTTATTATAAAGGTCAAGGACTTTGCAAGAGACACTCACTAAAATATAATTTAGTGTAACACAAATAAATAATAATAAAATATTGTTAGGCTTAAATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40441
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000078664 | Essential Splice Site | 94 | 345 | 3 | 8 |
| ENSDART00000133641 | Essential Splice Site | 94 | 345 | 3 | 7 |
The following transcripts of ENSDARG00000056211 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 5 (position 29687107)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 27442405 |
| GRCz11 | 5 | 28042558 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCATCAAGGAGATTTATACACCTCTACACCAACATGTTTATCATCTTCAG[G/A]TACTTATGATCAGCAACACGGGCAGTCTGTGATTTATGTCGTCCACTGAC
Long Flanking Sequence:
ATAAATGTATAACAGTGTGTTATTTGACTTATAATATACGCCATGGAGAGATTTTACACATGCAGTTGCTTTTTCACAGACAATATTTTTCTTGAAGAATACAAACTTCATGTTCGTTTCGTCTCAGAGAACCAGTTTAGGAAGGACTATCAAAATGTAAGTAATTTACAGCAAGACGGGCTCATGTCTTCATGTTAAACAGTTTGCCAATTCCGTCTGAACTTCGCTGACATTTGCTTAAGATCCTCAGATCCCTGGGTTGTGAGTCTGAATCCCAATTCAGAGACGTGATCGGAAAGGTGAGTAATAAGTGTGCTCTCGAGAACAGCGATAACGATGAAGATCAAGGCTGTCAGAGAGCGGTTATTCACTCACTCGTGTATTTATAGATTCAGGCAGAAATCGAAAGACGCCAAAATCATAAATTGAAATCTACAGAGAGAGCAGCTGTCATCAAGGAGATTTATACACCTCTACACCAACATGTTTATCATCTTCAG[G/A]TACTTATGATCAGCAACACGGGCAGTCTGTGATTTATGTCGTCCACTGACTTACTGGAATATAATTTATCATCTCTAGGAATCTTTCTTAGCCCCAGAGCTTTTAGAGATGGTCAAATATTGTGCTTCAAGTGAAGCAAATGTGCAAGGACTGTTGAAACTCATCCAGACAGAGGCAGGTGAGCTGCTGCTTTACACGTGTTCCAATTTATTAATAAGAAGGAAAAATCACATGCTAACTAATTCTGTTTACTGAAAATTTCGCAGCTTCGAGAGTGTTTCGGTTCCAGGTGTTCCGAAAGGAATTCTGCAAGGACCTTCTAGAAGAGCTGGAGCATTTTGAACAGTCGGATGCACCCAAGGGCAGGCCGAACACCATGAACAATTATGGGGTAAAGGTTTTATTATAAAGGTCAAGGACTTTGCAAGAGACACTCACTAAAATATAATTTAGTGTAACACAAATAAATAATAATAAAATATTGTTAGGCTTAAATAAAA
Associated Phenotype:
Not determined