Busch Lab

ZMP

si:dkey-21k4.1

Ensembl ID:
ENSDARG00000056211
ZFIN IDs:
ZDB-GENE-060526-253, ZDB-GENE-061215-54, ZDB-GENE-061215-54
Description:
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 [Source:UniProtKB/Swiss-Prot
Human Orthologue:
OGFOD2
Human Description:
2-oxoglutarate and iron-dependent oxygenase domain containing 2 [Source:HGNC Symbol;Acc:25823]
Mouse Orthologue:
Ogfod2
Mouse Description:
2-oxoglutarate and iron-dependent oxygenase domain containing 2 Gene [Source:MGI Symbol;Acc:MGI:1913

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa17801 Nonsense Available for shipment Available now
sa20432 Splice Site, Nonsense Available for shipment Available now
sa40441 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa17801
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078664 Nonsense 45 345 2 8
ENSDART00000133641 Nonsense 45 345 2 7

The following transcripts of ENSDARG00000056211 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 29686869)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 27442167
GRCz11 5 28042320
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCRWCTGAACTTCGCTGACATTTGCTTAAGAWCCTCAGATCCCTGGGTTG[T/A]GAGTCTGAATCCCAATTCAGAGACGTGATCGGAAAGGTGAGTANNNNATAAGTG
Long Flanking Sequence:
TGCATAGAATAGTTCCACTCATATAGAAGTGAACAATTATTAAAGCTGACGATATAAATCCTATGTTAAATGAGCGAAGCTTTTTGTTTCTCTACGGACACAATTTTGGGTTGTTCCAAAACAATCACATAAGCGTGCGGAGCTCTAAACAGATTGACAGTTCAACCATTCTGGTCATAATGTGTTTTCATTGCCTTTAAAATATTTTAAAAACACAAATCATACATATTAAGTCTGTATAAATGTATAACAGTGTGTTATTTGACTTATAATATACGCCATGGAGAGATTTTACACATGCAGTTGCTTTTTCACAGACAATATTTTTCTTGAAGAATACAAACTTCATGTTCGTTTCGTCTCAGAGAACCAGTTTAGGAAGGACTATCAAAATGTAAGTAATTTACAGCAAGACGGGCTCATGTCTTCATGTTAAACAGTTTGCCAATTCCGTCTGAACTTCGCTGACATTTGCTTAAGATCCTCAGATCCCTGGGTTG[T/A]GAGTCTGAATCCCAATTCAGAGACGTGATCGGAAAGGTGAGTAATAAGTGTGCTCTCGAGAACAGCGATAACGATGAAGATCAAGGCTGTCAGAGAGCGGTTATTCACTCACTCGTGTATTTATAGATTCAGGCAGAAATCGAAAGACGCCAAAATCATAAATTGAAATCTACAGAGAGAGCAGCTGTCATCAAGGAGATTTATACACCTCTACACCAACATGTTTATCATCTTCAGGTACTTATGATCAGCAACACGGGCAGTCTGTGATTTATGTCGTCCACTGACTTACTGGAATATAATTTATCATCTCTAGGAATCTTTCTTAGCCCCAGAGCTTTTAGAGATGGTCAAATATTGTGCTTCAAGTGAAGCAAATGTGCAAGGACTGTTGAAACTCATCCAGACAGAGGCAGGTGAGCTGCTGCTTTACACGTGTTCCAATTTATTAATAAGAAGGAAAAATCACATGCTAACTAATTCTGTTTACTGAAAATTTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20432
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078664 Splice Site, Nonsense 94 345 3 8
ENSDART00000133641 Splice Site, Nonsense 94 345 3 7

The following transcripts of ENSDARG00000056211 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 29687104)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 27442402
GRCz11 5 28042555
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGTCATCAAGGAGATTTATACACCTCTACACCAACATGTTTATCATCTT[C/T]AGGTACTTATGATCAGCAACACGGGCAGTCTGTGATTTATGTCGTCCACT
Long Flanking Sequence:
TGTATAAATGTATAACAGTGTGTTATTTGACTTATAATATACGCCATGGAGAGATTTTACACATGCAGTTGCTTTTTCACAGACAATATTTTTCTTGAAGAATACAAACTTCATGTTCGTTTCGTCTCAGAGAACCAGTTTAGGAAGGACTATCAAAATGTAAGTAATTTACAGCAAGACGGGCTCATGTCTTCATGTTAAACAGTTTGCCAATTCCGTCTGAACTTCGCTGACATTTGCTTAAGATCCTCAGATCCCTGGGTTGTGAGTCTGAATCCCAATTCAGAGACGTGATCGGAAAGGTGAGTAATAAGTGTGCTCTCGAGAACAGCGATAACGATGAAGATCAAGGCTGTCAGAGAGCGGTTATTCACTCACTCGTGTATTTATAGATTCAGGCAGAAATCGAAAGACGCCAAAATCATAAATTGAAATCTACAGAGAGAGCAGCTGTCATCAAGGAGATTTATACACCTCTACACCAACATGTTTATCATCTT[C/T]AGGTACTTATGATCAGCAACACGGGCAGTCTGTGATTTATGTCGTCCACTGACTTACTGGAATATAATTTATCATCTCTAGGAATCTTTCTTAGCCCCAGAGCTTTTAGAGATGGTCAAATATTGTGCTTCAAGTGAAGCAAATGTGCAAGGACTGTTGAAACTCATCCAGACAGAGGCAGGTGAGCTGCTGCTTTACACGTGTTCCAATTTATTAATAAGAAGGAAAAATCACATGCTAACTAATTCTGTTTACTGAAAATTTCGCAGCTTCGAGAGTGTTTCGGTTCCAGGTGTTCCGAAAGGAATTCTGCAAGGACCTTCTAGAAGAGCTGGAGCATTTTGAACAGTCGGATGCACCCAAGGGCAGGCCGAACACCATGAACAATTATGGGGTAAAGGTTTTATTATAAAGGTCAAGGACTTTGCAAGAGACACTCACTAAAATATAATTTAGTGTAACACAAATAAATAATAATAAAATATTGTTAGGCTTAAATA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40441
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078664 Essential Splice Site 94 345 3 8
ENSDART00000133641 Essential Splice Site 94 345 3 7

The following transcripts of ENSDARG00000056211 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 29687107)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 27442405
GRCz11 5 28042558
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCATCAAGGAGATTTATACACCTCTACACCAACATGTTTATCATCTTCAG[G/A]TACTTATGATCAGCAACACGGGCAGTCTGTGATTTATGTCGTCCACTGAC
Long Flanking Sequence:
ATAAATGTATAACAGTGTGTTATTTGACTTATAATATACGCCATGGAGAGATTTTACACATGCAGTTGCTTTTTCACAGACAATATTTTTCTTGAAGAATACAAACTTCATGTTCGTTTCGTCTCAGAGAACCAGTTTAGGAAGGACTATCAAAATGTAAGTAATTTACAGCAAGACGGGCTCATGTCTTCATGTTAAACAGTTTGCCAATTCCGTCTGAACTTCGCTGACATTTGCTTAAGATCCTCAGATCCCTGGGTTGTGAGTCTGAATCCCAATTCAGAGACGTGATCGGAAAGGTGAGTAATAAGTGTGCTCTCGAGAACAGCGATAACGATGAAGATCAAGGCTGTCAGAGAGCGGTTATTCACTCACTCGTGTATTTATAGATTCAGGCAGAAATCGAAAGACGCCAAAATCATAAATTGAAATCTACAGAGAGAGCAGCTGTCATCAAGGAGATTTATACACCTCTACACCAACATGTTTATCATCTTCAG[G/A]TACTTATGATCAGCAACACGGGCAGTCTGTGATTTATGTCGTCCACTGACTTACTGGAATATAATTTATCATCTCTAGGAATCTTTCTTAGCCCCAGAGCTTTTAGAGATGGTCAAATATTGTGCTTCAAGTGAAGCAAATGTGCAAGGACTGTTGAAACTCATCCAGACAGAGGCAGGTGAGCTGCTGCTTTACACGTGTTCCAATTTATTAATAAGAAGGAAAAATCACATGCTAACTAATTCTGTTTACTGAAAATTTCGCAGCTTCGAGAGTGTTTCGGTTCCAGGTGTTCCGAAAGGAATTCTGCAAGGACCTTCTAGAAGAGCTGGAGCATTTTGAACAGTCGGATGCACCCAAGGGCAGGCCGAACACCATGAACAATTATGGGGTAAAGGTTTTATTATAAAGGTCAAGGACTTTGCAAGAGACACTCACTAAAATATAATTTAGTGTAACACAAATAAATAATAATAAAATATTGTTAGGCTTAAATAAAA
Associated Phenotype:
Not determined