Busch Lab

ZMP

ncam1a

Ensembl ID:
ENSDARG00000056181
ZFIN ID:
ZDB-GENE-990415-31
Description:
neural cell adhesion molecule 1 [Source:RefSeq peptide;Acc:NP_571277]
Human Orthologue:
NCAM1
Human Description:
neural cell adhesion molecule 1 [Source:HGNC Symbol;Acc:7656]
Mouse Orthologue:
Ncam1
Mouse Description:
neural cell adhesion molecule 1 Gene [Source:MGI Symbol;Acc:MGI:97281]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa1470 Nonsense Available for shipment Available now
sa23936 Essential Splice Site Available for shipment Available now
sa17923 Nonsense Available for shipment Available now
sa37307 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa1470
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017229 Nonsense 124 837 4 18
ENSDART00000101117 Nonsense 113 288 4 7

The following transcripts of ENSDARG00000056181 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 21 (position 22750981)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 23436655
GRCz11 21 23473260
KASP Assay ID:
554-1395.1 (used for ordering genotyping assays)
KASP Sequence:
TTCAAATGTCTTTTTCAGAGAAACTCACTTTTCAATATGCTCCATCGCCT[C/T]AAGAGTTCAACGAGGGTGATGATGCTGACATCATCTGTGATGTCATCAGC
Long Flanking Sequence:
TTATTATTTGCAATCTTCGAAAAGCCTTTAGGAAAATCCTATAGGGTTTTATCGAGGGAACCAGTTTTATGCTAGCAGCAGATTAGCCTACAAGGTGACATCATAGTTTCTCACTCTACACTGTTGTTGTATTTAATTATGCTGTTCTGACCAATGTATGCAAGTAGAACTAGAAATGTTATATCAAATTAAATTAGTTAAATTATACATTCTATTAAACTATTAAATTAATTTTTTATTTAATTTGTAATGATATCCTTATTTATTTTATTTGACTATTTATAAATTTAAGGCATTTTAATTATAAATATACCTAATGGGGGTTGACATTTCTCCGAATTAATTAATTTTTCGTTCTGAAATCCTCAATTTCATATTCACTTTTGCTACTTGAGCTTTAAGTGAGGGATTTTTGCAAAAGTAATACAAGATAATCTCTTACAAGAAGATTTCAAATGTCTTTTTCAGAGAAACTCACTTTTCAATATGCTCCATCGCCT[C/T]AAGAGTTCAACGAGGGTGATGATGCTGACATCATCTGTGATGTCATCAGCTCACCACCCCCAACTATCATCTGGAGGTATAAAAAGATGAGAATCCAGCCTGAGACTGATGGTAAGATGTGCAGTATTACTGTCAGATCTACTTCGCTTTATTTATTTATTTATTTATTTATTTATTTCCCTTTTCAAGTAGCTACTGTTTTGACTTTAAATAATTCCTGTCAAAACCCTCCAGTAACACGTGTAAGCTCTCTTAGCATTGTCACAATAAAATCAGTGACAGGGAAGCACCTGAATATTAATTGAGAACTCTGTGTACTCAAAGTATGATGGTGTTTTCATCTGAGCTGTTTTGTTTGTGAGTTCAAGGCTCATTTGGATGAAACTATTTTAACCTCAGAGGGCTCCTCCCTCAGAGACCGCTGGAAGAACCGGCAACCGCAGATCTCTGCTGTGAGACGTGAACTCGCAGAGATTTTCACTGCAAAACCACTAATTGTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa23936
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017229 Essential Splice Site 300 837 7 18
ENSDART00000101117 None None 288 None 7

The following transcripts of ENSDARG00000056181 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 21 (position 22744717)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 23430391
GRCz11 21 23466996
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAAACAAGGCTGGAGAGAGGAGTGAAGAAGTCACGCTCAATGTGTTTGG[T/C]AAGCTAAAGAAAAGCTATGTCACATGTTACATGGGCCACCAAATAAACTT
Long Flanking Sequence:
CATCGCAGGGAAACACAGCGCACAGCATTCTTCCCAACAAAAAAGCCCATCAGCTTGATGTTTATGGCCCTCAGATATTATTTACAGCTTTTATATTGGCTGCAAGACAGGAACGTGTCAAGAAACCCAAGATGACAAAGCAGATCTGCCGTTTATTTCGTGGACTATCAGCGTCACGAGAAGCTGTGCACTGCAGGATGAAGAATCCATTACATGGCCAGGCACACTTTCTCTCTGTGTTTTCTAGTCGAGATGAGACATCATGTATTCATGACTTCAGAGAGAAAGTAACAGCTCCAAGGCCAAACAGTAAACCTATCCTCTCTTCTTTCCTGCAGAGGTAATACGGAGCTGGAATCAGATGAGAAGTACAGTCTAAATGAAGATGGGTCGGAGCTGACCATCAAAGACGTCAATAAGCTTGATGAGGGAGATTACAAGTGCATCGCTAGAAACAAGGCTGGAGAGAGGAGTGAAGAAGTCACGCTCAATGTGTTTGG[T/C]AAGCTAAAGAAAAGCTATGTCACATGTTACATGGGCCACCAAATAAACTTTCATGTTTTAAGTTAATCAATTTAAGATCAATTATTGTGATTTGGTGATTATTAAGGCATGAAATGTTGCAAAATTAAAGGAATGATGTGTTTGAACTACATGGTATGCACTGAATGTCATCTATAATGACATCTACTGTATGCAAAGGGCCAATCCTGTTGTATTTTCAGCATTGCAGAGTGAAATTACTAAAAACCAGAACTCTAAATTAAGTCATAAACAATGAATGTGACCCAGGGCTTAATTTGTGCTGGAACACGTAGGATCTGGATCCATCACCTCTGAAATCTGATCCAGCACCTCATTTTACCGACCCCCCTGCTCAACTGCCCTCCTCCCCCATCCGCTGTTCACACTCACTTTCTTCTGCGACTCCCCAACTCTTCACTTTCGTCCACGATACCCCCACCTGGTCACTATCATCCGCGACACCCTTCTGCCATCTACTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17923
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017229 Nonsense 301 837 8 18
ENSDART00000101117 None None 288 None 7

The following transcripts of ENSDARG00000056181 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 21 (position 22741933)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 23427607
GRCz11 21 23464212
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTTTGTGGTGTGTGTTTWAAGTGTYGTGTTTTTCTGCGAACCAACAGTG[C/T]AACCTAAGATCACCTTCCTAGAAAACCAGACGGCATCTGAGTTGGAGGAG
Long Flanking Sequence:
CTAAAAATTCTAATGTTCTTATTTATAGCTTAAGTACACCATTGAACCTGAAAGCTACTGCTTTTTATGCCTTTGTTCTTTAGCACGATATCCAATTTGCATGAATATAAGATTTTAAATGTTTATGTCGCAGTTCAAAACACAATCACAATATTTTTCTTCTCATCATTCCTACGTTTTCTCCAGCCACCATTGGCGCTACTTCAGAGCACTTAGATTAGAGCTGCGGCAAATAAAAGTAAATCAAAGCGCTACTCCATCACATCCATTAAACAAAGTTCCTCTTTTGAATTATAAAATATAACAATGTGTTGATTAAATATTGAAAGCTCCCAGCCAGTGAGGCACTCTCATCTCATCAACTTAAGAGCACTGTTTTGGTATTATGACCATTATAAAGGCCTAGTAATTGCACAGTGGAGAATAATTCTTTTTTTCCCCTAAGGAGAGTGTTTGTGGTGTGTGTTTTAAGTGTTGTGTTTTTCTGCGAACCAACAGTG[C/T]AACCTAAGATCACCTTCCTAGAAAACCAGACGGCATCTGAGTTGGAGGAGCAGATCACGTTGACTTGTGAGGCGACGGGTGATCCAACACCTAACATCATCTGGAGCTTCGGCCGCCGTGTCTTCACCGAAAATGAACAGGTGATGGGGTTTAGGGATCAGGGGTCACTGGGTGCTTAAAGGGGTCCTATTATGCTCCTTTTTGTAAGTTGTAAAAATAAGTTGTTAGTATGTCCAGAACGTTTCTGTGAAGACTAATCTTGAAATAATCTACAGATTACTTGTTATAGCTTGTCAAATTTGCCGCTATTTGTGTGTGAGCAAAAATGCTCTGTTTTTGTGAGTGTGCCTTTAAATGCAAAGATATAAATATATATATAAATATATATATATATAAAAAGAAAGTTACTAGCATGTGATTTTTCATGTTTTCAGGTTGATATATGCACCTAGGTCTTGATTATAGAAGCTTAAATGTAAAAAAAAAAAAAAAAAAAAAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa37307
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017229 Nonsense 527 837 12 18
ENSDART00000101117 None None 288 None 7

The following transcripts of ENSDARG00000056181 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 21 (position 22693628)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 23379302
GRCz11 21 23415907
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATAGAGTTTGAGGAGCCTGCTTCCAGTGGAGGAGTGCCTGTTCTGAAGTA[C/A]AAAGCTGAATGGAGGATAGCAGGCCAAGACTGGACTGACCGAGAGTATGA
Long Flanking Sequence:
TTGGTATCTTATCTCTGCAGGTTACAAAAGTTCAAAACAAGACATTTTTTGATGGCTTAGTTCCTATAGATTTTTGTTTCTAAAAGTTACAATATGTTTTCATAGCACATCAAACTCTTATTTCCGAAGTTCAAGGAAAATTTGATTCCTCCTGATATGACCACTTTAAACAATATCTTGGTTTGTCTGAAAGATATTTTACTTGTGCTTCAGGGAAAAACTGTACTGGCCACTGCAATAACAGTTCCCTCGGTGAACCATTCCCCAAGCCCATAACAATTTTTCATTGTTTCAGTTTGTCTATTGCCTCACTCACATATTTGTGGCGCTCTGCTTGTGTGCACAGAGCAGTTTGCTGTCTATATTTCAGTGTGTGTGTGTGTGTGTTTTGTAGATGTGCCTTCGGCCCCCTCTATCGAGCGTGTGGAGCCGTATTCCAGCACAGCAATGATAGAGTTTGAGGAGCCTGCTTCCAGTGGAGGAGTGCCTGTTCTGAAGTA[C/A]AAAGCTGAATGGAGGATAGCAGGCCAAGACTGGACTGACCGAGAGTATGAACTTGAGGATGGTAAGCATCCAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACATGTGCGTTCTGCTGTAATAACATTTATTCAGAAATGGAAGCAATGAAGAGAGAAAACAAGATAAATGAGGCTTTTGGGAGGCTATAAAAGCTTTTCTTCAGTTGTGTGAAGGTCAAGCTCGTGTTTTCATTGCGTTGTTTCATAGCGAAATGACCACTGATTCTCCGATGATTGTATTAGAATGGGGATTTTAACTGAGTTACATTGTTTTAGCGCAAGGGCTTTTTAAAAACATTGTCCTAAAGTGGTTGTGATGTGGCAGGATTCCAGCAACATGCAATTTATTCTGTCTGTGCCGAAAGCAAAAATACTGTGAAATAAAACCACAGCAAGTCAGAGGAGGGTGTTTGTGTACACTTCT
Associated Phenotype:
Not determined