ZMP
si:dkey-159a18.1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate sortilin 1 (SORT1) [Source:UniProtKB/TrEMBL;Acc:Q5RGI7]
Human Orthologue:
SORT1
Human Description:
sortilin 1 [Source:HGNC Symbol;Acc:11186]
Mouse Orthologue:
Sort1
Mouse Description:
sortilin 1 Gene [Source:MGI Symbol;Acc:MGI:1338015]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa20265 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa20265
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000078587 | Essential Splice Site | 762 | 805 | 20 | 21 |
| ENSDART00000134528 | None | None | 279 | None | 6 |
Genomic Location (Zv9):
Chromosome 4 (position 19046097)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 20122703 |
| GRCz11 | 4 | 20111679 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTCTGTATATTACATACTAAAGATTTCTCGTCAACTTCTGCCTCCTGCA[G/A]GTCGCCGGAATATAACTTTTCTGTTCTGCAAATCCAAGAAGACGACCTGT
Long Flanking Sequence:
GTACACATATTACACTGTTATAATAATAAATTTTTTATAGATATCGCAGGATTCCCGGAGATAAATGTAAGGGGAGTTTCAGCCCTCCAAGAAATGAAGAGGCTCACCAAAAGCTTTGTGGGAATGTCACTTCCTCAGATTCACATACAGAGATACCAGTGAGTGGTCCATTTCTCATAAGAATAATAAGTTACTATACAGTGGCCAAAAAAACACAGATATTCATTGTTGTGTAGAGAATAAAATTAATCCAATAAAGGAATTTTTTGTCTTATGATTTGCAGCCAGCCATACTGGCTCTTATAGTGGTGTGTAGTTTGGGCATCATTTGTTTGGTTATTATAGCAGCTTACATGATCACTTCAAGAAGAATAAACTGTGGCCAAAGGTAAGGTCATTTGATAAAGCCTTGTCCAGCTTTTGTTTTATGTTACATCCATTTGAAACTATTGTCTGTATATTACATACTAAAGATTTCTCGTCAACTTCTGCCTCCTGCA[G/A]GTCGCCGGAATATAACTTTTCTGTTCTGCAAATCCAAGAAGACGACCTGTCCGTTAACAATGAAAGCACCCCCAATGGCAAACTAAACGGTTTCCAGGTCCAGGAGGACTCAGATGATGTGAGCTTGATCAAACAATAATATCATGCCTCCATTTAGTTAATGGCTATTGTAATAATTAACCTAAAAACCTACTTAATCTTCTTACACTCGTTATTCCAACCTTTGTGCTTTGTTTTTTATTTTGTAGGAAGTACTTTTTTAAAAATAATTTATTGCATTTGTTTGCTTTTATTTTTCTCTATTTTTCTTTCTTTCTTTTTTCTTTTCTTTTTTGGTCTTCTTTAGGATCTCCTTGAATGAACAACATTTAAACTGTGGAAACTACTCAGGCTTTGAAAACAGGTGTTTGCAGGCAGATATGCTTCAAATAAATTTCAAGCCTAGTCACTGTAACTGGAAGATAAAACACCTGAAAATAATAGTGAACTGCATTTATCAA
Associated Phenotype:
Not determined