Busch Lab

ZMP

npas4

Ensembl ID:
ENSDARG00000055752
ZFIN ID:
ZDB-GENE-060616-396
Description:
Neuronal PAS domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q1ECW2]
Human Orthologue:
NPAS4
Human Description:
neuronal PAS domain protein 4 [Source:HGNC Symbol;Acc:18983]
Mouse Orthologue:
Npas4
Mouse Description:
neuronal PAS domain protein 4 Gene [Source:MGI Symbol;Acc:MGI:2664186]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa701 Nonsense Available for shipment Available now
sa16063 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa701
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078154 Nonsense 6 933 1 8
Genomic Location (Zv9):
Chromosome 14 (position 31512132)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 30302189
GRCz11 14 30642503
KASP Assay ID:
554-0609.1 (used for ordering genotyping assays)
KASP Sequence:
AAGCTCAGAAAYAGTTTTCATCGTWGCTATCCACAATGTAYCGGTCCACT[A/T]AAGGAGCCTCGAAAGCTCGAAGGGACCAAATAAATGCGGAAATTAGGAAC
Long Flanking Sequence:
TCAGCATTGCTCGCACTGATATGAGACGTATAAATCCCTCTTGGCCCCCCTTTACTCCATCCCCCCTCCCCTCGCGCTTTTTTTACGTCGGTGTTGGCGCGTTGGGAGCCCCCCTGCTCTGGTGGAGCCCCAGCCTATATAAGTTACCGGCTTGCAATGTTACTCCACCAGATTTACGGACTCCCTATATCTGGGCGAGACACGGCTTCAGCAGCAGCCGACTGACTCAATCCCCAACCTGGAGGAAAGAACCATCTATCCTCCGGTCCCCGCAACCTGAGCCAGGCGCTGTGGCGGAACCGAAGGGGGAAACCCGGGAGAGGCAGGCGAATGGAGAACAGCCGAACTCTGGACATGTGCTGAGATGACACACCTGTGAACGCGCCTAAACTCTTTTGGGAAAGAGCCTAACACTTTTCTTAACTTGCAAGGCAGTCCACTTATTCAGCAAAGCTCAGAAACAGTTTTCATCGTTGCTATCCACAATGTATCGGTCCACT[A/T]AAGGAGCCTCGAAAGCTCGAAGGGACCAAATAAATGCGGAAATTAGGAACCTGAAGGACTTGTTGCCCATCTCCGATGCGGACAAGTCTCGGCTCTCCTACCTGCATATCATGTCGCTGGCGTGCATGTACACGAGAAAGTCTGTCTTCTTCAGTCAAGGTAAATATTTAAATATGTCTTAAAAATGTATAAAATCGAATAGAAGTGTGTAATCCTTAAAATATGAACTTTATAGACGCTTTATAGATCTGCGTTTGTGTTGAAGCATTCATGTACATCGCGTTCTTTATTTATTGAGTTGATGCAACAGGTGCATGTTTTTTTTGTAATATCTACACTGCATATTCGAATGATGATACAAATTGAAAAATATCCTTAAAAACGTACTGAAAACTGAAATTGAAACGTAATGAAAGTGCTTTAAACCGCCAATTCTCTCCATGGTGCTGAAACACAAACGCTGTCCATGGTGCTGAATTGTAAATCTCGCTACCGCGTTC
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
whole organism
ZFA:0001094
quality
PATO:0000001
normal
PATO:0000461

Mutation Details

Allele Name:
sa16063
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078154 Nonsense 635 933 7 8
Genomic Location (Zv9):
Chromosome 14 (position 31509233)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 30299290
GRCz11 14 30639604
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GRAGTTCGGGGTCCRCTATACGTGGACGTCCCTCACGGGCCGCTCCCTTA[C/A]CCACCAGAAGGTCTCCTAACACCAGAAGCCTCACCTGGAAAACAGCCAAG
Long Flanking Sequence:
ATTTTGCTGCCACCGGCATTCCAGATAGATCCTCCTTTGCCAGTCCTGCCCCTTCCTCTTCCACCTGTGCCTACCTCCCAGGCACAACAGACCAAAGAGTTTGTGTGCACACCCCCATACACACCTCAGCTAGGTGGAAGCAATTTCCCCTTCGGGGAACCTCACTTTAGCTTTGATCCCACTGGAGCCACCTCACCACCTCCACTTGGTCAAACCGCAACAGTAACAACGACAACAGCACCATCTCTTTCTCCATCCGCGCCATCAAACCCACAAAGCAGCCCACCACCTCCAACAACAACACTCTCATCTCTTTTGCCACTCACGATAACATCTCCAACCACAGAGATTCTCTTTCCAGTGGAGCCGTGTAGTGGGTCACTCTATGAGAAACTCCCTCCTACTCCTGACAGTCCTGGTGACGGTGACTGCACAGTCATGACTTTACCTGAAGTTCGGGGTCCGCTATACGTGGACGTCCCTCACGGGCCGCTCCCTTA[C/A]CCACCAGAAGGTCTCCTAACACCAGAAGCCTCACCTGGAAAACAGCCAAGTCTGCCCTTCTTCTCCTCACTGCGTGACAGAGAAAAGGAGAGAACGGAGATCTCGCTTTTAGCACAGCACATCAGTACACTAGCAGAGGGCTTCTACCTAGATCCACTCCTGGCCAAGCTGGTCCCGTCCACCCTTTCTGAACACTCTCAGTCTCCGGACTCTGATGGACTTGATTCAATTCCACTGCTGGGTGAATTCTACCCACTCAAGTCCTGGAAAGGCTTGGACCTGCCCATCTTCCAGGATGACGAGTCGCTGTTCGAGGAGAGTGTCTTAGAGACCCTTCTCCAGGACCTCTCATCCTCCCCTCCGCTCTCACCGACTCCCTCTTCCTCCTCTCACTCTAGCCCCCCCTCTTCTCCCTCCACTCCTGAGTGCTGGTGTCCATCCTTGCACTTTGACGGGGTCTCTGCTGTGAGTGCCGGTCACTTCTGTAGCGTCCAATCGGC
Associated Phenotype:
Not determined