ZMP

six3b

Ensembl ID:

ENSDARG00000054879

ZFIN ID:

ZDB-GENE-990415-128

Description:

sine oculis homeobox homolog 3b [Source:RefSeq peptide;Acc:NP_571438]

Human Orthologue:

SIX3

Human Description:

SIX homeobox 3 [Source:HGNC Symbol;Acc:10889]

Mouse Orthologue:

Six3

Mouse Description:

sine oculis-related homeobox 3 homolog (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:102764]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa24913	Nonsense	Mutation detected in F1 DNA	Not yet available
sa35303	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa24913

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000077157	Nonsense	32	293	1	2

Genomic Location (Zv9):

Chromosome 12 (position 27128630)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	25509618
GRCz11	12	25600978

KASP Assay ID:

554-7607.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TCCTGCCCAATTTCGCGGATCGCCCTCTGCTTCTGGCGGGCAGCATTCCC[A/T]GAGCGAGGTCCCCGGAGGACTTACCGATGTTTCAGCTGCCCACCCTAAAC

Long Flanking Sequence:

CCCACTCGAGGAAGCAAATTCGCAGAAATACAGCAATATTCCACCTATTAATCCTCCTACCGTCGAGCGAACTGGCGCACCATTCGCCTGCTTGAAAACATCCCGCAGTGAGTGGCCAGTTCTGATTGGAGCGACGATAAAACCCTGCGCGCAAAGCAAATGTGTGGAAGGGCAGCGCGCACTGGCTAATGACGGGCAAGCTTGACAGTGATTGGCAGGGCTGCCATGACAACCACAGCACGACACCAGGAAGACCAATAGAAAAGCGAAACAAAATGTTTCACCGTTGCACTCTAAGTTGATTAAGGGTAGATATTCGCGCTCGGTGGCACTGCGGCGATAGCAGCGCAAACACGACGTCGGGTTTTCCGTCTTTCCCCGTCGTTTTGTCTCTGTCCGGCGACTCCATGGTTTTCAGGTCTCCTTTAGAGCTTTATCCCTCACATCTTTTCCTGCCCAATTTCGCGGATCGCCCTCTGCTTCTGGCGGGCAGCATTCCC[A/T]GAGCGAGGTCCCCGGAGGACTTACCGATGTTTCAGCTGCCCACCCTAAACTTCTCGGCGGAACAGGTGGCCAGCGTGTGCGAGACGCTGGAGGAAACCGGGGACATCGAGAGGCTCGGACGTTTCCTTTGGTCGTTGCCCGTAGCACCCGGAGCCTGCGATGCCATCAACAAGCACGAGTCCATCCAGCGAGCCCGAGCGGTGGTCGCGTATCACACGGGAAGCTTCCGTGAATTATACCACATCCTGGAAACCCACAAGTTCACCAAAGACTCTCATGGAAAGCTGCAAGCGATGTGGCTGGAAGCGCACTACCAAGAAGCAGAGAAGCTGCGCGGCCGTCCCCTTGGACCCGTTGATAAATACCGGGTCCGCAAGAAGTTTCCTTTGCCACGGACCATCTGGGATGGCGAACAGAAGACGCACTGTTTCAAGGAACGAACTCGCGGTTTGTTGAGGGAGTGGTACCTACAGGACCCTTACCCCAATCCGAGCAAGAAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa35303

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000077157	Nonsense	255	293	2	2

Genomic Location (Zv9):

Chromosome 12 (position 27130198)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	25511186
GRCz11	12	25602546

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCAAAGCAGTCTGCGCTCCATGTCAGAATCGGGCTGCACACCGCACAGCT[C/A]GGCAGAATCCCCGTGCGCGGCCGCCAGTCCCACGACCAGCGTCTCCAGTA

Long Flanking Sequence:

TATATATATATATATATATATATATATATATATATATATGTGTGTATATATGTATGTATATTTTTTATAATAACGACAATACTACATTAAAAGTAATGTTAATATATATATGAAATTAAACGTTTTAAAGTGTGTAAATGTTTTGTTCTCAAATAACAAAAAAAATTATATATTTTGATGTAGAGAAATTATAAGTTTATAAAATATATGGGCCTAGGCTTGTATATAAATATGAATAATTTTACCATTGGCTTAAGCTAGTACCCTAACTGCATTTTTACTCCTCTAATTTAACAGATGTTTCAGGTTTATTATTAGTCACTTCAACCCGTCGAGCTCAAAGAAGATGCTACTACTTCAGTTTATCAAGTCTGTATAAATGATTACCACATTGCATAATTAACCCTTGTTATTAATTCTTGCTTTTAGGCTTCAGCATCACGGACTGGGCCAAAGCAGTCTGCGCTCCATGTCAGAATCGGGCTGCACACCGCACAGCT[C/A]GGCAGAATCCCCGTGCGCGGCCGCCAGTCCCACGACCAGCGTCTCCAGTATGAATGAACGAGGCGACGGTGGGACAATTCTCTCAGTTACAGACAGTGACTCTGATTTCGATGTATGATGCACCGTCGGACAAATATAAAACATTTTTTTGCCCAGAGAAAAATGAACTTGTGAAAATGTGGGCAACATGGGGGCCGGCCATTTTGCCAGCTTGTGTTCAACAAAAGGAGAAAAGCATGCTGTTTTTCCAGCGCTTCAACGGACTGACGCCCTTACCTTTTTATTTCCAAGGCCTATACACGACCATTTTGCATGTTCATTTGTGAATATTTTGCAATTTTAAAAGGCATTTATGAAGTGGAGTCCGAAAAGGTAGAACTCGATGCTCGATGAAATGAGTGAACCGGAGAGGCAATTTTATTATTTTGTGTTTATCAGACAATCGTTGAAGTCCAAAAGCACCTTTATTCCCCCTCGTCTTTTACTCGACTGGAGATGTT

Associated Phenotype:

Not determined