Busch Lab

ZMP

fras1

Ensembl ID:
ENSDARG00000054619
ZFIN ID:
ZDB-GENE-060526-68
Description:
extracellular matrix protein FRAS1 [Source:RefSeq peptide;Acc:NP_001124312]
Human Orthologue:
FRAS1
Human Description:
Fraser syndrome 1 [Source:HGNC Symbol;Acc:19185]
Mouse Orthologue:
Fras1
Mouse Description:
Fraser syndrome 1 homolog (human) Gene [Source:MGI Symbol;Acc:MGI:2385368]

Alleles

There are 15 alleles of this gene:

Allele Name Consequence Status Availability
sa33662 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa17510 Nonsense Available for shipment Available now
sa40517 Nonsense Mutation detected in F1 DNA Not yet available
sa26535 Nonsense Mutation detected in F1 DNA Not yet available
sa20491 Nonsense Available for shipment Available now
sa33663 Nonsense Mutation detected in F1 DNA Not yet available
sa33664 Nonsense Mutation detected in F1 DNA Not yet available
sa14516 Nonsense Available for shipment Available now
sa45217 Nonsense Mutation detected in F1 DNA Not yet available
sa20492 Nonsense Available for shipment Available now
sa20493 Nonsense Available for shipment Available now
sa25308 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa33662
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 None None 3970 None 72
ENSDART00000097856 Essential Splice Site 347 3989 10 74
ENSDART00000137112 None None 3936 None 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40535658)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38335048
GRCz11 5 38935201
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTTGTCCATTTAGGGGCAGAAAGCCATCAAGAGTTTTAGACGTCTCTCT[G/T]TAAGTAAACATAAACATGGTTTGCAAGATCAATAGACTCTGTTAAATCAG
Long Flanking Sequence:
AAATAGTTCCTCTTACAAAAGGGTTCTGAGACTTGTGCTTGATTTTCTCTTTTATACACATGATTATTTCAAACTATTGTATAAGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTATATATATACACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATGTATACATACAATTATTTTTAAATATAAAACAATTTTATAATGTATCATGTCACTTTTGATTAATTAAATGTGTCTTTGTTGATTAAATTAATCAATAATAGTTTCATAAGAAACTCAACACAAGCCTTTGAACTGTAGTGCTTTTGATAGTGATGAAGAGCGCCATGCAAAATCAATACCACAATCAATCAGTCTGACTGTCTTTGTCCATTTAGGGGCAGAAAGCCATCAAGAGTTTTAGACGTCTCTCT[G/T]TAAGTAAACATAAACATGGTTTGCAAGATCAATAGACTCTGTTAAATCAGATTTTTGTCTAAGATAAATTGTGTGTTTGTGTTTTTGTCTTTCGTCGTTCTCAGAATCTAGAGATTGTCAGAGAAGGGTTGTGTCGAGAGTGCCAGTGTCAAGAGGGTCACGTGACCTGCTACCAGCACTCCTGTCCCACCTGTCCACTGGGAACACTAACTATACCTCACCGGGAGCAGTGCTGTCCCGACTGCAATCCAGGTGAGGAGACCTGCATCCATGTTTGTGCCTAACAGCAATGATGTAAGAAGCTACCATATTTAGGCAAGGCAAGTTTATTTGTATAGCACATTTCATACACACTAGTAATTTAAAGTGCTTTACATCAACAGGATTAAAGAAGATAGGTATACAAGAAAATAAAAGTGTCAAAAACTATTAAAAGCAGATAAAAGCAGATTAACATGTGCTAAAACAGATAATAAAAGAAATGATCTGAGTGATCTGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17510
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 537 3970 14 72
ENSDART00000097856 Nonsense 548 3989 15 74
ENSDART00000137112 Nonsense 503 3936 13 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40557425)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38356815
GRCz11 5 38956968
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GATATTTGATTTATTTATTTGTAGCTTGTGACCCTTCCTGTGCAACCTGC[C/T]AACCTGACAGCCCCAGCTGTATGAGCTGCCCTGCAGAACAWGCACTGCAT
Long Flanking Sequence:
ACCATTCCTTGTACTGTAATGACAAAGCCTGCTTCCCAAACATCCCCCTGTCAACACTACAGCAAATGCAGAATGACACTCTACATGTCTTCTTTATAGTGGAGAACTTAAGCTGCCACACATCCAGCTTGTCTGTTTATCAGAAGTAGAAGTGTGCTGATGGGAGTTTGTTGGGTTTCTGACTGTGGGTAAAAATAGCTTGTGGTTTGAGCATTTATACTGTATTTTGTATTGATATGCTGACTTGAAGGTTCTTAGGCTTTTCTATATTTGTTTGTTCTATTTTTAATTGAGGTTTCTCATAAGTGTTTCTCACAAAACCTCAAATTATTTTAGTCATATGAGGTTATACTAAATTAAAAAATAAAGAAATCTTGTAAAACACGTTTCTATAAAAATAAAAGTGCGTTTTATTTACAGCATTGCAGTGTAGCTGTTTTATTTATATCAGATATTTGATTTATTTATTTGTAGCTTGTGACCCTTCCTGTGCAACCTGC[C/T]AACCTGACAGCCCCAGCTGTATGAGCTGCCCTGCAGAACATGCACTGCATCAAGGGAAATGTGCACCACAATGTCCAGCGCAGTATTACAAGGATGACCACGGCCGATGCCAAGGTGAAAAATTATCTATTACTGTTTTTATATTTTGTGCAACACGTAGGCTTACTGGCAACCAGAGGCTCATAAATCTCTTTTGTAGCGAATTGAAAACATATTCTTCATTCTGAAACCCATTTTCTCTGCCAGAGACGCTGCTTTGGAAAGTTTCCCTGTCATTTGGACTCGATCCGTTGAAATGTCTTACCTAGGTTTTTTCCGCAAAACCGCAGGGCCTAGAAAATGATCATTGTAGTGCTATGCTCGATTAATTTTAAAATCACATTTAATACCCTGTCAAAACCTAATCCTGTGGTGTTTAGTCAATTAGCATTTTTTTTGCCAGGCACCTTTATCCTTCTAGCTGATAAAAACAGCATAGAGTGCAGTAGCTAGAAAATGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40517
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 543 3970 14 72
ENSDART00000097856 Nonsense 554 3989 15 74
ENSDART00000137112 Nonsense 509 3936 13 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40557445)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38356835
GRCz11 5 38956988
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTAGCTTGTGACCCTTCCTGTGCAACCTGCCAACCTGACAGCCCCAGCTG[T/A]ATGAGCTGCCCTGCAGAACATGCACTGCATCAAGGGAAATGTGCACCACA
Long Flanking Sequence:
GACAAAGCCTGCTTCCCAAACATCCCCCTGTCAACACTACAGCAAATGCAGAATGACACTCTACATGTCTTCTTTATAGTGGAGAACTTAAGCTGCCACACATCCAGCTTGTCTGTTTATCAGAAGTAGAAGTGTGCTGATGGGAGTTTGTTGGGTTTCTGACTGTGGGTAAAAATAGCTTGTGGTTTGAGCATTTATACTGTATTTTGTATTGATATGCTGACTTGAAGGTTCTTAGGCTTTTCTATATTTGTTTGTTCTATTTTTAATTGAGGTTTCTCATAAGTGTTTCTCACAAAACCTCAAATTATTTTAGTCATATGAGGTTATACTAAATTAAAAAATAAAGAAATCTTGTAAAACACGTTTCTATAAAAATAAAAGTGCGTTTTATTTACAGCATTGCAGTGTAGCTGTTTTATTTATATCAGATATTTGATTTATTTATTTGTAGCTTGTGACCCTTCCTGTGCAACCTGCCAACCTGACAGCCCCAGCTG[T/A]ATGAGCTGCCCTGCAGAACATGCACTGCATCAAGGGAAATGTGCACCACAATGTCCAGCGCAGTATTACAAGGATGACCACGGCCGATGCCAAGGTGAAAAATTATCTATTACTGTTTTTATATTTTGTGCAACACGTAGGCTTACTGGCAACCAGAGGCTCATAAATCTCTTTTGTAGCGAATTGAAAACATATTCTTCATTCTGAAACCCATTTTCTCTGCCAGAGACGCTGCTTTGGAAAGTTTCCCTGTCATTTGGACTCGATCCGTTGAAATGTCTTACCTAGGTTTTTTCCGCAAAACCGCAGGGCCTAGAAAATGATCATTGTAGTGCTATGCTCGATTAATTTTAAAATCACATTTAATACCCTGTCAAAACCTAATCCTGTGGTGTTTAGTCAATTAGCATTTTTTTTGCCAGGCACCTTTATCCTTCTAGCTGATAAAAACAGCATAGAGTGCAGTAGCTAGAAAATGAAATGCAATCAATTGTTTTGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa26535
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 1265 3970 27 72
ENSDART00000097856 Nonsense 1278 3989 28 74
ENSDART00000137112 Nonsense 1231 3936 26 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40603025)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38402415
GRCz11 5 39002568
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGGCGAGCAGCTGCAGTATGTTCATGATCGTTCAGATGGAGACCAGGAC[A/T]GACTTCTGCTGCAGGTCAATGACGGACACAGCTACCAGAACGTCCTGTTC
Long Flanking Sequence:
TGTAATACAGACTAAATGCTATTGGCTGTTTTTGAAATGGGGATGAGCTACTATGTCCCACCTTGTTGTCTTGTTTCAGTTGTGATAATGTCAAACATCAAATAAAACAGAATTCATATTCTCCTCTCTGTACACCATAAAAATCTAAAATATGCTGATGTAAAAGAACATAGAATAAGGGCATTCAATAATAAACGTATAGATACTTTTTTTCTGAGTATTGTCCTGTAATTTGTTTACTCTTTCCACAGCCACCCACTGTAATCACCAACCAAATCCTGTACATTAACTCTGGCGAGACAGCCGTCATCAGCAGATCTATTCTACACATCAGCGACCTTGACAATCCTCAGGACGTGTTCATCACGGTTCTGGATCCACCTCAGCACGGTCGCCTGACATACATGCACAGTGATACGCAGGTCACCCATTTTAAACTGGAAGAGCTAGATGGCGAGCAGCTGCAGTATGTTCATGATCGTTCAGATGGAGACCAGGAC[A/T]GACTTCTGCTGCAGGTCAATGACGGACACAGCTACCAGAACGTCCTGTTCCACATCAGCATTGAACAGAAGGTATGACATGACAGCTTTGAGTCTGAAAAAAAAAACTTAATGAATAACTGATTAAAATTAAATTGATCTGAAACTGTTTTTATCAGCCTTTTGTGAGGTGTTATTCTGTCCTGGTTAAATTCTTTGAAATGCTAATTGCTTTGTTTTTTTAAATGTTCCCCTAATTGATCATGTATAATTATTCATCTGATAGGAGTATTTGATTTGTTCTTTAAAAGTCTCATTTTTTATCTGTTAGCTATACATTAGATGCCTTATGAAAATTTATAGGTCTATCAATGTGTCATGTACATTCACATTGATGTAAAAAATACGAAGTGTGAGAAACAGCAGGCCATGATCTCATCTGAATTTTGGATTTAGATCAAGGTTTTTTATTATTATTATTGGCTAATTATGGATTCCTGCACTTCGCCTGATTCTGAAGAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20491
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 1394 3970 29 72
ENSDART00000097856 Nonsense 1406 3989 31 74
ENSDART00000137112 Nonsense 1360 3936 28 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40613255)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38412645
GRCz11 5 39012798
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGTAAATGAAGGCACTGTCTGGTACCGACATTATGGATCTGGAACACAG[A/T]GAGACACTTTTCAGTTTCAGGTGAGACATGAATAGATTTAACCCAAGGCA
Long Flanking Sequence:
AGATAGGTCTTTTACACTGACACAGACGCAGCGTTAATAATGATGATGATGTTTTATGCTTTCTCTGTAGGTTGGATTGACTCCGCACCTGCGTTCAGTGCCCAAAACTTGGGTGAAGGAGGGAGGAATGGTGCAGCTTTCTAAAAAGTGTCTCAATGCTCAATTCAAAGGAGCCAGTGACTCTGAGATCCTGTACAGCATCCATTCTGAGAGCGGACAGCCCAAATACGGTAACCTCAGCATATTCTACCTTTATTATTTCTCACACATTATCTGCCTTTTGTTCTGAACTCATTTTAGTGCAATGAACTAGGCAAAATGTTTCTTGTGTTTGTGTGTGTCTAGGAGAGATTGTGCTGGTGTCTATGCCCGCTGACGGTCCTGTGGAAGCGTGGCAAGCCTTTTCTGATGGTCAAGACTCTACACCCACCAGCTCATTTACACAGCAAGATGTAAATGAAGGCACTGTCTGGTACCGACATTATGGATCTGGAACACAG[A/T]GAGACACTTTTCAGTTTCAGGTGAGACATGAATAGATTTAACCCAAGGCAAATACTGTCACTTCAGCACGAGCCCCGAGGCTCTGTGTGTAGAGCTAAAGGTGCCACTTAACGTTTGACTTGTTAAAACATGTCTACTCCTATAGCTCTTTGTTTTTTTATTGATTTGGTACTTAATTGGAGCAATACTAACTTAAACGCTCATCATAAACACATCGAGTAATTACTGTTAAACTTTTTGCCGTGCTCAAAGGAGCAGATTCTTCTGGCTTCTGCTTTGTGTTCTGCCAAAATAATGCTCCTGACAAAACATGACACTTCGGCAGATAATATAAAAGGGTAGATTGCAACTACTTTGACTTGTTTTTTTAGTTCAAATTAGCAATGATCTAACATATGATACATTACTTATTAAACATTTACTATTTAATGCCTAGTAATGTGGCTGCAAGAAATGAATACTTTAATACTTTCTTTTCTATGATTTATTAATCTAATAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33663
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 1588 3970 35 72
ENSDART00000097856 Nonsense 1600 3989 37 74
ENSDART00000137112 Nonsense 1554 3936 34 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40626258)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38425648
GRCz11 5 39025801
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGACTTGTCTCCATACTGTGTAGGTGTGCAACAGTTGGCAGTAACAGATT[C/A]AGACACGGCCCCTGAAGAGCTGGAGTTTGAGGTGGTGGAGGGACCACTAC
Long Flanking Sequence:
AATGTTTCATCCAACATGCCTGAAATGTTTTCTCAAAGACATTTTCCAAAATCTAATCTTTTTACACATAATTACAACTTTATGGTGCCATTTGTCTGCTTTCAGCTCATAAATAGTGTCTGCCTGACATATATTTAAAGCCTCATAAATCTATGAAGGACATGAAGTGACAACAGTCATGGCCGCAATATTAGTGTCAAAGGGTCCAAATTGAAGTGCTCAAATCTGGCCACTTCTTGAGACCATTCAGATTGAAGAATTTCAAAAGTAATGGATGCTTTTCCCTCCCATGACTCTGTACGCATGTTTAATTTGTGATGTGCCTTCCAAGAAACAGTTTTATTTTGGTCCCCTGCACCCTTTGAAGTTCCCACTTTAAAGCATAAACCATTTGAAGGGATTAGGGAATAGGGATGAGGTCTTCCGAATCCGATTCCGGAGCACAGTTATAGACTTGTCTCCATACTGTGTAGGTGTGCAACAGTTGGCAGTAACAGATT[C/A]AGACACGGCCCCTGAAGAGCTGGAGTTTGAGGTGGTGGAGGGACCACTACATGGGACGCTCCTGAAAGTGGACCTTGGATCCCAGGTCCAGATGGTCAATGGTAAATGCAACATTTTTTGTCTTCTTTGTCATACTTTCTATTAGGTTACTTTTTAGGTACATATACTGTACATCTTTGTTGCATGATTTACCATATTTTAGCTGCTAAGGTACTTGCTGTATAAACTTTACTCTATTGAAAAAAGAGATAACATGTCTCAAGATGTTTTCCTGGTAAAATGAGGTTGAAATAAAATAATAAAAAACTGTTTTCCACCTCAGGGGACACCTTTACCTCCAGTGATGTCACCAGAAACATCCTGCAGTATGAACATGCAGGGCTCACCACTGAAGAGGACTCCATGACCTTCTCAGTGACTGACGGGATCTCTATGACCTCCATCGCGGTGCAGGTTTTGGTGTCAGAGGTCAAAGGCGACGCACCCAAGCGTGACCCAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33664
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 2331 3970 48 72
ENSDART00000097856 Nonsense 2350 3989 50 74
ENSDART00000137112 Nonsense 2297 3936 47 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40651625)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38451015
GRCz11 5 39051168
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCATTGTTCAGGCACCTCGTCATGGGACCATCGAGCGCACCAGTAATGGT[C/T]AGCATTATCGTCAGACAAACACCTTCACTATGGACGACGTCTACCAGAAC
Long Flanking Sequence:
GTTTTCACTGTCATATGGTCCTTCGGAAATAATTCTGACCTAATGCTGATATGTTCTCGAAAATCATGTATTTCCTATTATTAATGCTAAAAAACAGGCCCACTGCTTAGTAGTTTTGTGGAAATCTTGCTATATTTTTCTTCAATGAATAGAAAGATAAATAAAACATTACTGGCTGAAGCGTCTTTGATGCTGTAGACAAAATTATGCGCAATCATGTCATACTAATGTGGGAAGTGGGCGAAGAGCGGATGGAAATGGAAAACATTTTTAGCAGAGTTGAAATTACTGTCACCCTGCTTGACATATGCTAAGTCTTTTACACCTGACATCTGTCGCACTAAACCTCATTTACTTCTTTTGTTAATTTTATTTCACACCTGTTTGACTTTCTCTCTCACTCTCTCTCTTTCTCTGCAATTTTCTGTCAGGAGGACTCTGTCACTTTCACCATTGTTCAGGCACCTCGTCATGGGACCATCGAGCGCACCAGTAATGGT[C/T]AGCATTATCGTCAGACAAACACCTTCACTATGGACGACGTCTACCAGAACCGCATCAGTTACAACCATGATGGCAGTAACTCCCTCAAAGATCGATTCACCTTCACTGTCGGTGACGGCACCAACATGTTCTTCATCATCGAGGAGGGTGGAAAAGAGGTTGGTTCGACTTCATGTAACCCCTTGTATTTTTTAATTATCATTTTATACTGTGAAGTGCATCAATATAAACTAGAATTTAAAATCATAACAATATTTCACAATATTAGCAATCAATTAAATAAATGCAGCCTCAGTAATCTTACATTTATTTAATTGTCTTTGATATTATGCATGTGGCCAGTTGTTGTGATTTCCTTTCCTTCAGCTTAGTCCCTTTATTCATTAGGGGTCTTCACAGTGGAATGAACCGCCAACTTATCCGCCATATGTTTTACACAGCAGATGCCCTTTCAGTTGCAACCCAGATCTGGGAAACACCCATCCACCCTCATTCACACG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14516
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 3010 3970 59 72
ENSDART00000097856 Nonsense 3029 3989 61 74
ENSDART00000137112 Nonsense 2976 3936 58 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40666717)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38466107
GRCz11 5 39066260
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTAAAAACAGTGCATGTCCTGCTTTTCAGCACCTACGATCGAGTTTGAA[C/T]AAGCCACATATCAAGTTCGTGAGCCACCTGGTCCCGATGGCATTGAGGTT
Long Flanking Sequence:
TCTGTGGCCAAAGCTCTTTTGAAATGCCAGTTTTGTTTCTTTATTTATATTTTTTTCTTTGTTGTCCCTAATTACAGTATTATTTAAGACGCCCATAATGATTGTTTACAGTTTAATGCAAGTTACTGCCATAATTCACACAAAGCTTCATGGGGTGTAGGAATAACGTAGATAAAAGGAAGAGTTCAGATGCAAAAGCTTGTAAGTGCCACCTGAAATGTTCTAAAATGAGCATTTTTCTTATGCTCATATGTTTCTGTGCAGTTATTTCAATTTAAAGTCAATAAAAAAAACTATCGATGGCCATAAAAGTGAAAAAAATGATTCAAGACACAGGACTCTTACAGAAATGCAAAATTTTAGAGGGAAATTTCAGATAGACTTTTGCATTTGAAGTCTTCAAACATATAGCCTGAATAGATTGAAAGTCAATTTTCATAAACGCATGAATGTAAAAACAGTGCATGTCCTGCTTTTCAGCACCTACGATCGAGTTTGAA[C/T]AAGCCACATATCAAGTTCGTGAGCCACCTGGTCCCGATGGCATTGAGGTTTTGAATATCAAGGTAATTCGTAAAGGAGACCTCGACCGCACCTCCAAAATTCGATGCAGCACGAGGGATGGATCGGCCCAGTCAGGTGTGGACTATAACCCAAAGAGTCGAGTGCTGAAGTACAGCCCTGGTAAGTTGTTGATTTACTTTCATTTATTTTACATTTGTAAACAAGAGCTTTGTTCTAATCTATGACTAATGTGTTGAAAAGGTGTGGACCACATCATGTTTAAGGTGGAGATTCTGTCCAATGAGGACAGAGAGTGGCATGAGTCTTTCTCTTTGGTCCTTGGTCCTGACGACCCAGTTGAAGCTGTTCTTGGAGAGATCATCATTGCAACAGTCACTATTCTGGATCAGGAGGCTGCAGGAAGTCTTATCCTTCCGGCTCCACCCATTGTAAGAATCGTACACTAGAAAAAAACAAGAAATACTTTATATTTCATTTAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45217
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 3088 3970 60 72
ENSDART00000097856 Nonsense 3107 3989 62 74
ENSDART00000137112 Nonsense 3054 3936 59 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40667033)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38466423
GRCz11 5 39066576
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGACCACATCATGTTTAAGGTGGAGATTCTGTCCAATGAGGACAGAGAGT[G/A]GCATGAGTCTTTCTCTTTGGTCCTTGGTCCTGACGACCCAGTTGAAGCTG
Long Flanking Sequence:
AAAAATGATTCAAGACACAGGACTCTTACAGAAATGCAAAATTTTAGAGGGAAATTTCAGATAGACTTTTGCATTTGAAGTCTTCAAACATATAGCCTGAATAGATTGAAAGTCAATTTTCATAAACGCATGAATGTAAAAACAGTGCATGTCCTGCTTTTCAGCACCTACGATCGAGTTTGAACAAGCCACATATCAAGTTCGTGAGCCACCTGGTCCCGATGGCATTGAGGTTTTGAATATCAAGGTAATTCGTAAAGGAGACCTCGACCGCACCTCCAAAATTCGATGCAGCACGAGGGATGGATCGGCCCAGTCAGGTGTGGACTATAACCCAAAGAGTCGAGTGCTGAAGTACAGCCCTGGTAAGTTGTTGATTTACTTTCATTTATTTTACATTTGTAAACAAGAGCTTTGTTCTAATCTATGACTAATGTGTTGAAAAGGTGTGGACCACATCATGTTTAAGGTGGAGATTCTGTCCAATGAGGACAGAGAGT[G/A]GCATGAGTCTTTCTCTTTGGTCCTTGGTCCTGACGACCCAGTTGAAGCTGTTCTTGGAGAGATCATCATTGCAACAGTCACTATTCTGGATCAGGAGGCTGCAGGAAGTCTTATCCTTCCGGCTCCACCCATTGTAAGAATCGTACACTAGAAAAAAACAAGAAATACTTTATATTTCATTTACATTTTTTGGACTCAGTTTATGTTGGAATTAAGCCAAATTTAACATATGTGTTATGTGAAAGTAACATTTTTAGTGATTAGCTTCCAAATTGGATTACAAACATGACTTTAGATATTTTCATTGTATTATAACATCAACTTTTTCACATCTAATAAAAAATACTAATACAAAATAATCAAAAAAGTTTAATCTTCAGTACTCCTAAATCATTTTAAAAGCACATGAGAGCTGTGAAATGTCTCACCATGTTGTTTAAATGTGATCTCATGTGTTCTTTTTGTTTTGCTCACAGGTGGTGTCTCTATCAGATTATGAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20492
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 3691 3970 70 72
ENSDART00000097856 Nonsense 3710 3989 72 74
ENSDART00000137112 Nonsense 3657 3936 69 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40683477)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38482867
GRCz11 5 39083020
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGAACCTGAATTCAGCCTACAAGCTGCAGCTGGAGAAAGTGTATTTGTG[T/A]ACGGGACGGGATGGATATGTTCCCTTCTTTGACCCTACAGGCACACTGTA
Long Flanking Sequence:
TGGCCCAGTAGAGCTTTATGTCTAGCAACACCCCTGCTTGAATGGCTTTGCTGTTGTCATTGACTTTCAGTGGACTTGTTTTACTCGTTTCATCAGATCGTTTGTGTGAATCAGCAAGAGTATTTATAATATCCAAGGACTTCTAACAATCTCTTTCAATCAATAGATTCCTGCTGCCCATCGCCTTCCAGCAGACCAACCGCCCTGTCCCTGTTGTCTACTCTCTGAATACTGAGTTCCAGCTTTGTAATAATGAGAAAGTTTTTCTAATGGATCCTGCTCTCGCAGACATGTCTGTGGCTGAGATGGATTACAAAGGAGCCTTTTCAATGGGTAAAATGAGCAAATTAGTGAAAATGATGAGATGCGTCACTATTGTGCTTTTGTTCATTCAATATTTGATGTTATGCAGGTCAAACCCTGTATGGCAGAGTCCTGTGGAATCCTGACCAGAACCTGAATTCAGCCTACAAGCTGCAGCTGGAGAAAGTGTATTTGTG[T/A]ACGGGACGGGATGGATATGTTCCCTTCTTTGACCCTACAGGCACACTGTATAATGAGGGCCCTCAGTATGGCTGCATTCAACCAAACAAGCACCTTAAACACAGGTTCTTACTTCTGGTAGGTGCATATTGTAACAAGTCCAGACCAGTTTAACTAGCCTAACAAGATCGGCTTGATGTGGTTAAGTTTTAACTGAAATACTTTTGTGGAGTGGAATTTTTCAGTGGGCACTGCAAAGATCAAGCTGGTTTTGTTTACCTTGAAAAAATATCAAATTTAATTCTTGTTTATTTCTGTAGTGTTTTTTACAATGTAGATTGTGTCAAAGCAGCTTAACATAGTTTTAGTAAAGTCCAGTTTTTAGTGTTAAAGTTTAGTTAAGTTCAGTGTGGTTTAAGTTTCACTGCTGAAAGTTCAAACACTGACAAGCAAATCCGAGAAAAGCAATGCAATATAATATGCAGTTCTTAAAGGAAAGTTTTTTTAATAATTGTTATACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20493
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 3810 3970 72 72
ENSDART00000097856 Nonsense 3829 3989 74 74
ENSDART00000137112 Nonsense 3776 3936 71 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40685554)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38484944
GRCz11 5 39085097
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTGGACCCGAGTCTATTTCGTCTCCCAGAATCCAGCGCTCAGTGACTTA[T/A]GAGCTGAAGCGAAGCCGCCGAGATCTAGTAGACCGATCAGGTCGCCTAAT
Long Flanking Sequence:
CTAATAATTCTGACTTCAACTGTATTTATGTGTGTTACCTAGGACCGAAAGCAGCCTGATGTATGTGATCGCTACTTCCATGATGTTCCCTTTGAGGCCAGCTTTGCATCTGACATTCCTGACCTCCTGTCTTTGTCTGCGATGCCCGGTGTAGACGGATTCACAATGAAGGTTGATGCCCTTTATAAGGTCAGTGACTTCAACAACCACATACTCAAACGTTCTAACTGAAACATGCTCCAAATCCTGGCATATGCCAGTGCCAAAGCATTTCAGATGTACCCTTCAAGCAATTGCCTAGATCTGTTTGTTTAAGAAAAGATGCCAGACTAACAGTCTGCCATGACTATAGGCAGCTTGGGGAGCTCTTTTGTTGGCATCTCATTCGTTGTGTTTGCTCTTCTTTAGGTTGAAGCAGGGCACCAATGGTACCTCCAGGTCATCTACGTTATTGGACCCGAGTCTATTTCGTCTCCCAGAATCCAGCGCTCAGTGACTTA[T/A]GAGCTGAAGCGAAGCCGCCGAGATCTAGTAGACCGATCAGGTCGCCTAATGCTTGATGAATCATTGATCTACGACAATGAAGGTGACCAGGTAAAGAATGGCACCAACATGAAGACCTTGAAGCTTGAGATGGAACCATCAGGCACCTTCAACCCCCAAATGGGAGGATCCATTGGGGGTGGCGTGGCAGCCATCCTCCTGCTTTTCTTAGTCCTTCTAGCGTTCTGTTTCATGGTCAGGAAGTGCCGCAGGGTTGTCAAAAAGAGGCCTTCAAAGACGGTGGAGGATTATCCTCTGAACACAAAGGTGGAGGTCTGCATTGAACGTCTGGAGAAAAACCTCAACAGCAAGCACTGCTCTGTAAGAAACATCAACGTTCTCAACAAGAACCCCGACACCTACAAAGTCAATGGGGTGAAAGTCAAACAGGTCAATCTGGAGGTCAAACTCCACAACAATCTAAATGACGGCACTGAAGTCTGACCTTCTAGAGTATTTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa25308
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 3830 3970 72 72
ENSDART00000097856 Nonsense 3849 3989 74 74
ENSDART00000137112 Nonsense 3796 3936 71 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40685612)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38485002
GRCz11 5 39085155
KASP Assay ID:
554-7507.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCGAAGCCGCCGAGATCTAGTAGACCGATCAGGTCGCCTAATGCTTGAT[G/T]AATCATTGATCTACGACAATGAAGGTGACCAGGTAAAGAATGGCACCAAC
Long Flanking Sequence:
ATGTATGTGATCGCTACTTCCATGATGTTCCCTTTGAGGCCAGCTTTGCATCTGACATTCCTGACCTCCTGTCTTTGTCTGCGATGCCCGGTGTAGACGGATTCACAATGAAGGTTGATGCCCTTTATAAGGTCAGTGACTTCAACAACCACATACTCAAACGTTCTAACTGAAACATGCTCCAAATCCTGGCATATGCCAGTGCCAAAGCATTTCAGATGTACCCTTCAAGCAATTGCCTAGATCTGTTTGTTTAAGAAAAGATGCCAGACTAACAGTCTGCCATGACTATAGGCAGCTTGGGGAGCTCTTTTGTTGGCATCTCATTCGTTGTGTTTGCTCTTCTTTAGGTTGAAGCAGGGCACCAATGGTACCTCCAGGTCATCTACGTTATTGGACCCGAGTCTATTTCGTCTCCCAGAATCCAGCGCTCAGTGACTTATGAGCTGAAGCGAAGCCGCCGAGATCTAGTAGACCGATCAGGTCGCCTAATGCTTGAT[G/T]AATCATTGATCTACGACAATGAAGGTGACCAGGTAAAGAATGGCACCAACATGAAGACCTTGAAGCTTGAGATGGAACCATCAGGCACCTTCAACCCCCAAATGGGAGGATCCATTGGGGGTGGCGTGGCAGCCATCCTCCTGCTTTTCTTAGTCCTTCTAGCGTTCTGTTTCATGGTCAGGAAGTGCCGCAGGGTTGTCAAAAAGAGGCCTTCAAAGACGGTGGAGGATTATCCTCTGAACACAAAGGTGGAGGTCTGCATTGAACGTCTGGAGAAAAACCTCAACAGCAAGCACTGCTCTGTAAGAAACATCAACGTTCTCAACAAGAACCCCGACACCTACAAAGTCAATGGGGTGAAAGTCAAACAGGTCAATCTGGAGGTCAAACTCCACAACAATCTAAATGACGGCACTGAAGTCTGACCTTCTAGAGTATTTAATGAGAAAAAGAAACATTTTCTATGACTATTTGTAATAATGACATATGTTTAATGTATT
Associated Phenotype:
Not determined