Busch Lab

ZMP

fras1

Ensembl ID:
ENSDARG00000054619
ZFIN ID:
ZDB-GENE-060526-68
Description:
extracellular matrix protein FRAS1 [Source:RefSeq peptide;Acc:NP_001124312]
Human Orthologue:
FRAS1
Human Description:
Fraser syndrome 1 [Source:HGNC Symbol;Acc:19185]
Mouse Orthologue:
Fras1
Mouse Description:
Fraser syndrome 1 homolog (human) Gene [Source:MGI Symbol;Acc:MGI:2385368]

Alleles

There are 15 alleles of this gene:

Allele Name Consequence Status Availability
sa17510 Nonsense Available for shipment Available now
sa20491 Nonsense Available for shipment Available now
sa14516 Nonsense Available for shipment Available now
sa20492 Nonsense Available for shipment Available now
sa20493 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa17510
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 537 3970 14 72
ENSDART00000097856 Nonsense 548 3989 15 74
ENSDART00000137112 Nonsense 503 3936 13 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40557425)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38356815
GRCz11 5 38956968
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GATATTTGATTTATTTATTTGTAGCTTGTGACCCTTCCTGTGCAACCTGC[C/T]AACCTGACAGCCCCAGCTGTATGAGCTGCCCTGCAGAACAWGCACTGCAT
Long Flanking Sequence:
ACCATTCCTTGTACTGTAATGACAAAGCCTGCTTCCCAAACATCCCCCTGTCAACACTACAGCAAATGCAGAATGACACTCTACATGTCTTCTTTATAGTGGAGAACTTAAGCTGCCACACATCCAGCTTGTCTGTTTATCAGAAGTAGAAGTGTGCTGATGGGAGTTTGTTGGGTTTCTGACTGTGGGTAAAAATAGCTTGTGGTTTGAGCATTTATACTGTATTTTGTATTGATATGCTGACTTGAAGGTTCTTAGGCTTTTCTATATTTGTTTGTTCTATTTTTAATTGAGGTTTCTCATAAGTGTTTCTCACAAAACCTCAAATTATTTTAGTCATATGAGGTTATACTAAATTAAAAAATAAAGAAATCTTGTAAAACACGTTTCTATAAAAATAAAAGTGCGTTTTATTTACAGCATTGCAGTGTAGCTGTTTTATTTATATCAGATATTTGATTTATTTATTTGTAGCTTGTGACCCTTCCTGTGCAACCTGC[C/T]AACCTGACAGCCCCAGCTGTATGAGCTGCCCTGCAGAACATGCACTGCATCAAGGGAAATGTGCACCACAATGTCCAGCGCAGTATTACAAGGATGACCACGGCCGATGCCAAGGTGAAAAATTATCTATTACTGTTTTTATATTTTGTGCAACACGTAGGCTTACTGGCAACCAGAGGCTCATAAATCTCTTTTGTAGCGAATTGAAAACATATTCTTCATTCTGAAACCCATTTTCTCTGCCAGAGACGCTGCTTTGGAAAGTTTCCCTGTCATTTGGACTCGATCCGTTGAAATGTCTTACCTAGGTTTTTTCCGCAAAACCGCAGGGCCTAGAAAATGATCATTGTAGTGCTATGCTCGATTAATTTTAAAATCACATTTAATACCCTGTCAAAACCTAATCCTGTGGTGTTTAGTCAATTAGCATTTTTTTTGCCAGGCACCTTTATCCTTCTAGCTGATAAAAACAGCATAGAGTGCAGTAGCTAGAAAATGAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20491
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 1394 3970 29 72
ENSDART00000097856 Nonsense 1406 3989 31 74
ENSDART00000137112 Nonsense 1360 3936 28 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40613255)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38412645
GRCz11 5 39012798
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGTAAATGAAGGCACTGTCTGGTACCGACATTATGGATCTGGAACACAG[A/T]GAGACACTTTTCAGTTTCAGGTGAGACATGAATAGATTTAACCCAAGGCA
Long Flanking Sequence:
AGATAGGTCTTTTACACTGACACAGACGCAGCGTTAATAATGATGATGATGTTTTATGCTTTCTCTGTAGGTTGGATTGACTCCGCACCTGCGTTCAGTGCCCAAAACTTGGGTGAAGGAGGGAGGAATGGTGCAGCTTTCTAAAAAGTGTCTCAATGCTCAATTCAAAGGAGCCAGTGACTCTGAGATCCTGTACAGCATCCATTCTGAGAGCGGACAGCCCAAATACGGTAACCTCAGCATATTCTACCTTTATTATTTCTCACACATTATCTGCCTTTTGTTCTGAACTCATTTTAGTGCAATGAACTAGGCAAAATGTTTCTTGTGTTTGTGTGTGTCTAGGAGAGATTGTGCTGGTGTCTATGCCCGCTGACGGTCCTGTGGAAGCGTGGCAAGCCTTTTCTGATGGTCAAGACTCTACACCCACCAGCTCATTTACACAGCAAGATGTAAATGAAGGCACTGTCTGGTACCGACATTATGGATCTGGAACACAG[A/T]GAGACACTTTTCAGTTTCAGGTGAGACATGAATAGATTTAACCCAAGGCAAATACTGTCACTTCAGCACGAGCCCCGAGGCTCTGTGTGTAGAGCTAAAGGTGCCACTTAACGTTTGACTTGTTAAAACATGTCTACTCCTATAGCTCTTTGTTTTTTTATTGATTTGGTACTTAATTGGAGCAATACTAACTTAAACGCTCATCATAAACACATCGAGTAATTACTGTTAAACTTTTTGCCGTGCTCAAAGGAGCAGATTCTTCTGGCTTCTGCTTTGTGTTCTGCCAAAATAATGCTCCTGACAAAACATGACACTTCGGCAGATAATATAAAAGGGTAGATTGCAACTACTTTGACTTGTTTTTTTAGTTCAAATTAGCAATGATCTAACATATGATACATTACTTATTAAACATTTACTATTTAATGCCTAGTAATGTGGCTGCAAGAAATGAATACTTTAATACTTTCTTTTCTATGATTTATTAATCTAATAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14516
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 3010 3970 59 72
ENSDART00000097856 Nonsense 3029 3989 61 74
ENSDART00000137112 Nonsense 2976 3936 58 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40666717)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38466107
GRCz11 5 39066260
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTAAAAACAGTGCATGTCCTGCTTTTCAGCACCTACGATCGAGTTTGAA[C/T]AAGCCACATATCAAGTTCGTGAGCCACCTGGTCCCGATGGCATTGAGGTT
Long Flanking Sequence:
TCTGTGGCCAAAGCTCTTTTGAAATGCCAGTTTTGTTTCTTTATTTATATTTTTTTCTTTGTTGTCCCTAATTACAGTATTATTTAAGACGCCCATAATGATTGTTTACAGTTTAATGCAAGTTACTGCCATAATTCACACAAAGCTTCATGGGGTGTAGGAATAACGTAGATAAAAGGAAGAGTTCAGATGCAAAAGCTTGTAAGTGCCACCTGAAATGTTCTAAAATGAGCATTTTTCTTATGCTCATATGTTTCTGTGCAGTTATTTCAATTTAAAGTCAATAAAAAAAACTATCGATGGCCATAAAAGTGAAAAAAATGATTCAAGACACAGGACTCTTACAGAAATGCAAAATTTTAGAGGGAAATTTCAGATAGACTTTTGCATTTGAAGTCTTCAAACATATAGCCTGAATAGATTGAAAGTCAATTTTCATAAACGCATGAATGTAAAAACAGTGCATGTCCTGCTTTTCAGCACCTACGATCGAGTTTGAA[C/T]AAGCCACATATCAAGTTCGTGAGCCACCTGGTCCCGATGGCATTGAGGTTTTGAATATCAAGGTAATTCGTAAAGGAGACCTCGACCGCACCTCCAAAATTCGATGCAGCACGAGGGATGGATCGGCCCAGTCAGGTGTGGACTATAACCCAAAGAGTCGAGTGCTGAAGTACAGCCCTGGTAAGTTGTTGATTTACTTTCATTTATTTTACATTTGTAAACAAGAGCTTTGTTCTAATCTATGACTAATGTGTTGAAAAGGTGTGGACCACATCATGTTTAAGGTGGAGATTCTGTCCAATGAGGACAGAGAGTGGCATGAGTCTTTCTCTTTGGTCCTTGGTCCTGACGACCCAGTTGAAGCTGTTCTTGGAGAGATCATCATTGCAACAGTCACTATTCTGGATCAGGAGGCTGCAGGAAGTCTTATCCTTCCGGCTCCACCCATTGTAAGAATCGTACACTAGAAAAAAACAAGAAATACTTTATATTTCATTTAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20492
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 3691 3970 70 72
ENSDART00000097856 Nonsense 3710 3989 72 74
ENSDART00000137112 Nonsense 3657 3936 69 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40683477)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38482867
GRCz11 5 39083020
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGAACCTGAATTCAGCCTACAAGCTGCAGCTGGAGAAAGTGTATTTGTG[T/A]ACGGGACGGGATGGATATGTTCCCTTCTTTGACCCTACAGGCACACTGTA
Long Flanking Sequence:
TGGCCCAGTAGAGCTTTATGTCTAGCAACACCCCTGCTTGAATGGCTTTGCTGTTGTCATTGACTTTCAGTGGACTTGTTTTACTCGTTTCATCAGATCGTTTGTGTGAATCAGCAAGAGTATTTATAATATCCAAGGACTTCTAACAATCTCTTTCAATCAATAGATTCCTGCTGCCCATCGCCTTCCAGCAGACCAACCGCCCTGTCCCTGTTGTCTACTCTCTGAATACTGAGTTCCAGCTTTGTAATAATGAGAAAGTTTTTCTAATGGATCCTGCTCTCGCAGACATGTCTGTGGCTGAGATGGATTACAAAGGAGCCTTTTCAATGGGTAAAATGAGCAAATTAGTGAAAATGATGAGATGCGTCACTATTGTGCTTTTGTTCATTCAATATTTGATGTTATGCAGGTCAAACCCTGTATGGCAGAGTCCTGTGGAATCCTGACCAGAACCTGAATTCAGCCTACAAGCTGCAGCTGGAGAAAGTGTATTTGTG[T/A]ACGGGACGGGATGGATATGTTCCCTTCTTTGACCCTACAGGCACACTGTATAATGAGGGCCCTCAGTATGGCTGCATTCAACCAAACAAGCACCTTAAACACAGGTTCTTACTTCTGGTAGGTGCATATTGTAACAAGTCCAGACCAGTTTAACTAGCCTAACAAGATCGGCTTGATGTGGTTAAGTTTTAACTGAAATACTTTTGTGGAGTGGAATTTTTCAGTGGGCACTGCAAAGATCAAGCTGGTTTTGTTTACCTTGAAAAAATATCAAATTTAATTCTTGTTTATTTCTGTAGTGTTTTTTACAATGTAGATTGTGTCAAAGCAGCTTAACATAGTTTTAGTAAAGTCCAGTTTTTAGTGTTAAAGTTTAGTTAAGTTCAGTGTGGTTTAAGTTTCACTGCTGAAAGTTCAAACACTGACAAGCAAATCCGAGAAAAGCAATGCAATATAATATGCAGTTCTTAAAGGAAAGTTTTTTTAATAATTGTTATACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20493
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076845 Nonsense 3810 3970 72 72
ENSDART00000097856 Nonsense 3829 3989 74 74
ENSDART00000137112 Nonsense 3776 3936 71 71

The following transcripts of ENSDARG00000054619 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 5 (position 40685554)
Other Location(s):
Assembly Chromosome Position
GRCz10 5 38484944
GRCz11 5 39085097
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTGGACCCGAGTCTATTTCGTCTCCCAGAATCCAGCGCTCAGTGACTTA[T/A]GAGCTGAAGCGAAGCCGCCGAGATCTAGTAGACCGATCAGGTCGCCTAAT
Long Flanking Sequence:
CTAATAATTCTGACTTCAACTGTATTTATGTGTGTTACCTAGGACCGAAAGCAGCCTGATGTATGTGATCGCTACTTCCATGATGTTCCCTTTGAGGCCAGCTTTGCATCTGACATTCCTGACCTCCTGTCTTTGTCTGCGATGCCCGGTGTAGACGGATTCACAATGAAGGTTGATGCCCTTTATAAGGTCAGTGACTTCAACAACCACATACTCAAACGTTCTAACTGAAACATGCTCCAAATCCTGGCATATGCCAGTGCCAAAGCATTTCAGATGTACCCTTCAAGCAATTGCCTAGATCTGTTTGTTTAAGAAAAGATGCCAGACTAACAGTCTGCCATGACTATAGGCAGCTTGGGGAGCTCTTTTGTTGGCATCTCATTCGTTGTGTTTGCTCTTCTTTAGGTTGAAGCAGGGCACCAATGGTACCTCCAGGTCATCTACGTTATTGGACCCGAGTCTATTTCGTCTCCCAGAATCCAGCGCTCAGTGACTTA[T/A]GAGCTGAAGCGAAGCCGCCGAGATCTAGTAGACCGATCAGGTCGCCTAATGCTTGATGAATCATTGATCTACGACAATGAAGGTGACCAGGTAAAGAATGGCACCAACATGAAGACCTTGAAGCTTGAGATGGAACCATCAGGCACCTTCAACCCCCAAATGGGAGGATCCATTGGGGGTGGCGTGGCAGCCATCCTCCTGCTTTTCTTAGTCCTTCTAGCGTTCTGTTTCATGGTCAGGAAGTGCCGCAGGGTTGTCAAAAAGAGGCCTTCAAAGACGGTGGAGGATTATCCTCTGAACACAAAGGTGGAGGTCTGCATTGAACGTCTGGAGAAAAACCTCAACAGCAAGCACTGCTCTGTAAGAAACATCAACGTTCTCAACAAGAACCCCGACACCTACAAAGTCAATGGGGTGAAAGTCAAACAGGTCAATCTGGAGGTCAAACTCCACAACAATCTAAATGACGGCACTGAAGTCTGACCTTCTAGAGTATTTAA
Associated Phenotype:
Not determined