Busch Lab

ZMP

zgc:77151

Ensembl ID:
ENSDARG00000054307
ZFIN ID:
ZDB-GENE-030131-9097
Description:
hypothetical protein LOC337153 [Source:RefSeq peptide;Acc:NP_991128]
Human Orthologues:
ARID5A, ARID5B
Human Descriptions:
AT rich interactive domain 5A (MRF1-like) [Source:HGNC Symbol;Acc:17361]
AT rich interactive domain 5B (MRF1-like) [Source:HGNC Symbol;Acc:17362]
Mouse Orthologues:
Arid5a, Arid5b
Mouse Descriptions:
AT rich interactive domain 5A (MRF1-like) Gene [Source:MGI Symbol;Acc:MGI:2443039]
AT rich interactive domain 5B (MRF1-like) Gene [Source:MGI Symbol;Acc:MGI:2175912]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa15960 Nonsense Available for shipment Available now

Mutation Details

This allele has been removed from public view.

Allele Name:
sa29643
Status:
Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
G > A
Consequence:
Missense, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076483 Missense 282 305 7 11
ENSDART00000125994 Missense 280 303 7 7
ENSDART00000126335 Nonsense 282 856 6 10
ENSDART00000144178 Nonsense 275 849 5 9
Genomic Location (Zv9):
Chromosome 21 (position 36313298)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 37302647
GRCz11 21 36987834
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTTAGGAGAATGTGATGGGTAGTGTGGAGATGCACTGGGATGGAAACTG[G/A]CTCCCACATCCAGAAGAGCAGCTCTTCCTGGATCAGCTATTTATCTTTAT
Long Flanking Sequence:
TGTGCTCTGCTGTCCGAGGCTAAGCGAGGCGCGCGCGCAAACACACACACGCTACCTGTCCAAGGCTAAGCACGGCGCGCACACACACAACAGCACGTGCTCTTGCGCTTTTAAAAATATGAATGATGCGCATCCAGTGCTGCAAAAGTTACATTACAGCAAATGCTTTTAGTCAATTTCACGTGGAACTGAGCTTTGCAGAGGCAAAGAGTTTTCACACGTGTACAAATGGAAAGGCGGCGGTACGTGATGGAATAATCGTTTATCTCGATTAATAGTTTTTCATAATCGTTAAAAGCCAAAATCGAAATCGAAATCGGATTTTCGATTAATTGCACAGCCCTACCCTCTACTTCAGTATTGTGGCACATTTCCAGCTAAAACAGAATATTGAATAAAATGAATAGGAACTTTCAGTTCACACACACTTTAATGTGCTGTAATTACTTCCTTTAGGAGAATGTGATGGGTAGTGTGGAGATGCACTGGGATGGAAACTG[G/A]CTCCCACATCCAGAAGAGCAGCTCTTCCTGGATCAGCTATTTATCTTTATGCAGCGCAGAGGTTCTCCTATAAGCAAAGTCCCCAATCTTGGATTTAAAAAGAGTACGTATGCATTTTCTGGATTTACATGTAAAAATGGTTAAGTATTGACTATATTACTCTAAATACTTTTGTGTAGTTTCCACCTTAACTAAATAAGCTTTTCTTGATTTTTCAACAGTTGACCTCTTCCTCATGTATTCAGTTGTAAAAAGGCTGGGAGGCTATGACAGGGTAAGTTTGTCTTGCTGATCCGTTACTTGGTCCTGCTGAGTAAGCTGTAATCCATCATAAAGGAATGAAAGTGATAGCTGTGAACTCTGTAGTGTAATTCAGAATCATTGTCCTTATTGCCTGCAGGTGACATCGCACCGTTTGTGGAAGACTGTGTACAATGAGTTGGGTGGAAGCCCAGGCAGCACCAGCGCTGCCACCTGCACCAGGAGGCATTATGAAAGGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15960
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000076483 None None 305 11 11
ENSDART00000125994 None None 303 None 7
ENSDART00000126335 Nonsense 693 856 10 10
ENSDART00000144178 Nonsense 686 849 9 9
Genomic Location (Zv9):
Chromosome 21 (position 36311467)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 37300816
GRCz11 21 36986003
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCATCACCAAGAGGCCTGCAGGGGACATGGAGCTCACAGACCTTCAGAGT[C/T]GAGAAGTCCAGTCTGRGACCAAGAGGCCGAAGATGGAAGCTGAGGATTTT
Long Flanking Sequence:
TGTTGGCAGGTGGTTCCCTAGAAAGATTCAGTCCCACTAAAGGACTTTGTCCTTTGGATCTCTTCAGAGCCCGTCTAGGCCTTAATGGAGCTCATGAGGTAGCTCCTCAAGATTCTTCGATAAACCACCAAACTTTGGTCAACCAGCCTAAAGTCAGCACACCTGAGACCCCTGAGAGCCCCCAGCACCAATGTTCAGGGTGCTGTTCAGATCCCTCATCCCAGAATGGAGCCCCCCGAGCCCCTCTGCCCCCTCTTAGGATTATCCCGCTTGACATAGGCTGTAGCCTGCAGTTGCGTCAACTGATGCGCACCCGTCTTGGCTCAACACACATGAACACCTTCACCAAGCGACTTTCAGAAGTTCTGGCTCAGGATCTCAACAAGACCTCCCAACCCAACGGTAATGTTCCTCAAGAGCAATCCCTGCCACTGAACTTGAGTAGGAGAACCATCACCAAGAGGCCTGCAGGGGACATGGAGCTCACAGACCTTCAGAGT[C/T]GAGAAGTCCAGTCTGGGACCAAGAGGCCGAAGATGGAAGCTGAGGATTTTGGAGTGTCTGTAAAATGGAATGGCTTGTCCTTTCTGGTGCCTTTGAACCAAGATGAGCCAGCAGATCTTAGCTCTCCCAGCAGGGCCAGAGCTTTAGTACAGGACAGGAACAAAGTAGCTTCAGCTCTTCCCGAACCCACTTGTTTCTCTTTAGTGCCAAAATCAGATGTCCCCCTTGAAATCCCCTCCAGTATTGGTGCTTCACCGGACACTCTACCTTGCATTTTTCAGCTGAAACAAGGGGAAGACAAGACCAGCACAATTGCAGTGACAGTTAAAGCCGAACAAGAAAGCACATCTCTGGATCCAGATCTAGAACCTCCTCAACCAAACAGTGACCTCTACTCGCAGTGTGTACCTACTGATGATATCAAAGAGTCGGATGCAGTTTCTTCTCTCAAAGTACTTTCTAATTCTTTCCTTTCAAAGCCATCAAGCTGTTAGCATCCA
Associated Phenotype:
Not determined