ZMP

rnf40

Ensembl ID:

ENSDARG00000054201

ZFIN ID:

ZDB-GENE-030131-6607

Description:

Novel protein (Zgc:171713) [Source:UniProtKB/TrEMBL;Acc:Q7T178]

Human Orthologue:

RNF40

Human Description:

ring finger protein 40 [Source:HGNC Symbol;Acc:16867]

Mouse Orthologue:

Rnf40

Mouse Description:

ring finger protein 40 Gene [Source:MGI Symbol;Acc:MGI:2142048]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa35311	Splice Site, Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa35311

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Splice Site, Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000076342	Splice Site, Nonsense	898	990	22	24
ENSDART00000076346	None	None	575	None	12
ENSDART00000076355	Splice Site, Nonsense	493	558	13	17
ENSDART00000076572	None	None	331	None	7
ENSDART00000137069	None	None	529	None	10
ENSDART00000145221	Splice Site, Nonsense	337	429	6	8

Genomic Location (Zv9):

Chromosome 12 (position 30478635)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	12	28815572
GRCz11	12	28930474

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TAGACAACCGCACCGCCCGTGAGAGGGAGAGTGTCAACCTCAAGAAAGCA[C/T]AGGTACATGGGCATGCGTGTTGTAGATGTGTTTGGGATACAGATGAGTGG

Long Flanking Sequence:

TAAGGCAAAAAAGCCTGCACATAAAAGCAGTAAACAACTTCTGTTTTCACAATACTGCTGTGATTGCATCATCTCCTTTTTACTGCCCTTCCCAGGTGGACGCTCAGCTGCTGGTCGTACAGAAACTGGAAGAGAAGGAGGGCGTCCTGCAGAGCACGCTGGCCACGCTGGAGAAAGAGCTGGCGCTGCGCACTCAAGCATTGGAGCTCAACAAGCGCAAGGTAAATCCGGAAAGATCACAGACGCCCACCTCTGTTCTCATGTCCATGACAACCATGACTCAGCTTAACCAACCATTAGTGCACATTTCCAGATGTGTGTGTGTGTGTGTTTAATGCTTGTCTTTCTGCATGATGGCTCAGGCTGTGGAGGCGGCCCAGTTGGCCGAAGACCTTAAAGTACAGCTGGAACACACTCAGACCAAGCTGAGGGAGATCCAGGCCTCGGTACTAGACAACCGCACCGCCCGTGAGAGGGAGAGTGTCAACCTCAAGAAAGCA[C/T]AGGTACATGGGCATGCGTGTTGTAGATGTGTTTGGGATACAGATGAGTGGGAAGAATGTGTAAAACATTGGTGTTCTGTTGCTTATTTCAGGAGGACTTATCCAGACTAAGGCGCAAGCTGGAGAAGCAGAAGAAGGTTGAGGTGTACACGGATGCTGATGAGATTCTGCAAGAAGAAATTAATCAGTATAAGGTGAAGATTTGCTCTTCAGTTATTCATTTGATGTATGTAATCAAAGGTTTAGGCACAGTAAATACTTTTTTTTTAAATTCTGGTTCAAAAAGGATATGATCTATAGTGATTGATCTATAGTATGGTGTAAAATTGACTTCATAATTTTACAAGATGTTCAAGTAATTGCTGTTTTTGTTGTTTTGAATAAGATTTACCAAAGAATCCTAAAAATATTCTGCTGGAATTTCTTAAATGACATTTAACACTTATTTTAAATTGTAATCATTTTTCACAATAGTTCTGTTTTGTGTATGTTTTTAATATT

Associated Phenotype:

Not determined