ZMP

dhx38

Ensembl ID:

ENSDARG00000053946

ZFIN IDs:

ZDB-GENE-040426-1144, ZDB-GENE-040426-1144

Description:

pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Source:RefSeq peptide;Acc:NP_957170]

Human Orthologue:

DHX38

Human Description:

DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:HGNC Symbol;Acc:17211]

Mouse Orthologue:

Dhx38

Mouse Description:

DEAH (Asp-Glu-Ala-His) box polypeptide 38 Gene [Source:MGI Symbol;Acc:MGI:1927617]

Alleles

There are 4 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa30637	Nonsense	Mutation detected in F1 DNA	Not yet available
sa45302	Nonsense	Mutation detected in F1 DNA	Not yet available
sa27096	Splice Site, Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa30637

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000076056	Nonsense	355	1258	8	27
ENSDART00000128289	Nonsense	355	1258	7	28

Genomic Location (Zv9):

Chromosome 7 (position 69813694)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	67536363
GRCz11	7	67759715

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TACGTACTAACTAGTAGTTTCATGTCCAAACAGCAAGCGGATCGAGACTG[G/A]TACATGATGGATGAAGGTTATGACGAGTTTCACAACCCACTGACATCCAG

Long Flanking Sequence:

GAGGGAGGTGTCGCGGACTTAACTGAGGACGCGGGTGGTAAGGGAGGAGTTGCGGATGCTGCCCTCTCTATACTGCCGCCCTAGGCGGCCGCCTAGGTCGCCTCTATGGACGCGCCGGCCCTGTGTGTTAGTCCAAAATGTACCACTAAAGCAAATCATAAACAATAATAGCAAAGAGGTTAACTAATTTACATATTATTATCAAGTAAATGAATAAATAAAAACATAGAGGTAAAGAAAAAAGAAACATTATACCAAATATAAGCACTAATATTGTATCTAAATAGTCACAAAGCCTCTATAAATAACATACAACAAAATAATATATTTTTCAGACCACAGCACAATCCTATAATGGTTTACTTTATAACTAATTGCACTCAACACAGACCCTGATGCATTCACATTTTGTTAGCAAAACTGGAATCCATGTTTAAGCTGATATTCTAATACGTACTAACTAGTAGTTTCATGTCCAAACAGCAAGCGGATCGAGACTG[G/A]TACATGATGGATGAAGGTTATGACGAGTTTCACAACCCACTGACATCCAGCTCAGACGAATATGTGAAGAAGCGGGAGCAGATCCTGCAGAAACAGACCCAGAAACGCATCTCGGCACAGAAAAGACAAATCAATGAGGTGACAATACACATCCTCACACATCTGTACAGATCCTCACACATCTCATACTCACTCAACTGTCGCTTTCTCTCCAGGATAACGAACGCTGGGAGACGAACCGCATGCTCACCAGTGGAGTGGTTCAGCGTCTGGAGGTGGATGAGGATTTTGAGGAAGACAACGCAGCCCGAGTTCATTTACTTGTGCATAACCTTGTGCCACCCTTCCTCGATGGGAGGATTGTCTTCACTAAACAGGTACTACAGTGGCCGAGAGAGCTAGGTTAACTAGACTAGTTATTTAAGCATGTCATTGGACAACAGTGTTTTTTTTCTATAGCCAATAAAAAAAAAAAACAATTCTTAAGGGGGATAATACTG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa45302

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

G > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000076056	Nonsense	1152	1258	24	27
ENSDART00000128289	Nonsense	1152	1258	23	28

Genomic Location (Zv9):

Chromosome 7 (position 69838524)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	67561193
GRCz11	7	67784545

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCAGCGCTTTGTTCGGGATGGGCTACACCCCTGACTACATCATCTACCAT[G/T]AACTGGTCATGACCACAAAGGTACTACTTCCTCCTCAGTCCGTTAATGTG

Long Flanking Sequence:

ACTGTAAATTAGAAATGTCTAATAAAGTGAAAATTAGAATGAAGTGCAATTAGAAATATTAATGTCAATCTTTTGGTTTAACTGTATATGTCTCTAAAAGCTGATGTGCATTATGTCAGCACGTAATTAAGCATATCTAATATTTTAATAACTATGTGTGTGTTGTGGCACAGGTGCGTGAGGTGCGAGCTCAGCTCAAAGACATCATGGTGCAGCAGAAAATGAATCTGATCTCCTGCGGTTCAGACTGGGACGTGATCAGGAAGTGCATCTGTGCTGCATACTTTCACCAGGCTGCTAAATTAAAGGTACATGACCATTTAGCAAATTTGTCAAATAATTCAGTTATATCACTCAGCACAGGATATTTTGCTGACCTGTGTTTGTGTGTTTAGGGAATTGGAGAGTATGTGAATGTGAGAACCGGGATGCCCTGTCATCTGCACCCCACCAGCGCTTTGTTCGGGATGGGCTACACCCCTGACTACATCATCTACCAT[G/T]AACTGGTCATGACCACAAAGGTACTACTTCCTCCTCAGTCCGTTAATGTGTTAGTTAGTTTGAATTACAATTTGCTATAACTGTTGATGCACATGCTCTAATACCATTTGACACCAAGCTGTAGTCAATTCAACTTGTAATATGGAAATGATAAGAAGAAGAATAATATTTAAATAAGCAAACAAACAAATTAATTAATAAATAATTTAATTTAGCACCATTGTGTGGTGAATGCAACTTGTAATATTGCAATAATAAATAAATAAATAAATAAGCAAACTAACAAATAAGCTTATTACTTAATTAAGCACCAGGCTGTGGAATTCTACTTGTAATGTTGAAATATTGAAAAACTATAATAATAATAATAATAATAATAATAATAATAATAATAGTAATAGTAATAATAATAATAATAATAATAATAAATAAGCAAATAAACAAATGCATTATTTCATTAATTAAGCACAAAACTGTGGTGAATTCAACTTGTAATATTA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa27096

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Splice Site, Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000076056	Splice Site, Nonsense	1190	1258	25	27
ENSDART00000128289	Splice Site, Nonsense	1190	1258	24	28

Genomic Location (Zv9):

Chromosome 7 (position 69840728)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	67563397
GRCz11	7	67786749

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CTGAGCTGGGACCAATGTTCTACAGCATCAAACACGCAGGGAAGAGCAGA[C/T]AGGTGCGCAAATTCAAATCACACCCAACACTTAATAAGAGTGTGCAGTAT

Long Flanking Sequence:

TTTACTATTTGAGTCATTGCAGAGATGTATGGATGCAGTCCTCCAAGCTTATGGGAGTCATACACAATATTAAATCTTTTTCCGCTGCAGCATGACTTTTTATTCTATAATGTACATTATTTCTGTGTAGTGACAAGATTTTTGTCTAAGCAAAGTCAGACCTTACTGTCCTGATTAAATTATTAGAAATCAAGGCATGATCATGTTTTATTTTGGTAAAATAAGTGTAATCTAGAGGCATTTGTCTTTCATATAAGCCACTTCTGATACCAAGTGATCGACTAGAAGTCAAGTTATTATTTGTTGTTCCTAAAGCTTGGCTAGGCAACAAGACTTTAGTCAGGTAGTGCACTATGGAGTCCTGGTGATCATTGATTTGTTGACGTGTGTGTATATTTGTGTTTCAGGAGTACATGCAGTGTGTGACGGCAGTGGATGGTGAGTGGCTGGCTGAGCTGGGACCAATGTTCTACAGCATCAAACACGCAGGGAAGAGCAGA[C/T]AGGTGCGCAAATTCAAATCACACCCAACACTTAATAAGAGTGTGCAGTATTCATCACCTGCATTGTTTTAACAATGTGCCAGCTGATTATGAAGTGTCACTTAATTTGGGGGAATAAAGCACACATCTTGAGAGCCCAAAAGCATTCACTGCACGATAAAGCCTATTAGAATGTTATGAAAGCGAACAAATTAATTTCACCGAAGTAAGTATATAATATTCCTGAATATCAGTATGTTGGCCTGATTGCATAATTGTTGTGGATTTAAGATTACAGTTCAACAAATAAGAGGTCAGAAAGCTACATTCTAGGATAACACTTCAGATTAATTAACAATTCATACCATTTACAACTGGCTTATTATCTGCCTGTTATTAAAATATTAACTGTTTATCAGCACTTATAAAATATTAACTTATTCTATTTCCTTAATCCTACCCAATACCTAAACAAAACTACTACCATACTAAGTATTAATAGGCAATTAATTGGTAATTTAT

Associated Phenotype:

Not determined