ZMP
dhx38
Ensembl ID:
ZFIN IDs:
Description:
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Source:RefSeq peptide;Acc:NP_957170]
Human Orthologue:
DHX38
Human Description:
DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:HGNC Symbol;Acc:17211]
Mouse Orthologue:
Dhx38
Mouse Description:
DEAH (Asp-Glu-Ala-His) box polypeptide 38 Gene [Source:MGI Symbol;Acc:MGI:1927617]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa30637 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa45302 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa27096 | Splice Site, Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa30637
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076056 | Nonsense | 355 | 1258 | 8 | 27 |
ENSDART00000128289 | Nonsense | 355 | 1258 | 7 | 28 |
Genomic Location (Zv9):
Chromosome 7 (position 69813694)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 67536363 |
GRCz11 | 7 | 67759715 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACGTACTAACTAGTAGTTTCATGTCCAAACAGCAAGCGGATCGAGACTG[G/A]TACATGATGGATGAAGGTTATGACGAGTTTCACAACCCACTGACATCCAG
Long Flanking Sequence:
GAGGGAGGTGTCGCGGACTTAACTGAGGACGCGGGTGGTAAGGGAGGAGTTGCGGATGCTGCCCTCTCTATACTGCCGCCCTAGGCGGCCGCCTAGGTCGCCTCTATGGACGCGCCGGCCCTGTGTGTTAGTCCAAAATGTACCACTAAAGCAAATCATAAACAATAATAGCAAAGAGGTTAACTAATTTACATATTATTATCAAGTAAATGAATAAATAAAAACATAGAGGTAAAGAAAAAAGAAACATTATACCAAATATAAGCACTAATATTGTATCTAAATAGTCACAAAGCCTCTATAAATAACATACAACAAAATAATATATTTTTCAGACCACAGCACAATCCTATAATGGTTTACTTTATAACTAATTGCACTCAACACAGACCCTGATGCATTCACATTTTGTTAGCAAAACTGGAATCCATGTTTAAGCTGATATTCTAATACGTACTAACTAGTAGTTTCATGTCCAAACAGCAAGCGGATCGAGACTG[G/A]TACATGATGGATGAAGGTTATGACGAGTTTCACAACCCACTGACATCCAGCTCAGACGAATATGTGAAGAAGCGGGAGCAGATCCTGCAGAAACAGACCCAGAAACGCATCTCGGCACAGAAAAGACAAATCAATGAGGTGACAATACACATCCTCACACATCTGTACAGATCCTCACACATCTCATACTCACTCAACTGTCGCTTTCTCTCCAGGATAACGAACGCTGGGAGACGAACCGCATGCTCACCAGTGGAGTGGTTCAGCGTCTGGAGGTGGATGAGGATTTTGAGGAAGACAACGCAGCCCGAGTTCATTTACTTGTGCATAACCTTGTGCCACCCTTCCTCGATGGGAGGATTGTCTTCACTAAACAGGTACTACAGTGGCCGAGAGAGCTAGGTTAACTAGACTAGTTATTTAAGCATGTCATTGGACAACAGTGTTTTTTTTCTATAGCCAATAAAAAAAAAAAACAATTCTTAAGGGGGATAATACTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa45302
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076056 | Nonsense | 1152 | 1258 | 24 | 27 |
ENSDART00000128289 | Nonsense | 1152 | 1258 | 23 | 28 |
Genomic Location (Zv9):
Chromosome 7 (position 69838524)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 67561193 |
GRCz11 | 7 | 67784545 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAGCGCTTTGTTCGGGATGGGCTACACCCCTGACTACATCATCTACCAT[G/T]AACTGGTCATGACCACAAAGGTACTACTTCCTCCTCAGTCCGTTAATGTG
Long Flanking Sequence:
ACTGTAAATTAGAAATGTCTAATAAAGTGAAAATTAGAATGAAGTGCAATTAGAAATATTAATGTCAATCTTTTGGTTTAACTGTATATGTCTCTAAAAGCTGATGTGCATTATGTCAGCACGTAATTAAGCATATCTAATATTTTAATAACTATGTGTGTGTTGTGGCACAGGTGCGTGAGGTGCGAGCTCAGCTCAAAGACATCATGGTGCAGCAGAAAATGAATCTGATCTCCTGCGGTTCAGACTGGGACGTGATCAGGAAGTGCATCTGTGCTGCATACTTTCACCAGGCTGCTAAATTAAAGGTACATGACCATTTAGCAAATTTGTCAAATAATTCAGTTATATCACTCAGCACAGGATATTTTGCTGACCTGTGTTTGTGTGTTTAGGGAATTGGAGAGTATGTGAATGTGAGAACCGGGATGCCCTGTCATCTGCACCCCACCAGCGCTTTGTTCGGGATGGGCTACACCCCTGACTACATCATCTACCAT[G/T]AACTGGTCATGACCACAAAGGTACTACTTCCTCCTCAGTCCGTTAATGTGTTAGTTAGTTTGAATTACAATTTGCTATAACTGTTGATGCACATGCTCTAATACCATTTGACACCAAGCTGTAGTCAATTCAACTTGTAATATGGAAATGATAAGAAGAAGAATAATATTTAAATAAGCAAACAAACAAATTAATTAATAAATAATTTAATTTAGCACCATTGTGTGGTGAATGCAACTTGTAATATTGCAATAATAAATAAATAAATAAATAAGCAAACTAACAAATAAGCTTATTACTTAATTAAGCACCAGGCTGTGGAATTCTACTTGTAATGTTGAAATATTGAAAAACTATAATAATAATAATAATAATAATAATAATAATAATAATAGTAATAGTAATAATAATAATAATAATAATAATAAATAAGCAAATAAACAAATGCATTATTTCATTAATTAAGCACAAAACTGTGGTGAATTCAACTTGTAATATTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa27096
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000076056 | Splice Site, Nonsense | 1190 | 1258 | 25 | 27 |
ENSDART00000128289 | Splice Site, Nonsense | 1190 | 1258 | 24 | 28 |
Genomic Location (Zv9):
Chromosome 7 (position 69840728)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 67563397 |
GRCz11 | 7 | 67786749 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGAGCTGGGACCAATGTTCTACAGCATCAAACACGCAGGGAAGAGCAGA[C/T]AGGTGCGCAAATTCAAATCACACCCAACACTTAATAAGAGTGTGCAGTAT
Long Flanking Sequence:
TTTACTATTTGAGTCATTGCAGAGATGTATGGATGCAGTCCTCCAAGCTTATGGGAGTCATACACAATATTAAATCTTTTTCCGCTGCAGCATGACTTTTTATTCTATAATGTACATTATTTCTGTGTAGTGACAAGATTTTTGTCTAAGCAAAGTCAGACCTTACTGTCCTGATTAAATTATTAGAAATCAAGGCATGATCATGTTTTATTTTGGTAAAATAAGTGTAATCTAGAGGCATTTGTCTTTCATATAAGCCACTTCTGATACCAAGTGATCGACTAGAAGTCAAGTTATTATTTGTTGTTCCTAAAGCTTGGCTAGGCAACAAGACTTTAGTCAGGTAGTGCACTATGGAGTCCTGGTGATCATTGATTTGTTGACGTGTGTGTATATTTGTGTTTCAGGAGTACATGCAGTGTGTGACGGCAGTGGATGGTGAGTGGCTGGCTGAGCTGGGACCAATGTTCTACAGCATCAAACACGCAGGGAAGAGCAGA[C/T]AGGTGCGCAAATTCAAATCACACCCAACACTTAATAAGAGTGTGCAGTATTCATCACCTGCATTGTTTTAACAATGTGCCAGCTGATTATGAAGTGTCACTTAATTTGGGGGAATAAAGCACACATCTTGAGAGCCCAAAAGCATTCACTGCACGATAAAGCCTATTAGAATGTTATGAAAGCGAACAAATTAATTTCACCGAAGTAAGTATATAATATTCCTGAATATCAGTATGTTGGCCTGATTGCATAATTGTTGTGGATTTAAGATTACAGTTCAACAAATAAGAGGTCAGAAAGCTACATTCTAGGATAACACTTCAGATTAATTAACAATTCATACCATTTACAACTGGCTTATTATCTGCCTGTTATTAAAATATTAACTGTTTATCAGCACTTATAAAATATTAACTTATTCTATTTCCTTAATCCTACCCAATACCTAAACAAAACTACTACCATACTAAGTATTAATAGGCAATTAATTGGTAATTTAT
Associated Phenotype:
Not determined