ZMP
zgc:110196
Ensembl ID:
ZFIN ID:
Description:
Transmembrane protein C3orf1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q568N3]
Human Orthologue:
C3orf1
Human Description:
chromosome 3 open reading frame 1 [Source:HGNC Symbol;Acc:1321]
Mouse Orthologue:
4930455C21Rik
Mouse Description:
RIKEN cDNA 4930455C21 gene Gene [Source:MGI Symbol;Acc:MGI:1922139]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa18698 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa10411 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa18698
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000075502 | Nonsense | 121 | 292 | 3 | 8 |
| ENSDART00000075502 | Nonsense | 121 | 292 | 3 | 8 |
Genomic Location (Zv9):
Chromosome 1 (position 27787274)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 28053022 |
| GRCz11 | 1 | 28856374 |
KASP Assay ID:
2259-0654.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCAGGCATGCTCGTCAGAGGTTTATCCAGTGCAGCCAGGCTGAAATTTA[T/A]CGAAACAGAGTGGATGCGGTGGTAAGTTACAGGACAGAGCCTGAACATTA
Long Flanking Sequence:
CAATGATCCATTTGCCAGTGCACACACAAACTCAAAAAATTCTGATCCCTGAAATAATCTGTAAGATGGCAAACTTTTTTTTATCTAGACAAAGTATTTTTTTTAAATGGCTAAAATTGTGGTGATTACAGCCTAATTTGTTGTCTGAAATAACTACACAATTTCTCTAATAACCTGTAGACTGTTGTTGTTGCAGTCTGTTTGTGAGATGAAATCTGGTATAAGATGGGGACAGCTGCAGTTGGGGACATGATGTCAACACCTGGGACTTCCCAGGCTTCTGGTTACCCTATTGTACTCTCAATATCAGAGACAGTCATATGTGTGCATTTGCCTTTCTATTTCTACTCTCTAAACAGTGAAGGTCAGTACACAGAGGAGTTGAGAAATGTAGTAAAAAGTGGTATTGCTTCAGCCATAGTGGGGATGATCTATGGAGGCCTACCAGGAGCCAGGCATGCTCGTCAGAGGTTTATCCAGTGCAGCCAGGCTGAAATTTA[T/A]CGAAACAGAGTGGATGCGGTGGTAAGTTACAGGACAGAGCCTGAACATTATTTTATTTTTTTGTTGTTGTTTTTTGCATTTATACAGACATCAGAAGCCTGTATCATAATGTGGGTTGAACGGACTACTATATAACCTTTTCTTTTTGTCCAATCAGCGTGCAGCCCATAATGCAGCTATTCGTGGTTTTTTGCGATTTGGCTGGAGATGGAGCTGGAGGGTAGCAGCTTTTGTGACCCTGTTTAAGTAAGTTTATATATTGCAAGTTTTAAATCCATAAAAAGTATAATGTAAAGATGTACAGTGCTAGAGCCTTTTATATAAATATTATTTTGTGATATATTGTTTCAGTTTAGTACACTGACAAAGCAATTTTGTAGCTAAATTAGTCGTTAACCTAATGTTTGGAAACAAAGTCTGAAATGCTTGATTATGTACATATAGAATTTATTGTTAGATTATAATCAGTGGAGTGTGAAAAAAAATTACCCAGGACATCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10411
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000075502 | Nonsense | 121 | 292 | 3 | 8 |
| ENSDART00000075502 | Nonsense | 121 | 292 | 3 | 8 |
Genomic Location (Zv9):
Chromosome 1 (position 27787274)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 1 | 28053022 |
| GRCz11 | 1 | 28856374 |
KASP Assay ID:
2259-0654.1 (used for ordering genotyping assays)
KASP Sequence:
GCCAGGCATGCTCGTCAGAGGTTTAWCCAGTGCAGCCAGGCTGAAATTTA[T/A]CGAAACAGAGTGGATGCGGTGGTAAGYTACAGGACAGAGCCTGAACATTA
Long Flanking Sequence:
CAATGATCCATTTGCCAGTGCACACACAAACTCAAAAAATTCTGATCCCTGAAATAATCTGTAAGATGGCAAACTTTTTTTTATCTAGACAAAGTATTTTTTTTAAATGGCTAAAATTGTGGTGATTACAGCCTAATTTGTTGTCTGAAATAACTACACAATTTCTCTAATAACCTGTAGACTGTTGTTGTTGCAGTCTGTTTGTGAGATGAAATCTGGTATAAGATGGGGACAGCTGCAGTTGGGGACATGATGTCAACACCTGGGACTTCCCAGGCTTCTGGTTACCCTATTGTACTCTCAATATCAGAGACAGTCATATGTGTGCATTTGCCTTTCTATTTCTACTCTCTAAACAGTGAAGGTCAGTACACAGAGGAGTTGAGAAATGTAGTAAAAAGTGGTATTGCTTCAGCCATAGTGGGGATGATCTATGGAGGCCTACCAGGAGCCAGGCATGCTCGTCAGAGGTTTATCCAGTGCAGCCAGGCTGAAATTTA[T/A]CGAAACAGAGTGGATGCGGTGGTAAGTTACAGGACAGAGCCTGAACATTATTTTATTTTTTTGTTGTTGTTTTTTGCATTTATACAGACATCAGAAGCCTGTATCATAATGTGGGTTGAACGGACTACTATATAACCTTTTCTTTTTGTCCAATCAGCGTGCAGCCCATAATGCAGCTATTCGTGGTTTTTTGCGATTTGGCTGGAGATGGAGCTGGAGGGTAGCAGCTTTTGTGACCCTGTTTAAGTAAGTTTATATATTGCAAGTTTTAAATCCATAAAAAGTATAATGTAAAGATGTACAGTGCTAGAGCCTTTTATATAAATATTATTTTGTGATATATTGTTTCAGTTTAGTACACTGACAAAGCAATTTTGTAGCTAAATTAGTCGTTAACCTAATGTTTGGAAACAAAGTCTGAAATGCTTGATTATGTACATATAGAATTTATTGTTAGATTATAATCAGTGGAGTGTGAAAAAAAATTACCCAGGACATCA
Associated Phenotype:
Not determined