Busch Lab

ZMP

zgc:136337

Ensembl ID:
ENSDARG00000052896
ZFIN ID:
ZDB-GENE-060616-45
Description:
retina specific protein PAL [Source:RefSeq peptide;Acc:NP_001036218]
Human Orthologue:
LRIT1
Human Description:
leucine-rich repeat, immunoglobulin-like and transmembrane domains 1 [Source:HGNC Symbol;Acc:23404]
Mouse Orthologue:
Lrit1
Mouse Description:
leucine-rich repeat, immunoglobulin-like and transmembrane domains 1 Gene [Source:MGI Symbol;Acc:MGI

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa14614 Nonsense Available for shipment Available now
sa16203 Nonsense Available for shipment Available now

Mutation Details

This allele has been removed from public view.

Allele Name:
sa2668
Status:
Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
n/a
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000127706 Nonsense 191 654 2 4
Genomic Location (Zv9):
Chromosome 12 (position 50586186)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 48953030
GRCz11 12 48974559
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGCTGATGTCCTGGTTCTCCCCGAARCCTCCATTGGACGCTGAGGGCTCC[A/T]GAATGATTCTGGGTGAGTGTTTCTGCRCCGCTGWCATTGCTCTAGACTCT
Long Flanking Sequence:
AGAATCTGCTCATGGACAGCAGCAGGGTTTGACTGTGTCATGTGTTCAACAGGAGTGTTCTGTGCAATGACCCCGATCTCACCGACATCCCGGACAACTTTCCCCTGGACGCCTCCAAACTGCGCATCGAGAAGACGTCGCTCAGCCGCATCTCCAGCGCCCCCTTCCAGCAGCTCAGCAGCCTGGAGTACCTCTGGATCTCCTTCAACTCGCTCTCCTCCATCAGCCCGGACACTTTCCGTGGACTGTACGCTCTGGATGAGTTACGGATGGATGGGAACGTTCTCACTTCTTTCCCGTGGGAATGTCTGCTGGACATGCCCAGCCTGCGGCTTCTGGACTTGCACAACAATAAAATCAGCAGCATCCCGGCAGAAGCGACGCTGTACATCCGGAACCTGACCTACCTGGACCTGTCCAGCAACAGCCTGACTACAGTTCCACCGGAGGTGCTGATGTCCTGGTTCTCCCCGAAACCTCCATTGGACGCTGAGGGCTCC[A/T]GAATGATTCTGGGTGAGTGTTTCTGCACCGCTGTCATTGCTCTAGACTCTTCTCTCTGACAGGTGAATAACCCGACTCTCTGTTCTGCACACAGGTCTGCACGATAACCCCTGGCAGTGCGACTGCCGCCTGTTTGACTTGGTGCAGTTCCAGAAGTTTCCCTCGTCCTCTGTGGCGTTCATCGATACGGGCCTGCGCTGTGCTGAGCCGGAGAGTCTGTCCGGGGTTCTGTTCTCAGACGCGGAGCTGCGCAGGTGTCAGATCCCCCGCGTGCACACGGCCGTGGCCCGAGTCCGCAGCTCCATCGGGAACAATGTGCTGCTGCGCTGCGGGACCATCGGTGTGCCCATCCCAGAACTTAGCTGGGCCCGAGCTGACGGCAAGCCCATGAACGGCACCGGTATGTTAGACCTGCGGCCCGCATACTGCGATACACACCCTCAGAGCAGCCGTGCATTGATTAATGAAGAATGTGGATGTGTTGCTGATGTGTTGAGTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14614
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000127706 Nonsense 419 654 4 4
Genomic Location (Zv9):
Chromosome 12 (position 50587199)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 48954043
GRCz11 12 48975572
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCCAGATCGAGAGCTACAGCRTTTCAGCAGACGCATCAAAGCYGAAGCCA[A/T]AGCCAAAGCCAACAGCGCCCCCTGTGGGGCAGACGGAGCCRGTGGCGCTG
Long Flanking Sequence:
GAAGAGTGTGTGTGTGAGAGTGTGTGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTTGTCTGTGATGGCTGTGTGCAGCTGCAGAGCTCCTACTAAAGTCAGTGCTCTCTCTGTTTTGCTCCTAGTTCAGCAGGAGGTGTCCAAAGAGGGCATCATCTGGTCCATCCTCAGCGTGCCCGCCGTCTCCTACCGCGATTCAGGAAAATACGTCTGCAAAGCCACCAACTTCGTGGGCAGCGCCGATGCCATCATCTCACTTGTTATTTCTGATACGTGGCAGATCGACGAAGCGGTGGCCAAGAGAAGCCACGGGAAGAAGAGCGGAGGCTTCGGGCGCGCGGCGTATCAGGAGAAGCTGATCGCCAGATACGTTCCTCCGTCCACCTCGGCCGCTGTGCCGATCATCGAGCCACTGAACTCTCCGCAGGGCTCGTCCTCCGTCCAGATCGAGAGCTACAGCGTTTCAGCAGACGCATCAAAGCTGAAGCCA[A/T]AGCCAAAGCCAACAGCGCCCCCTGTGGGGCAGACGGAGCCGGTGGCGCTGCAGAGGGATGTGCTCAATAACCTGGAGCCGAACGCCTCCTCGCTGCAGCAGGGTCCCGAGCGCCGCGTGGTGCGCTCCGTCAAGGTCATCGGTGACACCGACCACACGGTCTCGCTGAACTGGCGTGCGCCCACCGCCACCAACACCACCTCCTTCAGCGTGCTGTACGCCGTGTTCGGGGAGCGCGACATGAGGCGCATCAATGTCGGCCCAGGCAAGAACCGCATCACCATTGAAGGCCTGGTGCCCAAAACCAAGTACATCGCCTGTGTGTGTGTGAAGGGGCTGATCCCCAAGAAAGAGCAGTGTGTGATCTTCTCCACGGACGAGGCGGCGAGCGCCAGCGGCACACAGAAGCTGATTAATGTGGTGGTGATCACGGTGGCGTGTGTGATCGCCGTGCCGCTGACGCTCATCGTCTGCTGCGGAGCGCTGAAGCGGCGTCTGCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16203
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000127706 Nonsense 590 654 4 4
Genomic Location (Zv9):
Chromosome 12 (position 50587712)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 48954556
GRCz11 12 48976085
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCATCGTCTGCTGCGGAGCGCTGAAGCGGCGTCTGCAGAAGCTGCTGGGC[C/T]GAAAGTCCAAAGACATCCAGGACTCCTATGTGACATTCGAGACGCTGCCG
Long Flanking Sequence:
CAGCGCCCCCTGTGGGGCAGACGGAGCCGGTGGCGCTGCAGAGGGATGTGCTCAATAACCTGGAGCCGAACGCCTCCTCGCTGCAGCAGGGTCCCGAGCGCCGCGTGGTGCGCTCCGTCAAGGTCATCGGTGACACCGACCACACGGTCTCGCTGAACTGGCGTGCGCCCACCGCCACCAACACCACCTCCTTCAGCGTGCTGTACGCCGTGTTCGGGGAGCGCGACATGAGGCGCATCAATGTCGGCCCAGGCAAGAACCGCATCACCATTGAAGGCCTGGTGCCCAAAACCAAGTACATCGCCTGTGTGTGTGTGAAGGGGCTGATCCCCAAGAAAGAGCAGTGTGTGATCTTCTCCACGGACGAGGCGGCGAGCGCCAGCGGCACACAGAAGCTGATTAATGTGGTGGTGATCACGGTGGCGTGTGTGATCGCCGTGCCGCTGACGCTCATCGTCTGCTGCGGAGCGCTGAAGCGGCGTCTGCAGAAGCTGCTGGGC[C/T]GAAAGTCCAAAGACATCCAGGACTCCTATGTGACATTCGAGACGCTGCCGCCGGGCACCAAAACCAAAGGGCTGGAGGGAGAATTCCTGACCCGACTGAACCCAGACGAGTCCAACCGGCTGCTGTCCGCACGCTCTAGCGTCGACTCCGAGGCCACGGCGCGTACTGAAGGACAGCCCAATGAGTACTTCTGCTGATGGACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAGCTGCTGAGAGAAGTCTCAGTGTTTAAAAGGGAAATGGATCATCTGTATTCTGTGTTTGATCAGAGCGTGCACTTTTCCAATGATGCGGTTCATCATTGCTTCATTTCTCCAACACAGAACATTATCAAGCGCAGCACCTAATACCCATCTGTCTGATACAGGGCGAGAGTGAGATGTGTGTTGGGAGTGTAAGGGAGGCTAGTGATGC
Associated Phenotype:
Not determined