Busch Lab

ZMP

khdrbs1a

Ensembl ID:
ENSDARG00000052856
ZFIN ID:
ZDB-GENE-000210-25
Description:
KH domain containing, RNA binding, signal transduction associated 1a [Source:RefSeq peptide;Acc:NP_
Human Orthologue:
KHDRBS1
Human Description:
KH domain containing, RNA binding, signal transduction associated 1 [Source:HGNC Symbol;Acc:18116]
Mouse Orthologue:
Khdrbs1
Mouse Description:
KH domain containing, RNA binding, signal transduction associated 1 Gene [Source:MGI Symbol;Acc:MGI:

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa16353 Nonsense Available for shipment Available now
sa22375 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa16353
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000074787 Nonsense 283 370 6 9
ENSDART00000125633 Nonsense 283 369 6 11
Genomic Location (Zv9):
Chromosome 13 (position 45638160)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 44881659
GRCz11 13 45018563
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CACCAACCCAAGCYGCCAGAATGACACCTGCAGCCGGACTCTCCCACCAA[C/T]AGGCCAAACCTGAARCTTWCGGAGAATATGTGAGTCAATATAYATAGCAC
Long Flanking Sequence:
CCATTAATTATAATAATACAATTTTACTTATTTCAGGTGGAAGGTATGGATGAGATGCACCCTGATGCTTTCATGGATCCAGGTTTTCTGAACGGCGCTCAGGATATGTCTGGCCATGGCAGAGGCATGCCAGGCAGAGGACGTGGTGGCCCTCCCCCAATGGGTGCTAGGTGAGACATTAACAGATGCATTTTAACATATAATTTCATTTTTAAATGTATCTGCAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCCCCTTCATTTGTAGTAATCCCATTTTGTTGTCTTTAATAGGGGTCGTGGTATGCCTCCTCGTGGAGCACCGCGCGGAGGAGCACCAAGGGGAGGTCCTGGCCGTGGAGCTGCAGCACGTGGAGCCCCAGCAGGACGAGGAGGACCTCAGCCCCCCACCCCAACCAGAGGGGGAGCAGCATCCCGCTCAAGGCCACCAACCCAAGCTGCCAGAATGACACCTGCAGCCGGACTCTCCCACCAA[C/T]AGGCCAAACCTGAAACTTACGGAGAATATGTGAGTCAATATACATAGCACCAGCAACTGCCCCTCAGCTGTTATTTACACTATTTAAGTAGATTGGGGATTATTGTAATTTTGATAAATGTATTAAATATTGTTTATTCAGCCCCAATGCATTTCATGCTGTCCATTTCAAATGTTTCAAGTTTATGTAGTTTTATTTTATATCATTACTTTAATGCACCCTAGGATTTGGTTAAGTTTTCACAAATGAGCATTAGCACGCAGTTTCCTGATCATCAAATCCTCTTTAAATTCATGTTAAGGGTTTGTACAATACATGCTGCTCTATTTAAGCTGAATTTTAAGCTATATTTTGCAGTTTACTCCAGACTTTTGAATTGTAATATATATTGATGTGTAAACTCTAAAGTTTTGTATTTAAAGGCTTGTTAAGTAACTACTCTTGGGTTCAGACAGTAATTTAAGACTCAATGTAAATGCTTGCTTTTTTTTTCCACCTTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22375
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000074787 None None 370 9 9
ENSDART00000125633 Essential Splice Site None 369 None 11
Genomic Location (Zv9):
Chromosome 13 (position 45635655)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 44879154
GRCz11 13 45016058
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTTGCCTGCGCAGCCTCCTTCCCTCGTAACCTCTTGTTATCATCTAAAG[T/C]AATTCTAGTTGTTATTTTTGTATGCTGTTTTGGTTAACACACTCCTTTTT
Long Flanking Sequence:
GCTTCCATTTTAATCATCCGTTTCCATCAATTGATGCATTCAAAGTTTAACTCGGCGGGGTCATTGTGTGTCAAGTGCTATCATATATTTTTGTTTTGGGGAAAAGCTTCATGTTTGCTGTTTGTTTCCACAGAGATACGGAGTATTATGACTACGGCCACGGAGAGGCACAGGAGAGTTACGAGTCTTACAGTAAGTCATGTTGTGTCAGTGTCTTGGCTAACTTTAGCCTTGTTTTAGTGTTAATGTGCTCAAAACGACACTCTTACTTGCTCACAAGCTTTCCATGTGTTAAGGTAATTTAAAATGTTTTTTTTTTTTATCAGCAGAAGATGACTGGGAAGGTGGCGCTTGGGGTGGTGCTGGTGGAAAAGCCCCTACAGCTCGCCAAGGAAAATCGTTTCGGGAACACCCTTATGGCCGATACTGAGAGTGCTGTCGGCTCACTGCTGTTGCCTGCGCAGCCTCCTTCCCTCGTAACCTCTTGTTATCATCTAAAG[T/C]AATTCTAGTTGTTATTTTTGTATGCTGTTTTGGTTAACACACTCCTTTTTAAATATTCTGAATCCCAAGTAGGACGATGACCATTCATAAGTTCAGTACGACACGTTTTAGACTTGCGGTTTATATGATGGATGTGCTTATTCTCTTGGCATTTTGTTTTGCAATTTTATTGTTTTCTTGCCGGTTTTGTTTTTTATTATTATTATTTTTTTAATGGATAAGTGTTTCTTCTTTGGAAAAAAGAAATAAGATACCTGCTAAGACAATTAGCTGATGGCCATATGTAAATGACTTGCTAAAAAAAGGAAAAAACTGCCTGTTAATGTCACTTCTATTCCAAACGCGCTTCAAGGCAAAACAAAAAAAAAGGAAAAATTGAAGGATGCATAAAAATATTAGTTAATTTTCAACCCAACTTGTTTTAAATTTTGATGAGGTAATTTCCTGTTTGATTATAGTCGTAAAATTCAAACTACGCTTCTGCTGATTCGTTTTGTTAA
Associated Phenotype:
Not determined