ZMP
si:dkeyp-101g1.3
Ensembl ID:
ZFIN ID:
Description:
calpain 1, large subunit [Source:RefSeq peptide;Acc:NP_001138267]
Human Orthologue:
CAPN1
Human Description:
calpain 1, (mu/I) large subunit [Source:HGNC Symbol;Acc:1476]
Mouse Orthologue:
Capn1
Mouse Description:
calpain 1 Gene [Source:MGI Symbol;Acc:MGI:88263]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa43862 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa43861 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa43862
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105099 | Nonsense | 503 | 700 | 11 | 19 |
Genomic Location (Zv9):
Chromosome 22 (position 26898860)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 26287716 |
| GRCz11 | 22 | 26307613 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCACTTTTGAGCCTGGAAAAGAGGCTGACTTCGTCCTGCGAGTATTCACT[G/T]AGAAACAGTCAGAAACTCAGTAAGTGACTAAACGATTAAAACTAAAATAA
Long Flanking Sequence:
CATACAATGATATCACGTCATTTAACAACTTTTAGTAACACATTGCTTCACCTTTTGCAAATTCAAAACCAGTAGTTGGCAACAGTGTGATTGGGATTAGAAGGTAAGTTAGGTTAAGGTTAATTATGCAAAAATAAATTTTAATTACTATAGTACATACATGGAACATGTAACAAGGGCACTTTAAAATGAAGTGTTACCCAATTATTTTTCAAATCTGTTTGGTGATGCAGCAGTTTTATTTTTGAATGTATTGTAAAACATGAGGTTAATAATTTAAAAAACTTTTACTTTTCTTCTGTTTTTAGTTTCTTGGCTCCCAGAATGTTCACCTGAAGAAGGATTTTTTCTTGCGTCACTCGTCCTGTGCACGCTCCGAGACCTTTATTAATCTGCGAGAGGTGAGCACGCGACTGAGGCTGCCACCGGGCGAGTATCTCATTGTCCCTTCCACTTTTGAGCCTGGAAAAGAGGCTGACTTCGTCCTGCGAGTATTCACT[G/T]AGAAACAGTCAGAAACTCAGTAAGTGACTAAACGATTAAAACTAAAATAACAATAGTATTATAGATAAAATATTTTTAAAAATGACTACCATGTGGGTTTTGTATTGTGCAGCCTTATTTTACGACATATTTTGCTTTTTCTTTTATTTTTAGAGAAATGGATGATGAAATTTCATTTAACCTGGAAGATGAAGTAAGGACTTGTTATTATTGTGGATGTGGAAACTAAATGCATGTATGTATGTAAATATATAGATTTATATACTGTACAAATCAACTACCTAGAAAGGCTCTACTACATACCTAGCAACCCCTTAGCAACACAACAGATATACTTTTAACACTTTAATACTTTCTCTCAGAACACATTAATAACTAAACAAAGTCAGCACATTAAACTTTTCAAAACAAAGCAATACGATCATTTAGAACAACATAGCAACATAATAAATCCCTTAGCACACTAAAGCCCCGGTCAGATAACACGATTTTTATTGTTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa43861
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105099 | Essential Splice Site | 585 | 700 | 15 | 19 |
Genomic Location (Zv9):
Chromosome 22 (position 26895267)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 26284123 |
| GRCz11 | 22 | 26304020 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGATGGGTTCAGTTTGGAGTCTTGTAGGTGCATGATCAACCTGATGGAC[G/A]TATCCTAACATTCTGACTTTTAAAAACGTATAAATAGCATATATACTTTC
Long Flanking Sequence:
GTTTGATTAGGGTTGGAGCAAAACTGTGCAGAGCAGCGGCCCTCCAGGAATCCAGTTTAAGACTCATACCTTACCACAATATTCAGATTAAAAATGAAACGAAATGTATTATAATACAGTGTATGGACGTCTGTTGTATCTACAGGAGGCAGTCTCAGAGGAGAACATTGATGCCTCGTTTAAAAAGATGTTTGCTCAGCTGTCTGGAGAGGTGTGTTTGTATCTGTGTGATATTGTTAATAACATTGTGAACTGCGTTATATTAAAAGTTCATCTAAACTTGTAGGACATGGAGATTTCAGTTCACGAGCTCCGGACCATTCTGAACCGAGTGATGACAAAACGTAAGCTCAGAGGACGTTTTTAAAAAATTCAGATCTGATGTGTTTACATTTTTGTGCTCGATAATTACCTCTGCTCTCCTGTGTTCTGCAGACCGAGACTTAAAGACAGATGGGTTCAGTTTGGAGTCTTGTAGGTGCATGATCAACCTGATGGAC[G/A]TATCCTAACATTCTGACTTTTAAAAACGTATAAATAGCATATATACTTTCACCTTGCTAGTACCACTTTTTGCATTCAGAAGAGCATTTGGGGCACAGATTCCAGAATGTAATGGAAACATTCCTCAAAGATTTGAGTCCAAATTGCACTGACAACATAAGATTCAAATTCCAATTCTTCCAGTGAACTGTTTATACAAGACAGGTTTGCCAAGTCAAGTTAAGTATTATTGTCCGTCTTTAAGGTCACAAGGTACAGTATAGTGAATTGTTGTGTCTCACAGGACCACGGTGCTACATACTAATGAAACATTTATTCATTGATTCATTTTCTTGTCTGCTTAGTCCCTTTATTAATCCGGGGTCGCCACAGCAGAATGAACCGCCAACTTATCAAGCACAATTTTACGCAGCGGATGCCCTTCCAGCCGCAACCCCTCTCTGGGAAACATCCACACACTCATTCATACACACACTCATACACTATGGACAATTTAGTCC
Associated Phenotype:
Not determined