ZMP
arl13a
Ensembl ID:
ZFIN ID:
Description:
ADP-ribosylation factor-like 13A [Source:RefSeq peptide;Acc:NP_957112]
Human Orthologue:
ARL13A
Human Description:
ADP-ribosylation factor-like 13A [Source:HGNC Symbol;Acc:31709]
Mouse Orthologue:
Arl13a
Mouse Description:
ADP-ribosylation factor-like 13A Gene [Source:MGI Symbol;Acc:MGI:1921698]
Alleles
There are 8 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa14291 | Essential Splice Site | Available for shipment | Available now |
sa10478 | Nonsense | Available for shipment | Available now |
sa42434 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa42433 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa14291
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000074455 | Essential Splice Site | None | 409 | None | 10 |
ENSDART00000138232 | Essential Splice Site | 7 | 434 | None | 10 |
The following transcripts of ENSDARG00000052575 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 14 (position 42784086)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 14 | 40941191 |
GRCz11 | 14 | 41308445 |
KASP Assay ID:
2260-7844.1 (used for ordering genotyping assays)
KASP Sequence:
AATGTCTCTGGAGAAACAAACAAAAACGCATGGAKTCTGACATACTACTG[T/A]RAGTAATGAGTWTATTTAATGTCATTTTGTTGTTTAACTWCTTCATATTA
Long Flanking Sequence:
ATAATAATAATAATAATAATAATATTAGTGGATAAGCAGCAGATTTTAGGAGCAGATACAGGTGAGACTGCGTCACTTGAGCGCTTACCAGTGCTGTGTAAACAACAAATGACGTCACGCTATGATGCTATTAACAGTACAGTGCCTCAGACTGAATAGTAAATTCAAAACTTCCCATTTACCTCCAAGCATGTGTGTACAAAGCCTTTCCATGCTTAATTCCTAGAATTTAGGATGTTTACATAGAGCTGACTAATAATAACCTGGCAGACGGCTACATTCGGCCCAGTTTAAGAGACCTAAACCAGCCATTCAGAATGATAGGTGTCGTCTGTGACCATATGATTGGTTGTAAGAATGTGGCGGTGTTTCCTCAGAGCTCCGCCCACATGAGGTGAGGGGATTAGAGGAATAAGTAGAGCCTGATTAGTTTTTAGCCGCCTTGTGCAAAATGTCTCTGGAGAAACAAACAAAAACGCATGGATTCTGACATACTACTG[T/A]GAGTAATGAGTATATTTAATGTCATTTTGTTGTTTAACTTCTTCATATTAATCCTATAAACTATGCTATGTGGATATGTCTGTAATATTCAACATTCATAGGGATGTTTATGAGCATATGTGATTGTGCAGAGGAGTAGACTGACAATTAATTGTTTTTATAGTCTCCAATTTCAGATATACTCTGAAGTTTTTGTTCCTGTAAACAGTTAGCAATCTGCATTTATAATGTATTCTAGCATGTTTACATTCAGTATGTTTGATCAGATATACAATTTTAAACTAACAGTTGTGTCATCCTTAATTATATACCATGTTTTATTGTGTTGAAACAATGATTGAGCTTTATTTAAAGAAATAAGCATAAGTGGTAGGTGGGCTGTGGCTGTTTATGCTACTCAGATAAAGGGGTCATGTGTTCAGATCGGGAACAGCATAATTGACTCAGACTATTCTGTAAAGGCTTAAAGGACTGAACAGATGCACAGGGAATGATTCACC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10478
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000074455 | Nonsense | 226 | 409 | 6 | 10 |
ENSDART00000138232 | Nonsense | 251 | 434 | 6 | 10 |
The following transcripts of ENSDARG00000052575 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 14 (position 42775991)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 14 | 40933096 |
GRCz11 | 14 | 41300350 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TAGGCCCAGAGGAAAAGGAAAGGAAGGRAAAAATTGAGAAGAGCCGGAAC[A/T]AAACTAAAGAWGAGAAGTAAGGGCTGATWAATATGTCAGTCAGGGCTAAA
Long Flanking Sequence:
AACAAAAAGCATAGCCATTGTAGACTGAAAGGTACAAACAACCAAATTGGTCTAAGCCATATTCGTTGTGACTAGCTAATTTTGAACCATATCTGTATCTCATAACAGGCTGGCAAATAAACAGGACAAAATGAATGCTCTGCTGGGAAATGAGCTCATTGAAATTCTCTCCCTAGAGAGGCTGGTCAACCAGAGCCGGTCGCTTTGCCATATTGTGAGTACTTTGAGCCAGTAAACATCATATATCTCCAGGGAACTGACAACATGCCAGTGTTAATGTTTATATTGGCAAATCTCTTCTCAATCTACAGGAGCCATGTTCTGCCTCAATGGACCTCCGTCGCTGGTCAGACAGAAAAACCCTACGGGGTCTGAGATGGCTACTGCGAGCTGTGTGCTTGGACTATCCAGACCTCTGTGCCCGCGTGATGAGAGACGGCAGACGACCATTAGGCCCAGAGGAAAAGGAAAGGAAGGGAAAAATTGAGAAGAGCCGGAAC[A/T]AAACTAAAGATGAGAAGTAAGGGCTGATAAATATGTCAGTCAGGGCTAAATGATATTGGACAAATCTAACATTGCGATATTTTTTTATTTTGCGATATATATTATGACATGAATACAATTTCACCAGATGGCTTAATATCTCTATTTGGAAATAAGTTATAATGTTAGATCGATTAGGATGATTCTGCAGTGAGAATCCACCTCCATAAAATAAACTATCTATAAACTTTTTGGGGGTCCCCTGACACATTTTTAATGTGGTCTGTGCGATTTGCAGTGCATTTCTGTATTTGCATGTGTTGCGAGTATCTTCATGCACGTGTTTAGTCAGAGCTTGATGAATTAATGTTTACTATTTGCATCTCCATAAAATCTTATAAACAATCTGTAAACTTTTTTGGGGTCCCTCGACACATTTACGTTGTAATTTGTACTATTTGTAGTGCATTTCTGTATTTGCATGTGTTGTGAGTATTTTCATGCATGACAATCTATAAACG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42434
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000074455 | Nonsense | 315 | 409 | 8 | 10 |
ENSDART00000138232 | Nonsense | 340 | 434 | 8 | 10 |
The following transcripts of ENSDARG00000052575 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 14 (position 42772946)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 14 | 40930051 |
GRCz11 | 14 | 41297305 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAACGAAGCAGAACAGGAGCACAACCAGAAGGATAAAGCCAGCAGTGCAT[T/G]ACTGCCTCCGAAACGTGGGAAGCTGAAACGTAAAGCCAAAGTAAAAGAAG
Long Flanking Sequence:
ATATTCTTTCTCTGTGATGTTACCATTGTGGTGTGGACTGTGTTATTTGAGTGATTTTTAAATGTCAGGGGTGGCCAACCCTGTTCCTGGAGAGCCATCTTCCTGCAGATTTCAGTTGCAACCCATATCAAACACACATGCCTGTAATTATCACGTGGTGTTCAGGTCCTAATTAATTGGTTCAGGTGTGTTTGATATGAGTAGCAACTGAAATCTGCAGGAAGGTGGCTCTCCAGGAACAGGGTTGGCCACCCCTGGTATATGTGCATTGTTATAGTTATAATCTTTGGTGTAAACAGGCCTTGACCTGTCACTTACTTTGCCAATTTACTCCTGGACATCTTAGGAGAACTCTTTCAAAAAGAAGTTAAGCAAAAAGAAGAAGGTGAAGGTTAAAATTAAGAAGGAGAGTCCAAGCAGAGGAGTAAATGAGGAAGAGGAGATTGAAGCCAACGAAGCAGAACAGGAGCACAACCAGAAGGATAAAGCCAGCAGTGCAT[T/G]ACTGCCTCCGAAACGTGGGAAGCTGAAACGTAAAGCCAAAGTAAAAGAAGAAAACTCTGGTTTACCAGAATCCCCCAACAGTGAGCTCTCCAAACCGTCTAAAGGTACTTAGTGACAGTAACTCAAGCTTTTATTTACAGTTGAAGTCAGAATTATTAGCCCCCCTGAATTATTAGGCCCCCTATTTATATTTGACTAGATATTTTTTAAGACACTTTTATACAGCTTAAAGTGACATTCAATGGCTTAACTAGGTTGATTAGATTAACTAGGCTGGTTAGGCTAATTAGAAAATTGTTGTATAATGATGGTTTGTTTTGTAGACTATCGAATAAAAATATAGCTTAAAGGGGCTAATAATTTTGTCCTTAAAATGGTTCATAAAAAAATAAAAGCTGCTTTTATTCTAGCCGAAATAAAACAAATAAGACTTTATCTAGAAGAAAAAACATTATCAGACATACTGGTAAAATTTTCTTGCTCTGTTAAACATTGTTTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42433
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000074455 | Nonsense | 404 | 409 | 10 | 10 |
ENSDART00000138232 | Nonsense | 429 | 434 | 10 | 10 |
The following transcripts of ENSDARG00000052575 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 14 (position 42769362)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 14 | 40926467 |
GRCz11 | 14 | 41293721 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAATAGACCTTTACCGAAAAGCTATTTTGGCTCTCAAAGCCCGACAGGAA[C/T]AGGACATGGTCTCGGGATAGTACAGAAAAAGGATCATGGATGCCATGAAG
Long Flanking Sequence:
ATGTCAGCTCTCACATTAAATCAATCACATTTTCCTAGATGGTAAAGCACTTACATGTTTTCAAAAATGTGAAATTGCATCCTTATGCTTTAAAGTTGTGCCTTTTACAGGAAAAGAGGAGAGAAAGAGGAAAAAAAAGACGGTTAAAGTGAAACGAAAAAACAAGATCAACACGGAGGAAGTTCCTGCTGCGTACACACAGCCTGTTGATCTGTCCAATACTTTCGGTGAGCATTGGTGACTTCCAAACCACTCTTCATTATGATCAGGGCTGCTCTTGGGGTGCAATTTGGCCTTGTGGGAGGAATTTAATAAGTGTTGCTTATTGGTAATATCTGATTTACTACACTGATTTTAAAACAATAAAATAAACAAATGAACTCGATCAACACAGACAGCCCTGATCTGTAGACATGTAGAAAACTAATTGAAAGCAATTTGCCTGTTTCCTAATAGACCTTTACCGAAAAGCTATTTTGGCTCTCAAAGCCCGACAGGAA[C/T]AGGACATGGTCTCGGGATAGTACAGAAAAAGGATCATGGATGCCATGAAGATCTTTGAAGAAAAGCTGAAAAACCACGTATGGAGGTCTTTTACCCACTGGACGATGAACTGAACCCATCTAGAGCTACCAACTAGAGCTACTGTTTTGTAACACTAGAAGGTCAGCATCAATACTTTTTGAGGTAACTTTTATCAAATGATGTAAGTAATTGTATTAAGAATTTGATCAATTATTTAAAAGAAAAATAGTGTTTAATTCAAGGAGAAAAACTTCCTATGAAAGTTAAAATATTGACAGAGTTTTGTGTTCTAATTTGCATGTGACCTAACCTAAAATCAGTCCGTCTGATGGTTTACTTTGGTGTGCAATGCAATGATGTATTTGTCTTTGAATTCAACATGTGTTCTTTACAGGTTTGAATAAGATGCCTACTCCCTCTTTTTTGTAAAATGTTATTTATTTGTACATCTTTCAATCTTTTTAGCCAATTTGTACTTT
Associated Phenotype:
Not determined