Busch Lab

ZMP

arl13a

Ensembl ID:
ENSDARG00000052575
ZFIN ID:
ZDB-GENE-040426-1790
Description:
ADP-ribosylation factor-like 13A [Source:RefSeq peptide;Acc:NP_957112]
Human Orthologue:
ARL13A
Human Description:
ADP-ribosylation factor-like 13A [Source:HGNC Symbol;Acc:31709]
Mouse Orthologue:
Arl13a
Mouse Description:
ADP-ribosylation factor-like 13A Gene [Source:MGI Symbol;Acc:MGI:1921698]

Alleles

There are 8 alleles of this gene:

Allele Name Consequence Status Availability
sa14291 Essential Splice Site Available for shipment Available now
sa10478 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa14291
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000074455 Essential Splice Site None 409 None 10
ENSDART00000138232 Essential Splice Site 7 434 None 10

The following transcripts of ENSDARG00000052575 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 14 (position 42784086)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 40941191
GRCz11 14 41308445
KASP Assay ID:
2260-7844.1 (used for ordering genotyping assays)
KASP Sequence:
AATGTCTCTGGAGAAACAAACAAAAACGCATGGAKTCTGACATACTACTG[T/A]RAGTAATGAGTWTATTTAATGTCATTTTGTTGTTTAACTWCTTCATATTA
Long Flanking Sequence:
ATAATAATAATAATAATAATAATATTAGTGGATAAGCAGCAGATTTTAGGAGCAGATACAGGTGAGACTGCGTCACTTGAGCGCTTACCAGTGCTGTGTAAACAACAAATGACGTCACGCTATGATGCTATTAACAGTACAGTGCCTCAGACTGAATAGTAAATTCAAAACTTCCCATTTACCTCCAAGCATGTGTGTACAAAGCCTTTCCATGCTTAATTCCTAGAATTTAGGATGTTTACATAGAGCTGACTAATAATAACCTGGCAGACGGCTACATTCGGCCCAGTTTAAGAGACCTAAACCAGCCATTCAGAATGATAGGTGTCGTCTGTGACCATATGATTGGTTGTAAGAATGTGGCGGTGTTTCCTCAGAGCTCCGCCCACATGAGGTGAGGGGATTAGAGGAATAAGTAGAGCCTGATTAGTTTTTAGCCGCCTTGTGCAAAATGTCTCTGGAGAAACAAACAAAAACGCATGGATTCTGACATACTACTG[T/A]GAGTAATGAGTATATTTAATGTCATTTTGTTGTTTAACTTCTTCATATTAATCCTATAAACTATGCTATGTGGATATGTCTGTAATATTCAACATTCATAGGGATGTTTATGAGCATATGTGATTGTGCAGAGGAGTAGACTGACAATTAATTGTTTTTATAGTCTCCAATTTCAGATATACTCTGAAGTTTTTGTTCCTGTAAACAGTTAGCAATCTGCATTTATAATGTATTCTAGCATGTTTACATTCAGTATGTTTGATCAGATATACAATTTTAAACTAACAGTTGTGTCATCCTTAATTATATACCATGTTTTATTGTGTTGAAACAATGATTGAGCTTTATTTAAAGAAATAAGCATAAGTGGTAGGTGGGCTGTGGCTGTTTATGCTACTCAGATAAAGGGGTCATGTGTTCAGATCGGGAACAGCATAATTGACTCAGACTATTCTGTAAAGGCTTAAAGGACTGAACAGATGCACAGGGAATGATTCACC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10478
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000074455 Nonsense 226 409 6 10
ENSDART00000138232 Nonsense 251 434 6 10

The following transcripts of ENSDARG00000052575 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 14 (position 42775991)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 40933096
GRCz11 14 41300350
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TAGGCCCAGAGGAAAAGGAAAGGAAGGRAAAAATTGAGAAGAGCCGGAAC[A/T]AAACTAAAGAWGAGAAGTAAGGGCTGATWAATATGTCAGTCAGGGCTAAA
Long Flanking Sequence:
AACAAAAAGCATAGCCATTGTAGACTGAAAGGTACAAACAACCAAATTGGTCTAAGCCATATTCGTTGTGACTAGCTAATTTTGAACCATATCTGTATCTCATAACAGGCTGGCAAATAAACAGGACAAAATGAATGCTCTGCTGGGAAATGAGCTCATTGAAATTCTCTCCCTAGAGAGGCTGGTCAACCAGAGCCGGTCGCTTTGCCATATTGTGAGTACTTTGAGCCAGTAAACATCATATATCTCCAGGGAACTGACAACATGCCAGTGTTAATGTTTATATTGGCAAATCTCTTCTCAATCTACAGGAGCCATGTTCTGCCTCAATGGACCTCCGTCGCTGGTCAGACAGAAAAACCCTACGGGGTCTGAGATGGCTACTGCGAGCTGTGTGCTTGGACTATCCAGACCTCTGTGCCCGCGTGATGAGAGACGGCAGACGACCATTAGGCCCAGAGGAAAAGGAAAGGAAGGGAAAAATTGAGAAGAGCCGGAAC[A/T]AAACTAAAGATGAGAAGTAAGGGCTGATAAATATGTCAGTCAGGGCTAAATGATATTGGACAAATCTAACATTGCGATATTTTTTTATTTTGCGATATATATTATGACATGAATACAATTTCACCAGATGGCTTAATATCTCTATTTGGAAATAAGTTATAATGTTAGATCGATTAGGATGATTCTGCAGTGAGAATCCACCTCCATAAAATAAACTATCTATAAACTTTTTGGGGGTCCCCTGACACATTTTTAATGTGGTCTGTGCGATTTGCAGTGCATTTCTGTATTTGCATGTGTTGCGAGTATCTTCATGCACGTGTTTAGTCAGAGCTTGATGAATTAATGTTTACTATTTGCATCTCCATAAAATCTTATAAACAATCTGTAAACTTTTTTGGGGTCCCTCGACACATTTACGTTGTAATTTGTACTATTTGTAGTGCATTTCTGTATTTGCATGTGTTGTGAGTATTTTCATGCATGACAATCTATAAACG
Associated Phenotype:
Not determined