ZMP

arl13a

Ensembl ID:

ENSDARG00000052575

ZFIN ID:

ZDB-GENE-040426-1790

Description:

ADP-ribosylation factor-like 13A [Source:RefSeq peptide;Acc:NP_957112]

Human Orthologue:

ARL13A

Human Description:

ADP-ribosylation factor-like 13A [Source:HGNC Symbol;Acc:31709]

Mouse Orthologue:

Arl13a

Mouse Description:

ADP-ribosylation factor-like 13A Gene [Source:MGI Symbol;Acc:MGI:1921698]

Alleles

There are 8 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa14291	Essential Splice Site	Available for shipment	Available now
sa10478	Nonsense	Available for shipment	Available now
sa42434	Nonsense	Mutation detected in F1 DNA	Not yet available
sa42433	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa14291

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000074455	Essential Splice Site	None	409	None	10
ENSDART00000138232	Essential Splice Site	7	434	None	10

The following transcripts of ENSDARG00000052575 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 14 (position 42784086)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	40941191
GRCz11	14	41308445

KASP Assay ID:

2260-7844.1 (used for ordering genotyping assays)

KASP Sequence:

AATGTCTCTGGAGAAACAAACAAAAACGCATGGAKTCTGACATACTACTG[T/A]RAGTAATGAGTWTATTTAATGTCATTTTGTTGTTTAACTWCTTCATATTA

Associated Phenotype:

Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:

sa19093

Status:

Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

n/a

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000074455	Essential Splice Site	44	409	None	10
ENSDART00000138232	Essential Splice Site	69	434	None	10
ENSDART00000074455	Essential Splice Site	44	409	None	10
ENSDART00000138232	Essential Splice Site	69	434	None	10

The following transcripts of ENSDARG00000052575 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 14 (position 42779314)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	40936419
GRCz11	14	41303673

KASP Assay ID:

2260-7842.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GGCTTGGACAAGGCAGGAAAAACCTCTTGCGTCAGGGGAATGTTGAGAGG[T/A]AATTTAAATGTATATCAGGTTAGCAGAAATGCTGATTTGACTGCAGCTTG

Associated Phenotype:

Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:

sa4572

Status:

Allele not cryopreserved
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

n/a

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000074455	Essential Splice Site	44	409	None	10
ENSDART00000138232	Essential Splice Site	69	434	None	10
ENSDART00000074455	Essential Splice Site	44	409	None	10
ENSDART00000138232	Essential Splice Site	69	434	None	10

The following transcripts of ENSDARG00000052575 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 14 (position 42779314)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	40936419
GRCz11	14	41303673

KASP Assay ID:

2260-7842.1 (used for ordering genotyping assays)

KASP Sequence:

GGCTTGGACAAGGCAGGAAAAACCTCTTGCGTCAGGGGAATGTTGAGAGG[T/A]AATTTAAATGTATATCAGSTTAGCAGAAATGCTGAWTTGACTGCAGCTTG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa10478

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000074455	Nonsense	226	409	6	10
ENSDART00000138232	Nonsense	251	434	6	10

The following transcripts of ENSDARG00000052575 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 14 (position 42775991)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	40933096
GRCz11	14	41300350

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TAGGCCCAGAGGAAAAGGAAAGGAAGGRAAAAATTGAGAAGAGCCGGAAC[A/T]AAACTAAAGAWGAGAAGTAAGGGCTGATWAATATGTCAGTCAGGGCTAAA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa42434

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > G

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000074455	Nonsense	315	409	8	10
ENSDART00000138232	Nonsense	340	434	8	10

The following transcripts of ENSDARG00000052575 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 14 (position 42772946)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	40930051
GRCz11	14	41297305

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CAACGAAGCAGAACAGGAGCACAACCAGAAGGATAAAGCCAGCAGTGCAT[T/G]ACTGCCTCCGAAACGTGGGAAGCTGAAACGTAAAGCCAAAGTAAAAGAAG

Associated Phenotype:

Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:

sa28354

Status:

Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

n/a

Mutation:

A > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000074455	Nonsense	357	409	9	10
ENSDART00000138232	Nonsense	382	434	9	10

The following transcripts of ENSDARG00000052575 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 14 (position 42769732)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	40926837
GRCz11	14	41294091

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CCTTATGCTTTAAAGTTGTGCCTTTTACAGGAAAAGAGGAGAGAAAGAGG[A/T]AAAAAAAGACGGTTAAAGTGAAACGAAAAAACAAGATCAACACGGAGGAA

Associated Phenotype:

Not determined

Mutation Details

This allele has been removed from public view.

Allele Name:

sa28353

Status:

Less stringent filtering
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

n/a

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000074455	Nonsense	380	409	9	10
ENSDART00000138232	Nonsense	405	434	9	10

The following transcripts of ENSDARG00000052575 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 14 (position 42769663)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	40926768
GRCz11	14	41294022

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGAAACGAAAAAACAAGATCAACACGGAGGAAGTTCCTGCTGCGTACACA[C/T]AGCCTGTTGATCTGTCCAATACTTTCGGTGAGCATTGGTGACTTCCAAAC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa42433

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000074455	Nonsense	404	409	10	10
ENSDART00000138232	Nonsense	429	434	10	10

The following transcripts of ENSDARG00000052575 do not overlap with this mutation:

Genomic Location (Zv9):

Chromosome 14 (position 42769362)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	40926467
GRCz11	14	41293721

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TAATAGACCTTTACCGAAAAGCTATTTTGGCTCTCAAAGCCCGACAGGAA[C/T]AGGACATGGTCTCGGGATAGTACAGAAAAAGGATCATGGATGCCATGAAG

Associated Phenotype:

Not determined